RNA–Protein interactions for RNA: ENST00000494748.1

SDF4-207, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 3,516 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-207ENST00000494748 OSTCQ9NRP0 149 aa12.64□□□□□ -0.39
SDF4-207ENST00000494748 CDC42EP3Q9UKI2 254 aa12.64□□□□□ -0.39
SDF4-207ENST00000494748 TCF19Q9Y242 345 aa12.64□□□□□ -0.39
SDF4-207ENST00000494748 ARL2-SNX15V9GYD0 113 aa12.64□□□□□ -0.39
SDF4-207ENST00000494748 CRYBB3P26998 211 aa12.63□□□□□ -0.39
SDF4-207ENST00000494748 ZNF134P52741 427 aa12.63□□□□□ -0.39
SDF4-207ENST00000494748 PMS2CLQ68D20 193 aa12.63□□□□□ -0.39
SDF4-207ENST00000494748 OR4A16Q8NH70 328 aa12.63□□□□□ -0.39
SDF4-207ENST00000494748 DDB2Q92466 427 aa12.63□□□□□ -0.39
SDF4-207ENST00000494748 TNFSF15O95150 251 aa12.63□□□□□ -0.39
SDF4-207ENST00000494748 CA2P00918 260 aa12.63□□□□□ -0.39
SDF4-207ENST00000494748 SRIP30626 198 aa12.63□□□□□ -0.39
SDF4-207ENST00000494748 RPL39P5Q59GN2 51 aa12.63□□□□□ -0.39
SDF4-207ENST00000494748 WDR73Q6P4I2 378 aa12.63□□□□□ -0.39
SDF4-207ENST00000494748 CD177Q8N6Q3 437 aa12.63□□□□□ -0.39
SDF4-207ENST00000494748 WNT10AQ9GZT5 417 aa12.63□□□□□ -0.39
SDF4-207ENST00000494748 TOMM40O96008 361 aa12.63□□□□□ -0.39
SDF4-207ENST00000494748 IGFBP2P18065 325 aa12.63□□□□□ -0.39
SDF4-207ENST00000494748 GNG4P50150 75 aa12.63□□□□□ -0.39
SDF4-207ENST00000494748 TEPPQ6URK8 271 aa12.63□□□□□ -0.39
SDF4-207ENST00000494748 FAM19A2Q8N3H0 131 aa12.63□□□□□ -0.39
SDF4-207ENST00000494748 PLPPR2Q96GM1 343 aa12.63□□□□□ -0.39
SDF4-207ENST00000494748 TMEM140Q9NV12 185 aa12.63□□□□□ -0.39
SDF4-207ENST00000494748 B4GALT7Q9UBV7 327 aa12.63□□□□□ -0.39
SDF4-207ENST00000494748 GGTLC3B5MD39 225 aa12.62□□□□□ -0.39
SDF4-207ENST00000494748 Q6ZN92 141 aa12.62□□□□□ -0.39
SDF4-207ENST00000494748 NANOS1Q8WY41 292 aaKnown RBP12.62□□□□□ -0.39
SDF4-207ENST00000494748 HELTA6NFD8 242 aa12.62□□□□□ -0.39
SDF4-207ENST00000494748 DPRXA6NFQ7 191 aa12.62□□□□□ -0.39
SDF4-207ENST00000494748 AMY1AP04745 511 aa12.62□□□□□ -0.39
SDF4-207ENST00000494748 GPR12P47775 334 aa12.62□□□□□ -0.39
SDF4-207ENST00000494748 MORN2Q502X0 79 aa12.62□□□□□ -0.39
SDF4-207ENST00000494748 KLF14Q8TD94 323 aaPredicted RBP12.62□□□□□ -0.39
SDF4-207ENST00000494748 NEUROG1Q92886 237 aa12.62□□□□□ -0.39
SDF4-207ENST00000494748 SLC25A10Q9UBX3 287 aaPredicted RBP12.62□□□□□ -0.39
SDF4-207ENST00000494748 WDFY4Q6ZS81 3184 aa12.62□□□□□ -0.39
SDF4-207ENST00000494748 ISLRO14498 428 aa12.62□□□□□ -0.39
SDF4-207ENST00000494748 IFI27L2Q9H2X8 130 aa12.62□□□□□ -0.39
SDF4-207ENST00000494748 PRR14LQ5THK1 2151 aa12.61□□□□□ -0.39
SDF4-207ENST00000494748 ADH4P08319 380 aa12.61□□□□□ -0.39
SDF4-207ENST00000494748 TCL1AP56279 114 aa12.61□□□□□ -0.39
SDF4-207ENST00000494748 SLAQ13239 276 aa12.61□□□□□ -0.39
SDF4-207ENST00000494748 LTC4SQ16873 150 aa12.61□□□□□ -0.39
SDF4-207ENST00000494748 FAM234AQ9H0X4 552 aa12.61□□□□□ -0.39
SDF4-207ENST00000494748 PATE3B3GLJ2 98 aa12.61□□□□□ -0.39
SDF4-207ENST00000494748 TSPOP30536 169 aa12.61□□□□□ -0.39
SDF4-207ENST00000494748 LOXL3P58215 753 aa12.61□□□□□ -0.39
SDF4-207ENST00000494748 ALKBH2Q6NS38 261 aa12.61□□□□□ -0.39
SDF4-207ENST00000494748 DSPP15924 2871 aaKnown RBP12.61□□□□□ -0.39
SDF4-207ENST00000494748 IGKV1OR2-108A0A075B7D4 117 aa12.61□□□□□ -0.39
SDF4-207ENST00000494748 C15orf61A6NNL5 157 aa12.61□□□□□ -0.39
SDF4-207ENST00000494748 ASPHD1Q5U4P2 390 aa12.61□□□□□ -0.39
SDF4-207ENST00000494748 LCN12Q6JVE5 192 aa12.61□□□□□ -0.39
SDF4-207ENST00000494748 ZNF439Q8NDP4 499 aa12.61□□□□□ -0.39
SDF4-207ENST00000494748 C18orf32Q8TCD1 76 aa12.61□□□□□ -0.39
SDF4-207ENST00000494748 CLEC7AQ9BXN2 247 aa12.61□□□□□ -0.39
SDF4-207ENST00000494748 NKX6-3A6NJ46 265 aa12.6□□□□□ -0.39
SDF4-207ENST00000494748 M0R1X1 148 aa12.6□□□□□ -0.39
SDF4-207ENST00000494748 HNRNPA3P51991 378 aaKnown RBP12.6□□□□□ -0.39
SDF4-207ENST00000494748 GDF5OSQ5U4N7 250 aa12.6□□□□□ -0.39
SDF4-207ENST00000494748 OR4F17Q8NGA8 305 aa12.6□□□□□ -0.39
SDF4-207ENST00000494748 FAM122AQ96E09 287 aa12.6□□□□□ -0.39
SDF4-207ENST00000494748 TECRQ9NZ01 308 aaKnown RBP12.6□□□□□ -0.39
SDF4-207ENST00000494748 SPTBN2O15020 2390 aa12.6□□□□□ -0.39
SDF4-207ENST00000494748 LOC105371242A0A075B767 164 aa12.6□□□□□ -0.39
SDF4-207ENST00000494748 MYOD1P15172 320 aa12.6□□□□□ -0.39
SDF4-207ENST00000494748 PSG5Q15238 335 aa12.6□□□□□ -0.39
SDF4-207ENST00000494748 ATOH7Q8N100 152 aa12.6□□□□□ -0.39
SDF4-207ENST00000494748 FAM168AQ92567 244 aa12.6□□□□□ -0.39
SDF4-207ENST00000494748 OBP2BQ9NPH6 170 aa12.6□□□□□ -0.39
SDF4-207ENST00000494748 TMEM14BQ9NUH8 114 aa12.6□□□□□ -0.39
SDF4-207ENST00000494748 MRPS16Q9Y3D3 137 aaKnown RBP12.6□□□□□ -0.39
SDF4-207ENST00000494748 ACTL6BO94805 426 aa12.59□□□□□ -0.39
SDF4-207ENST00000494748 MT-CO2P00403 227 aa12.59□□□□□ -0.39
SDF4-207ENST00000494748 IGHV1-2P23083 117 aa12.59□□□□□ -0.39
SDF4-207ENST00000494748 GNG10P50151 68 aa12.59□□□□□ -0.39
SDF4-207ENST00000494748 PLGLB1Q02325 96 aa12.59□□□□□ -0.39
SDF4-207ENST00000494748 MRPL54Q6P161 138 aaKnown RBP12.59□□□□□ -0.39
SDF4-207ENST00000494748 SPRY4Q9C004 299 aa12.59□□□□□ -0.39
SDF4-207ENST00000494748 IL19Q9UHD0 177 aa12.59□□□□□ -0.39
SDF4-207ENST00000494748 TANC2Q9HCD6 1990 aa12.59□□□□□ -0.39
SDF4-207ENST00000494748 IGHV2-26A0A0B4J1V2 119 aa12.59□□□□□ -0.39
SDF4-207ENST00000494748 HLA-DQA1P01909 254 aa12.59□□□□□ -0.39
SDF4-207ENST00000494748 IGFBP4P22692 258 aa12.59□□□□□ -0.39
SDF4-207ENST00000494748 UNQ5815/PRO19632Q6UWF5 114 aa12.59□□□□□ -0.39
SDF4-207ENST00000494748 C6orf15Q6UXA7 325 aaPredicted RBP12.59□□□□□ -0.39
SDF4-207ENST00000494748 SPATA12Q7Z6I5 190 aa12.59□□□□□ -0.39
SDF4-207ENST00000494748 SLC24A4Q8NFF2 622 aa12.59□□□□□ -0.39
SDF4-207ENST00000494748 TXN2Q99757 166 aa12.59□□□□□ -0.39
SDF4-207ENST00000494748 POLEQ07864 2286 aa12.59□□□□□ -0.39
SDF4-207ENST00000494748 NCOR1O75376 2440 aa12.59□□□□□ -0.39
SDF4-207ENST00000494748 NPY1RP25929 384 aa12.59□□□□□ -0.39
SDF4-207ENST00000494748 CR1LQ2VPA4 569 aa12.59□□□□□ -0.39
SDF4-207ENST00000494748 COX19Q49B96 90 aa12.59□□□□□ -0.39
SDF4-207ENST00000494748 C19orf35Q6ZS72 473 aa12.59□□□□□ -0.39
SDF4-207ENST00000494748 MOB3BQ86TA1 216 aa12.59□□□□□ -0.39
SDF4-207ENST00000494748 TMEM105Q8N8V8 129 aa12.59□□□□□ -0.39
SDF4-207ENST00000494748 MRPL27Q9P0M9 148 aaKnown RBP12.59□□□□□ -0.39
SDF4-207ENST00000494748 TRAV34A0A0B4J273 112 aa12.58□□□□□ -0.4
SDF4-207ENST00000494748 SPINT2O43291 252 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms