RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 C5orf66Q9H5L9 145 aa17.33■□□□□ 0.36
COL27A1-208ENST00000494780 IGHV3-35A0A0C4DH35 117 aa17.32■□□□□ 0.36
COL27A1-208ENST00000494780 TGOLN2O43493 480 aa17.32■□□□□ 0.36
COL27A1-208ENST00000494780 S1PR2O95136 353 aa17.32■□□□□ 0.36
COL27A1-208ENST00000494780 FCER2P06734 321 aa17.32■□□□□ 0.36
COL27A1-208ENST00000494780 TMEM17Q86X19 198 aa17.32■□□□□ 0.36
COL27A1-208ENST00000494780 OR10W1Q8NGF6 305 aa17.32■□□□□ 0.36
COL27A1-208ENST00000494780 TMEM190Q8WZ59 177 aa17.32■□□□□ 0.36
COL27A1-208ENST00000494780 SPAG8Q99932 426 aaPredicted RBP17.32■□□□□ 0.36
COL27A1-208ENST00000494780 HYDINQ4G0P3 5121 aa17.32■□□□□ 0.36
COL27A1-208ENST00000494780 LOC100506127A0A0U1RQW1 187 aa17.31■□□□□ 0.36
COL27A1-208ENST00000494780 TMEM127O75204 238 aa17.31■□□□□ 0.36
COL27A1-208ENST00000494780 TRAPPC2P0DI81 140 aa17.31■□□□□ 0.36
COL27A1-208ENST00000494780 TRAPPC2BP0DI82 140 aa17.31■□□□□ 0.36
COL27A1-208ENST00000494780 WFDC3Q8IUB2 231 aa17.31■□□□□ 0.36
COL27A1-208ENST00000494780 TP53TG1Q9Y2A0 90 aa17.31■□□□□ 0.36
COL27A1-208ENST00000494780 TEX50A0A1B0GTY4 177 aa17.3■□□□□ 0.36
COL27A1-208ENST00000494780 SERPINE2P07093 398 aa17.3■□□□□ 0.36
COL27A1-208ENST00000494780 OR13C7P0DN81 318 aa17.3■□□□□ 0.36
COL27A1-208ENST00000494780 GNRHRP30968 328 aa17.3■□□□□ 0.36
COL27A1-208ENST00000494780 HERV-K104P61576 105 aa17.3■□□□□ 0.36
COL27A1-208ENST00000494780 ERVK-16P61578 105 aa17.3■□□□□ 0.36
COL27A1-208ENST00000494780 WT1-ASQ06250 92 aa17.3■□□□□ 0.36
COL27A1-208ENST00000494780 OR1L8Q8NGR8 309 aa17.3■□□□□ 0.36
COL27A1-208ENST00000494780 ATP6V0BQ99437 205 aa17.3■□□□□ 0.36
COL27A1-208ENST00000494780 PLECQ15149 4684 aaKnown RBP17.29■□□□□ 0.36
COL27A1-208ENST00000494780 TSPAN4O14817 238 aa17.29■□□□□ 0.36
COL27A1-208ENST00000494780 APOC4P55056 127 aa17.29■□□□□ 0.36
COL27A1-208ENST00000494780 SLC25A24Q6NUK1 477 aa17.29■□□□□ 0.36
COL27A1-208ENST00000494780 Q6ZWC4 215 aa17.29■□□□□ 0.36
COL27A1-208ENST00000494780 BSCL2Q96G97 398 aaPredicted RBP17.29■□□□□ 0.36
COL27A1-208ENST00000494780 IFT46Q9NQC8 304 aa17.29■□□□□ 0.36
COL27A1-208ENST00000494780 DAZ1Q9NQZ3 744 aaKnown RBP17.29■□□□□ 0.36
COL27A1-208ENST00000494780 ALMS1Q8TCU4 4167 aa17.29■□□□□ 0.36
COL27A1-208ENST00000494780 OR2T8A6NH00 312 aa17.28■□□□□ 0.36
COL27A1-208ENST00000494780 MARCH11A6NNE9 402 aa17.28■□□□□ 0.36
COL27A1-208ENST00000494780 XRCC3O43542 346 aa17.28■□□□□ 0.36
COL27A1-208ENST00000494780 RPA2P15927 270 aa17.28■□□□□ 0.36
COL27A1-208ENST00000494780 F2RP25116 425 aa17.28■□□□□ 0.36
COL27A1-208ENST00000494780 LAMTOR1Q6IAA8 161 aa17.28■□□□□ 0.36
COL27A1-208ENST00000494780 SPSB3Q6PJ21 355 aa17.28■□□□□ 0.36
COL27A1-208ENST00000494780 DHRS11Q6UWP2 260 aa17.28■□□□□ 0.36
COL27A1-208ENST00000494780 CADM3Q8N126 398 aa17.28■□□□□ 0.36
COL27A1-208ENST00000494780 LINC00476Q8WZB0 136 aa17.28■□□□□ 0.36
COL27A1-208ENST00000494780 NDUFA4L2Q9NRX3 87 aa17.28■□□□□ 0.36
COL27A1-208ENST00000494780 EHFQ9NZC4 300 aa17.28■□□□□ 0.36
COL27A1-208ENST00000494780 MEIS3P1A6NDR6 274 aa17.27■□□□□ 0.36
COL27A1-208ENST00000494780 NDUFA4O00483 81 aa17.27■□□□□ 0.36
COL27A1-208ENST00000494780 UBE2CO00762 179 aa17.27■□□□□ 0.36
COL27A1-208ENST00000494780 BMI1P35226 326 aa17.27■□□□□ 0.36
COL27A1-208ENST00000494780 TNFRSF9Q07011 255 aa17.27■□□□□ 0.36
COL27A1-208ENST00000494780 LSM10Q969L4 123 aaKnown RBP17.27■□□□□ 0.36
COL27A1-208ENST00000494780 C21orf62Q9NYP8 219 aa17.27■□□□□ 0.36
COL27A1-208ENST00000494780 UBQLN2Q9UHD9 624 aa17.27■□□□□ 0.36
COL27A1-208ENST00000494780 F11RQ9Y624 299 aaKnown RBP17.27■□□□□ 0.36
COL27A1-208ENST00000494780 A0A0J9YWU9 116 aa17.26■□□□□ 0.35
COL27A1-208ENST00000494780 SPRY2O43597 315 aa17.26■□□□□ 0.35
COL27A1-208ENST00000494780 PGLYRP1O75594 196 aaPredicted RBP17.26■□□□□ 0.35
COL27A1-208ENST00000494780 ATP6V1G2O95670 118 aa17.26■□□□□ 0.35
COL27A1-208ENST00000494780 RLN1P04808 185 aa17.26■□□□□ 0.35
COL27A1-208ENST00000494780 MOB3AQ96BX8 217 aa17.26■□□□□ 0.35
COL27A1-208ENST00000494780 S100A16Q96FQ6 103 aaKnown RBP17.26■□□□□ 0.35
COL27A1-208ENST00000494780 ZNF2Q9BSG1 426 aaPredicted RBP17.26■□□□□ 0.35
COL27A1-208ENST00000494780 KIR2DL5BA0A0G2JN68 375 aa17.25■□□□□ 0.35
COL27A1-208ENST00000494780 KIR2DL5BA0A0G2JPC4 375 aa17.25■□□□□ 0.35
COL27A1-208ENST00000494780 CXorf65A6NEN9 183 aa17.25■□□□□ 0.35
COL27A1-208ENST00000494780 NUPR2A6NF83 97 aa17.25■□□□□ 0.35
COL27A1-208ENST00000494780 LPAR6P43657 344 aa17.25■□□□□ 0.35
COL27A1-208ENST00000494780 RFX2P48378 723 aa17.25■□□□□ 0.35
COL27A1-208ENST00000494780 MFAP2P55001 183 aa17.25■□□□□ 0.35
COL27A1-208ENST00000494780 LYG2Q86SG7 212 aa17.25■□□□□ 0.35
COL27A1-208ENST00000494780 CROCCP3Q8IVE0 287 aa17.25■□□□□ 0.35
COL27A1-208ENST00000494780 KIR2DL5AQ8N109 375 aa17.25■□□□□ 0.35
COL27A1-208ENST00000494780 KIR2DL5BQ8NHK3 375 aa17.25■□□□□ 0.35
COL27A1-208ENST00000494780 SCARB1Q8WTV0 552 aa17.25■□□□□ 0.35
COL27A1-208ENST00000494780 CHRDL1Q9BU40 450 aa17.25■□□□□ 0.35
COL27A1-208ENST00000494780 HINT2Q9BX68 163 aa17.25■□□□□ 0.35
COL27A1-208ENST00000494780 ANAPC10Q9UM13 185 aa17.25■□□□□ 0.35
COL27A1-208ENST00000494780 OR4C46A6NHA9 309 aa17.24■□□□□ 0.35
COL27A1-208ENST00000494780 K7EMT4 169 aa17.24■□□□□ 0.35
COL27A1-208ENST00000494780 SNAPC5O75971 98 aa17.24■□□□□ 0.35
COL27A1-208ENST00000494780 KRASP01116 189 aa17.24■□□□□ 0.35
COL27A1-208ENST00000494780 PMS2P11Q13670 270 aa17.24■□□□□ 0.35
COL27A1-208ENST00000494780 CMTM1Q8IZ96 169 aa17.24■□□□□ 0.35
COL27A1-208ENST00000494780 FCAMRQ8WWV6 532 aa17.24■□□□□ 0.35
COL27A1-208ENST00000494780 DGCR14Q96DF8 476 aaKnown RBP17.24■□□□□ 0.35
COL27A1-208ENST00000494780 OR51B2Q9Y5P1 312 aa17.24■□□□□ 0.35
COL27A1-208ENST00000494780 IGHV3-21A0A0B4J1V1 117 aa17.23■□□□□ 0.35
COL27A1-208ENST00000494780 F8W735 103 aaPredicted RBP17.23■□□□□ 0.35
COL27A1-208ENST00000494780 ATF4P18848 351 aaPredicted RBP17.23■□□□□ 0.35
COL27A1-208ENST00000494780 ADMP35318 185 aa17.23■□□□□ 0.35
COL27A1-208ENST00000494780 TAS2R46P59540 309 aa17.23■□□□□ 0.35
COL27A1-208ENST00000494780 NEDD8Q15843 81 aa17.23■□□□□ 0.35
COL27A1-208ENST00000494780 DEFB135Q30KP9 77 aa17.23■□□□□ 0.35
COL27A1-208ENST00000494780 ODF3L2Q3SX64 289 aa17.23■□□□□ 0.35
COL27A1-208ENST00000494780 UBE2NLQ5JXB2 153 aa17.23■□□□□ 0.35
COL27A1-208ENST00000494780 STPG3Q8N7X2 389 aa17.23■□□□□ 0.35
COL27A1-208ENST00000494780 TMEM56Q96MV1 263 aa17.23■□□□□ 0.35
COL27A1-208ENST00000494780 C20orf24Q9BUV8 137 aa17.23■□□□□ 0.35
COL27A1-208ENST00000494780 FKBP11Q9NYL4 201 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms