RNA–Protein interactions for RNA: ENST00000495755.1

VPS52-221, Transcript of VPS52, GARP complex subunit, human

TSL 5

Gene VPS52, Length 453 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VPS52-221	ENST00000495755	KRAS	P01116	189 aa		5.44	□□□□□ -1.54
VPS52-221	ENST00000495755	SERPINE2	P07093	398 aa		5.44	□□□□□ -1.54
VPS52-221	ENST00000495755	RCVRN	P35243	200 aa		5.44	□□□□□ -1.54
VPS52-221	ENST00000495755	G6PC	P35575	357 aa		5.44	□□□□□ -1.54
VPS52-221	ENST00000495755	MFAP2	P55001	183 aa		5.44	□□□□□ -1.54
VPS52-221	ENST00000495755	UCP3	P55916	312 aa		5.44	□□□□□ -1.54
VPS52-221	ENST00000495755	ERVK-16	P61578	105 aa		5.44	□□□□□ -1.54
VPS52-221	ENST00000495755	TSPAN5	P62079	268 aa		5.44	□□□□□ -1.54
VPS52-221	ENST00000495755	HAGH	Q16775	308 aa		5.44	□□□□□ -1.54
VPS52-221	ENST00000495755	FAM106A	Q4KMX7	169 aa		5.44	□□□□□ -1.54
VPS52-221	ENST00000495755	PHLDA2	Q53GA4	152 aa		5.44	□□□□□ -1.54
VPS52-221	ENST00000495755	LPCAT3	Q6P1A2	487 aa		5.44	□□□□□ -1.54
VPS52-221	ENST00000495755	HSD17B13	Q7Z5P4	300 aa	Predicted RBP	5.44	□□□□□ -1.54
VPS52-221	ENST00000495755	GTSCR1	Q86UQ5	136 aa		5.44	□□□□□ -1.54
VPS52-221	ENST00000495755	SNX29P2	Q8IUI4	249 aa		5.44	□□□□□ -1.54
VPS52-221	ENST00000495755	LAX1	Q8IWV1	398 aa		5.44	□□□□□ -1.54
VPS52-221	ENST00000495755	GDPD1	Q8N9F7	314 aa		5.44	□□□□□ -1.54
VPS52-221	ENST00000495755	OR1L8	Q8NGR8	309 aa		5.44	□□□□□ -1.54
VPS52-221	ENST00000495755	MUC7	Q8TAX7	377 aa		5.44	□□□□□ -1.54
VPS52-221	ENST00000495755	VN1R17P	Q8TDU5	208 aa		5.44	□□□□□ -1.54
VPS52-221	ENST00000495755	CITED4	Q96RK1	184 aa		5.44	□□□□□ -1.54
VPS52-221	ENST00000495755	NAA50	Q9GZZ1	169 aa	Known RBP	5.44	□□□□□ -1.54
VPS52-221	ENST00000495755	FAM212B	Q9NTI7	297 aa	Predicted RBP	5.44	□□□□□ -1.54
VPS52-221	ENST00000495755	TECR	Q9NZ01	308 aa	Known RBP	5.44	□□□□□ -1.54
VPS52-221	ENST00000495755	OR51B2	Q9Y5P1	312 aa		5.44	□□□□□ -1.54
VPS52-221	ENST00000495755	DNAH1	Q9P2D7	4330 aa		5.44	□□□□□ -1.54
VPS52-221	ENST00000495755	ZNF320	A2RRD8	509 aa		5.43	□□□□□ -1.54
VPS52-221	ENST00000495755	DBX1	A6NMT0	343 aa		5.43	□□□□□ -1.54
VPS52-221	ENST00000495755		M0QYG6	137 aa		5.43	□□□□□ -1.54
VPS52-221	ENST00000495755	SNAPC5	O75971	98 aa		5.43	□□□□□ -1.54
VPS52-221	ENST00000495755	TPPP	O94811	219 aa		5.43	□□□□□ -1.54
VPS52-221	ENST00000495755	IGKV1-39	P01597	117 aa		5.43	□□□□□ -1.54
VPS52-221	ENST00000495755	IGKV1D-39	P04432	117 aa		5.43	□□□□□ -1.54
VPS52-221	ENST00000495755	CD7	P09564	240 aa		5.43	□□□□□ -1.54
VPS52-221	ENST00000495755	C8orf88	P0DMB2	117 aa		5.43	□□□□□ -1.54
VPS52-221	ENST00000495755	OR13C7	P0DN81	318 aa		5.43	□□□□□ -1.54
VPS52-221	ENST00000495755	ZNF182	P17025	639 aa	Predicted RBP	5.43	□□□□□ -1.54
VPS52-221	ENST00000495755	CD81	P60033	236 aa		5.43	□□□□□ -1.54
VPS52-221	ENST00000495755	MZT2A	Q6P582	158 aa		5.43	□□□□□ -1.54
VPS52-221	ENST00000495755	UNQ9165/PRO28630	Q6UXU0	137 aa		5.43	□□□□□ -1.54
VPS52-221	ENST00000495755	TBC1D26	Q86UD7	250 aa		5.43	□□□□□ -1.54
VPS52-221	ENST00000495755	SLC38A6	Q8IZM9	456 aa		5.43	□□□□□ -1.54
VPS52-221	ENST00000495755	DYNLRB2	Q8TF09	96 aa		5.43	□□□□□ -1.54
VPS52-221	ENST00000495755	CACNG8	Q8WXS5	425 aa		5.43	□□□□□ -1.54
VPS52-221	ENST00000495755	AP3S1	Q92572	193 aa		5.43	□□□□□ -1.54
VPS52-221	ENST00000495755	LSM10	Q969L4	123 aa	Known RBP	5.43	□□□□□ -1.54
VPS52-221	ENST00000495755	WDR89	Q96FK6	387 aa	Predicted RBP	5.43	□□□□□ -1.54
VPS52-221	ENST00000495755	NEURL2	Q9BR09	285 aa		5.43	□□□□□ -1.54
VPS52-221	ENST00000495755	SPATA25	Q9BR10	227 aa		5.43	□□□□□ -1.54
VPS52-221	ENST00000495755	TUBA4B	Q9H853	241 aa		5.43	□□□□□ -1.54
VPS52-221	ENST00000495755	EDA2R	Q9HAV5	297 aa		5.43	□□□□□ -1.54
VPS52-221	ENST00000495755	TMEM14B	Q9NUH8	114 aa		5.43	□□□□□ -1.54
VPS52-221	ENST00000495755	THYN1	Q9P016	225 aa		5.43	□□□□□ -1.54
VPS52-221	ENST00000495755	KLK11	Q9UBX7	282 aa		5.43	□□□□□ -1.54
VPS52-221	ENST00000495755	MLX	Q9UH92	298 aa		5.43	□□□□□ -1.54
VPS52-221	ENST00000495755	PRND	Q9UKY0	176 aa		5.43	□□□□□ -1.54
VPS52-221	ENST00000495755	NSG2	Q9Y328	171 aa		5.43	□□□□□ -1.54
VPS52-221	ENST00000495755	C15orf61	A6NNL5	157 aa		5.42	□□□□□ -1.54
VPS52-221	ENST00000495755	FAM25A	B3EWG3	89 aa		5.42	□□□□□ -1.54
VPS52-221	ENST00000495755	FAM25C	B3EWG5	89 aa		5.42	□□□□□ -1.54
VPS52-221	ENST00000495755	FAM25G	B3EWG6	89 aa		5.42	□□□□□ -1.54
VPS52-221	ENST00000495755	CYB5B	O43169	146 aa		5.42	□□□□□ -1.54
VPS52-221	ENST00000495755	TGOLN2	O43493	480 aa		5.42	□□□□□ -1.54
VPS52-221	ENST00000495755	S100G	P29377	79 aa		5.42	□□□□□ -1.54
VPS52-221	ENST00000495755	GPR183	P32249	361 aa		5.42	□□□□□ -1.54
VPS52-221	ENST00000495755	ALDH3B2	P48448	385 aa		5.42	□□□□□ -1.54
VPS52-221	ENST00000495755	ELL	P55199	621 aa	Predicted RBP	5.42	□□□□□ -1.54
VPS52-221	ENST00000495755	RND3	P61587	244 aa		5.42	□□□□□ -1.54
VPS52-221	ENST00000495755	GUCA2B	Q16661	112 aa		5.42	□□□□□ -1.54
VPS52-221	ENST00000495755	TM4SF20	Q53R12	229 aa		5.42	□□□□□ -1.54
VPS52-221	ENST00000495755	CASC10	Q5T4H9	136 aa		5.42	□□□□□ -1.54
VPS52-221	ENST00000495755	GPR107	Q5VW38	600 aa		5.42	□□□□□ -1.54
VPS52-221	ENST00000495755	ZNF57	Q68EA5	555 aa	Predicted RBP	5.42	□□□□□ -1.54
VPS52-221	ENST00000495755	SLC25A24	Q6NUK1	477 aa		5.42	□□□□□ -1.54
VPS52-221	ENST00000495755	PLET1	Q6UQ28	207 aa		5.42	□□□□□ -1.54
VPS52-221	ENST00000495755	LHFPL1	Q86WI0	220 aa		5.42	□□□□□ -1.54
VPS52-221	ENST00000495755	TMEM61	Q8N0U2	210 aa		5.42	□□□□□ -1.54
VPS52-221	ENST00000495755	DEFB125	Q8N687	156 aa		5.42	□□□□□ -1.54
VPS52-221	ENST00000495755	UXS1	Q8NBZ7	420 aa		5.42	□□□□□ -1.54
VPS52-221	ENST00000495755	OR5B3	Q8NH48	314 aa		5.42	□□□□□ -1.54
VPS52-221	ENST00000495755	OR52I2	Q8NH67	350 aa		5.42	□□□□□ -1.54
VPS52-221	ENST00000495755	SCARB1	Q8WTV0	552 aa		5.42	□□□□□ -1.54
VPS52-221	ENST00000495755	MARC2	Q969Z3	335 aa		5.42	□□□□□ -1.54
VPS52-221	ENST00000495755	SEC22A	Q96IW7	307 aa		5.42	□□□□□ -1.54
VPS52-221	ENST00000495755	ABHD1	Q96SE0	405 aa		5.42	□□□□□ -1.54
VPS52-221	ENST00000495755	ATP6V0B	Q99437	205 aa		5.42	□□□□□ -1.54
VPS52-221	ENST00000495755	TSC22D3	Q99576	134 aa		5.42	□□□□□ -1.54
VPS52-221	ENST00000495755	HINT2	Q9BX68	163 aa		5.42	□□□□□ -1.54
VPS52-221	ENST00000495755	ZNF436	Q9C0F3	470 aa	Predicted RBP	5.42	□□□□□ -1.54
VPS52-221	ENST00000495755	MIXL1	Q9H2W2	232 aa		5.42	□□□□□ -1.54
VPS52-221	ENST00000495755	PLEKHA3	Q9HB20	300 aa		5.42	□□□□□ -1.54
VPS52-221	ENST00000495755	SLC2A8	Q9NY64	477 aa		5.42	□□□□□ -1.54
VPS52-221	ENST00000495755	FKBP11	Q9NYL4	201 aa		5.42	□□□□□ -1.54
VPS52-221	ENST00000495755	MTFP1	Q9UDX5	166 aa		5.42	□□□□□ -1.54
VPS52-221	ENST00000495755	F11R	Q9Y624	299 aa	Known RBP	5.42	□□□□□ -1.54
VPS52-221	ENST00000495755	SELENOK	Q9Y6D0	94 aa		5.42	□□□□□ -1.54
VPS52-221	ENST00000495755	LYST	Q99698	3801 aa		5.42	□□□□□ -1.54
VPS52-221	ENST00000495755	EPPK1	P58107	5090 aa	Known RBP	5.42	□□□□□ -1.54
VPS52-221	ENST00000495755	TRAV25	A0A0B4J276	109 aa		5.41	□□□□□ -1.54
VPS52-221	ENST00000495755	RBMY1B	A6NDE4	496 aa	Known RBP	5.41	□□□□□ -1.54

Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms