RNA–Protein interactions for RNA: ENST00000495090.6

SYNE1-230, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 1 (best) BASIC

Gene SYNE1, Length 1,907 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-230ENST00000495090 MRPS17Q9Y2R5 130 aaKnown RBP7.99□□□□□ -1.13
SYNE1-230ENST00000495090 VCANP13611 3396 aa7.99□□□□□ -1.13
SYNE1-230ENST00000495090 TRAV34A0A0B4J273 112 aa7.99□□□□□ -1.13
SYNE1-230ENST00000495090 A0A1W2PRE2 83 aa7.99□□□□□ -1.13
SYNE1-230ENST00000495090 SPINT2O43291 252 aa7.99□□□□□ -1.13
SYNE1-230ENST00000495090 GDF9O60383 454 aa7.99□□□□□ -1.13
SYNE1-230ENST00000495090 SMPD2O60906 423 aa7.99□□□□□ -1.13
SYNE1-230ENST00000495090 FCGR3BO75015 233 aa7.99□□□□□ -1.13
SYNE1-230ENST00000495090 USF1P22415 310 aaPredicted RBP7.99□□□□□ -1.13
SYNE1-230ENST00000495090 CRYBB3P26998 211 aa7.99□□□□□ -1.13
SYNE1-230ENST00000495090 UBE2G1P62253 170 aa7.99□□□□□ -1.13
SYNE1-230ENST00000495090 AESQ08117 197 aa7.99□□□□□ -1.13
SYNE1-230ENST00000495090 Q0VFX4 171 aa7.99□□□□□ -1.13
SYNE1-230ENST00000495090 MRPL49Q13405 166 aaKnown RBP7.99□□□□□ -1.13
SYNE1-230ENST00000495090 ESPL1Q14674 2120 aa7.99□□□□□ -1.13
SYNE1-230ENST00000495090 FAM231DQ6ZW35 169 aa7.99□□□□□ -1.13
SYNE1-230ENST00000495090 FAM19A2Q8N3H0 131 aa7.99□□□□□ -1.13
SYNE1-230ENST00000495090 ZNF784Q8NCA9 323 aaPredicted RBP7.99□□□□□ -1.13
SYNE1-230ENST00000495090 SAP25Q8TEE9 199 aa7.99□□□□□ -1.13
SYNE1-230ENST00000495090 BCL2L2Q92843 193 aaPredicted RBP7.99□□□□□ -1.13
SYNE1-230ENST00000495090 ST20Q9HBF5 79 aa7.99□□□□□ -1.13
SYNE1-230ENST00000495090 B4GALT7Q9UBV7 327 aa7.99□□□□□ -1.13
SYNE1-230ENST00000495090 PSG11Q9UQ72 335 aa7.99□□□□□ -1.13
SYNE1-230ENST00000495090 PTPRBP23467 1997 aa7.98□□□□□ -1.13
SYNE1-230ENST00000495090 USF3Q68DE3 2245 aa7.98□□□□□ -1.13
SYNE1-230ENST00000495090 C2orf70A6NJV1 201 aa7.98□□□□□ -1.13
SYNE1-230ENST00000495090 C15orf65H3BRN8 121 aa7.98□□□□□ -1.13
SYNE1-230ENST00000495090 J3QR06 171 aa7.98□□□□□ -1.13
SYNE1-230ENST00000495090 CRXO43186 299 aaPredicted RBP7.98□□□□□ -1.13
SYNE1-230ENST00000495090 HSBP1O75506 76 aa7.98□□□□□ -1.13
SYNE1-230ENST00000495090 IGLL1P15814 213 aa7.98□□□□□ -1.13
SYNE1-230ENST00000495090 NTF3P20783 257 aa7.98□□□□□ -1.13
SYNE1-230ENST00000495090 NPY1RP25929 384 aa7.98□□□□□ -1.13
SYNE1-230ENST00000495090 GPR12P47775 334 aa7.98□□□□□ -1.13
SYNE1-230ENST00000495090 GABRA2P47869 451 aa7.98□□□□□ -1.13
SYNE1-230ENST00000495090 REG1BP48304 166 aa7.98□□□□□ -1.13
SYNE1-230ENST00000495090 TAS2R45P59539 299 aa7.98□□□□□ -1.13
SYNE1-230ENST00000495090 PSG5Q15238 335 aa7.98□□□□□ -1.13
SYNE1-230ENST00000495090 FAM53AQ6NSI3 398 aaPredicted RBP7.98□□□□□ -1.13
SYNE1-230ENST00000495090 MRPL54Q6P161 138 aaKnown RBP7.98□□□□□ -1.13
SYNE1-230ENST00000495090 VWA1Q6PCB0 445 aa7.98□□□□□ -1.13
SYNE1-230ENST00000495090 SMIM15Q7Z3B0 74 aa7.98□□□□□ -1.13
SYNE1-230ENST00000495090 PPP1R32Q7Z5V6 425 aa7.98□□□□□ -1.13
SYNE1-230ENST00000495090 MDP1Q86V88 176 aa7.98□□□□□ -1.13
SYNE1-230ENST00000495090 SPACA3Q8IXA5 215 aa7.98□□□□□ -1.13
SYNE1-230ENST00000495090 ABHD12Q8N2K0 398 aa7.98□□□□□ -1.13
SYNE1-230ENST00000495090 IFI44Q8TCB0 444 aa7.98□□□□□ -1.13
SYNE1-230ENST00000495090 Q8TCH9 128 aa7.98□□□□□ -1.13
SYNE1-230ENST00000495090 MBD6Q96DN6 1003 aa7.98□□□□□ -1.13
SYNE1-230ENST00000495090 FAM173AQ9BQD7 235 aa7.98□□□□□ -1.13
SYNE1-230ENST00000495090 JPT1Q9UK76 154 aa7.98□□□□□ -1.13
SYNE1-230ENST00000495090 RANBP2P49792 3224 aaKnown RBP7.98□□□□□ -1.13
SYNE1-230ENST00000495090 MED12LQ86YW9 2145 aa7.98□□□□□ -1.13
SYNE1-230ENST00000495090 SDK2Q58EX2 2172 aa7.98□□□□□ -1.13
SYNE1-230ENST00000495090 C15orf61A6NNL5 157 aa7.97□□□□□ -1.13
SYNE1-230ENST00000495090 SPINK4O60575 86 aa7.97□□□□□ -1.13
SYNE1-230ENST00000495090 CEBPDP49716 269 aaPredicted RBP7.97□□□□□ -1.13
SYNE1-230ENST00000495090 ZXDAP98168 799 aa7.97□□□□□ -1.13
SYNE1-230ENST00000495090 SLAQ13239 276 aa7.97□□□□□ -1.13
SYNE1-230ENST00000495090 FXYD3Q14802 87 aa7.97□□□□□ -1.13
SYNE1-230ENST00000495090 TNXAQ16473 311 aa7.97□□□□□ -1.13
SYNE1-230ENST00000495090 EBLN2Q6P2I7 272 aa7.97□□□□□ -1.13
SYNE1-230ENST00000495090 ACP7Q6ZNF0 438 aa7.97□□□□□ -1.13
SYNE1-230ENST00000495090 MIR17HGQ75NE6 70 aa7.97□□□□□ -1.13
SYNE1-230ENST00000495090 OR2V2Q96R30 315 aa7.97□□□□□ -1.13
SYNE1-230ENST00000495090 CHRDL1Q9BU40 450 aa7.97□□□□□ -1.13
SYNE1-230ENST00000495090 TMEM140Q9NV12 185 aa7.97□□□□□ -1.13
SYNE1-230ENST00000495090 FOXA2Q9Y261 457 aaPredicted RBP7.97□□□□□ -1.13
SYNE1-230ENST00000495090 CABIN1Q9Y6J0 2220 aa7.97□□□□□ -1.13
SYNE1-230ENST00000495090 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.97□□□□□ -1.13
SYNE1-230ENST00000495090 GGTLC3B5MD39 225 aa7.97□□□□□ -1.13
SYNE1-230ENST00000495090 M0R2Z0 102 aa7.97□□□□□ -1.13
SYNE1-230ENST00000495090 PROP1O75360 226 aa7.97□□□□□ -1.13
SYNE1-230ENST00000495090 SSTR5P35346 364 aa7.97□□□□□ -1.13
SYNE1-230ENST00000495090 ATP5IP56385 69 aaPredicted RBP7.97□□□□□ -1.13
SYNE1-230ENST00000495090 LINC00205P59089 165 aa7.97□□□□□ -1.13
SYNE1-230ENST00000495090 SRYQ05066 204 aa7.97□□□□□ -1.13
SYNE1-230ENST00000495090 LCN12Q6JVE5 192 aa7.97□□□□□ -1.13
SYNE1-230ENST00000495090 C1orf122Q6ZSJ8 110 aa7.97□□□□□ -1.13
SYNE1-230ENST00000495090 ATP5L2Q7Z4Y8 100 aa7.97□□□□□ -1.13
SYNE1-230ENST00000495090 FAM90A1Q86YD7 464 aa7.97□□□□□ -1.13
SYNE1-230ENST00000495090 OR13A1Q8NGR1 328 aa7.97□□□□□ -1.13
SYNE1-230ENST00000495090 ZNF503Q96F45 646 aa7.97□□□□□ -1.13
SYNE1-230ENST00000495090 TMEM14BQ9NUH8 114 aa7.97□□□□□ -1.13
SYNE1-230ENST00000495090 CNTRLQ7Z7A1 2325 aa7.96□□□□□ -1.13
SYNE1-230ENST00000495090 TMEM265A0A087WTH1 108 aa7.96□□□□□ -1.13
SYNE1-230ENST00000495090 HLA-DRB1P01911 266 aa7.96□□□□□ -1.13
SYNE1-230ENST00000495090 GRPP07492 148 aa7.96□□□□□ -1.13
SYNE1-230ENST00000495090 IGFBP2P18065 325 aa7.96□□□□□ -1.13
SYNE1-230ENST00000495090 TCL1AP56279 114 aa7.96□□□□□ -1.13
SYNE1-230ENST00000495090 CR1LQ2VPA4 569 aa7.96□□□□□ -1.13
SYNE1-230ENST00000495090 Q6ZR03 302 aa7.96□□□□□ -1.13
SYNE1-230ENST00000495090 FAM214BQ7L5A3 538 aa7.96□□□□□ -1.13
SYNE1-230ENST00000495090 ATOH7Q8N100 152 aa7.96□□□□□ -1.13
SYNE1-230ENST00000495090 SPEM1Q8N4L4 309 aa7.96□□□□□ -1.13
SYNE1-230ENST00000495090 OR4S2Q8NH73 311 aa7.96□□□□□ -1.13
SYNE1-230ENST00000495090 GRAMD2BQ96HH9 432 aa7.96□□□□□ -1.13
SYNE1-230ENST00000495090 LOXL4Q96JB6 756 aa7.96□□□□□ -1.13
SYNE1-230ENST00000495090 S1PR3Q99500 378 aa7.96□□□□□ -1.13
SYNE1-230ENST00000495090 NABP2Q9BQ15 211 aa7.96□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms