RNA–Protein interactions for RNA: ENST00000494993.1

HDDC3-203, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,220 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-203ENST00000494993 TMEM190Q8WZ59 177 aa16.45■□□□□ 0.22
HDDC3-203ENST00000494993 C5orf66Q9H5L9 145 aa16.45■□□□□ 0.22
HDDC3-203ENST00000494993 DIABLOQ9NR28 239 aa16.45■□□□□ 0.22
HDDC3-203ENST00000494993 COMMD9Q9P000 198 aa16.45■□□□□ 0.22
HDDC3-203ENST00000494993 CYB5BO43169 146 aa16.44■□□□□ 0.22
HDDC3-203ENST00000494993 CBX5P45973 191 aa16.44■□□□□ 0.22
HDDC3-203ENST00000494993 SLC38A6Q8IZM9 456 aa16.44■□□□□ 0.22
HDDC3-203ENST00000494993 SPAG8Q99932 426 aaPredicted RBP16.44■□□□□ 0.22
HDDC3-203ENST00000494993 YTHDF1Q9BYJ9 559 aaKnown RBP16.44■□□□□ 0.22
HDDC3-203ENST00000494993 LOC100506127A0A0U1RQW1 187 aa16.43■□□□□ 0.22
HDDC3-203ENST00000494993 SERPINE2P07093 398 aa16.43■□□□□ 0.22
HDDC3-203ENST00000494993 TRAPPC2P0DI81 140 aa16.43■□□□□ 0.22
HDDC3-203ENST00000494993 TRAPPC2BP0DI82 140 aa16.43■□□□□ 0.22
HDDC3-203ENST00000494993 RPA2P15927 270 aa16.43■□□□□ 0.22
HDDC3-203ENST00000494993 WT1-ASQ06250 92 aa16.43■□□□□ 0.22
HDDC3-203ENST00000494993 HSD17B13Q7Z5P4 300 aaPredicted RBP16.43■□□□□ 0.22
HDDC3-203ENST00000494993 WFDC3Q8IUB2 231 aa16.43■□□□□ 0.22
HDDC3-203ENST00000494993 LINC00476Q8WZB0 136 aa16.43■□□□□ 0.22
HDDC3-203ENST00000494993 MEIS3P1A6NDR6 274 aa16.42■□□□□ 0.22
HDDC3-203ENST00000494993 OR2T8A6NH00 312 aa16.42■□□□□ 0.22
HDDC3-203ENST00000494993 TSPAN4O14817 238 aa16.42■□□□□ 0.22
HDDC3-203ENST00000494993 OR13C7P0DN81 318 aa16.42■□□□□ 0.22
HDDC3-203ENST00000494993 GNRHRP30968 328 aa16.42■□□□□ 0.22
HDDC3-203ENST00000494993 APOC4P55056 127 aa16.42■□□□□ 0.22
HDDC3-203ENST00000494993 HERV-K104P61576 105 aa16.42■□□□□ 0.22
HDDC3-203ENST00000494993 SLC25A24Q6NUK1 477 aa16.42■□□□□ 0.22
HDDC3-203ENST00000494993 BORCS5Q969J3 196 aa16.42■□□□□ 0.22
HDDC3-203ENST00000494993 DAZ1Q9NQZ3 744 aaKnown RBP16.42■□□□□ 0.22
HDDC3-203ENST00000494993 UBQLN2Q9UHD9 624 aa16.42■□□□□ 0.22
HDDC3-203ENST00000494993 TP53TG1Q9Y2A0 90 aa16.42■□□□□ 0.22
HDDC3-203ENST00000494993 A0A0J9YWU9 116 aa16.41■□□□□ 0.22
HDDC3-203ENST00000494993 TEX50A0A1B0GTY4 177 aa16.41■□□□□ 0.22
HDDC3-203ENST00000494993 MARCH11A6NNE9 402 aa16.41■□□□□ 0.22
HDDC3-203ENST00000494993 ERVK-16P61578 105 aa16.41■□□□□ 0.22
HDDC3-203ENST00000494993 PMS2P11Q13670 270 aa16.41■□□□□ 0.22
HDDC3-203ENST00000494993 Q6ZWC4 215 aa16.41■□□□□ 0.22
HDDC3-203ENST00000494993 OR1L8Q8NGR8 309 aa16.41■□□□□ 0.22
HDDC3-203ENST00000494993 BSCL2Q96G97 398 aaPredicted RBP16.41■□□□□ 0.22
HDDC3-203ENST00000494993 Q9H521 79 aa16.41■□□□□ 0.22
HDDC3-203ENST00000494993 EHFQ9NZC4 300 aa16.41■□□□□ 0.22
HDDC3-203ENST00000494993 CXorf65A6NEN9 183 aa16.4■□□□□ 0.22
HDDC3-203ENST00000494993 TNFRSF9Q07011 255 aa16.4■□□□□ 0.22
HDDC3-203ENST00000494993 SPSB3Q6PJ21 355 aa16.4■□□□□ 0.22
HDDC3-203ENST00000494993 IFT46Q9NQC8 304 aa16.4■□□□□ 0.22
HDDC3-203ENST00000494993 NDUFA4L2Q9NRX3 87 aa16.4■□□□□ 0.22
HDDC3-203ENST00000494993 F11RQ9Y624 299 aaKnown RBP16.4■□□□□ 0.22
HDDC3-203ENST00000494993 NDUFA4O00483 81 aa16.39■□□□□ 0.21
HDDC3-203ENST00000494993 SPRY2O43597 315 aa16.39■□□□□ 0.21
HDDC3-203ENST00000494993 RLN1P04808 185 aa16.39■□□□□ 0.21
HDDC3-203ENST00000494993 F2RP25116 425 aa16.39■□□□□ 0.21
HDDC3-203ENST00000494993 BMI1P35226 326 aa16.39■□□□□ 0.21
HDDC3-203ENST00000494993 MFAP2P55001 183 aa16.39■□□□□ 0.21
HDDC3-203ENST00000494993 EWSR1Q01844 656 aaKnown RBP eCLIP16.39■□□□□ 0.21
HDDC3-203ENST00000494993 DEFB135Q30KP9 77 aa16.39■□□□□ 0.21
HDDC3-203ENST00000494993 ODF3L2Q3SX64 289 aa16.39■□□□□ 0.21
HDDC3-203ENST00000494993 LAMTOR1Q6IAA8 161 aa16.39■□□□□ 0.21
HDDC3-203ENST00000494993 LYG2Q86SG7 212 aa16.39■□□□□ 0.21
HDDC3-203ENST00000494993 LSM10Q969L4 123 aaKnown RBP16.39■□□□□ 0.21
HDDC3-203ENST00000494993 ATP6V0BQ99437 205 aa16.39■□□□□ 0.21
HDDC3-203ENST00000494993 HINT2Q9BX68 163 aa16.39■□□□□ 0.21
HDDC3-203ENST00000494993 IGHV3-21A0A0B4J1V1 117 aa16.38■□□□□ 0.21
HDDC3-203ENST00000494993 NUPR2A6NF83 97 aa16.38■□□□□ 0.21
HDDC3-203ENST00000494993 UBE2CO00762 179 aa16.38■□□□□ 0.21
HDDC3-203ENST00000494993 XRCC3O43542 346 aa16.38■□□□□ 0.21
HDDC3-203ENST00000494993 TMEM127O75204 238 aa16.38■□□□□ 0.21
HDDC3-203ENST00000494993 PGLYRP1O75594 196 aaPredicted RBP16.38■□□□□ 0.21
HDDC3-203ENST00000494993 DHRS11Q6UWP2 260 aa16.38■□□□□ 0.21
HDDC3-203ENST00000494993 SCARB1Q8WTV0 552 aa16.38■□□□□ 0.21
HDDC3-203ENST00000494993 MOB3AQ96BX8 217 aa16.38■□□□□ 0.21
HDDC3-203ENST00000494993 ZNF2Q9BSG1 426 aaPredicted RBP16.38■□□□□ 0.21
HDDC3-203ENST00000494993 CHRDL1Q9BU40 450 aa16.38■□□□□ 0.21
HDDC3-203ENST00000494993 C21orf62Q9NYP8 219 aa16.38■□□□□ 0.21
HDDC3-203ENST00000494993 KIR2DL5BA0A0G2JN68 375 aa16.37■□□□□ 0.21
HDDC3-203ENST00000494993 KIR2DL5BA0A0G2JPC4 375 aa16.37■□□□□ 0.21
HDDC3-203ENST00000494993 F8W735 103 aaPredicted RBP16.37■□□□□ 0.21
HDDC3-203ENST00000494993 ATP6V1G2O95670 118 aa16.37■□□□□ 0.21
HDDC3-203ENST00000494993 LY6G6CO95867 125 aa16.37■□□□□ 0.21
HDDC3-203ENST00000494993 RFX2P48378 723 aa16.37■□□□□ 0.21
HDDC3-203ENST00000494993 KIR2DL5AQ8N109 375 aa16.37■□□□□ 0.21
HDDC3-203ENST00000494993 CADM3Q8N126 398 aa16.37■□□□□ 0.21
HDDC3-203ENST00000494993 KIR2DL5BQ8NHK3 375 aa16.37■□□□□ 0.21
HDDC3-203ENST00000494993 FCAMRQ8WWV6 532 aa16.37■□□□□ 0.21
HDDC3-203ENST00000494993 C20orf24Q9BUV8 137 aa16.37■□□□□ 0.21
HDDC3-203ENST00000494993 ANAPC10Q9UM13 185 aa16.37■□□□□ 0.21
HDDC3-203ENST00000494993 NSG2Q9Y328 171 aa16.37■□□□□ 0.21
HDDC3-203ENST00000494993 OR51B2Q9Y5P1 312 aa16.37■□□□□ 0.21
HDDC3-203ENST00000494993 IGHV3OR16-8A0A075B7F1 116 aa16.36■□□□□ 0.21
HDDC3-203ENST00000494993 K7EIM0 57 aa16.36■□□□□ 0.21
HDDC3-203ENST00000494993 KRASP01116 189 aa16.36■□□□□ 0.21
HDDC3-203ENST00000494993 ADMP35318 185 aa16.36■□□□□ 0.21
HDDC3-203ENST00000494993 LPAR6P43657 344 aa16.36■□□□□ 0.21
HDDC3-203ENST00000494993 NEDD8Q15843 81 aa16.36■□□□□ 0.21
HDDC3-203ENST00000494993 DGCR14Q96DF8 476 aaKnown RBP16.36■□□□□ 0.21
HDDC3-203ENST00000494993 S100A16Q96FQ6 103 aaKnown RBP16.36■□□□□ 0.21
HDDC3-203ENST00000494993 OR4C46A6NHA9 309 aa16.35■□□□□ 0.21
HDDC3-203ENST00000494993 K7EMT4 169 aa16.35■□□□□ 0.21
HDDC3-203ENST00000494993 ZNF207O43670 478 aaKnown RBP16.35■□□□□ 0.21
HDDC3-203ENST00000494993 SNAPC5O75971 98 aa16.35■□□□□ 0.21
HDDC3-203ENST00000494993 PMP2P02689 132 aa16.35■□□□□ 0.21
HDDC3-203ENST00000494993 G6PCP35575 357 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms