RNA–Protein interactions for RNA: ENST00000494402.5

SNX13-210, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 453 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-210ENST00000494402 PRR15Q8IV56 129 aa4.71□□□□□ -1.66
SNX13-210ENST00000494402 OR52R1Q8NGF1 315 aa4.71□□□□□ -1.66
SNX13-210ENST00000494402 OR5W2Q8NH69 310 aa4.71□□□□□ -1.66
SNX13-210ENST00000494402 HIST1H2BHQ93079 126 aa4.71□□□□□ -1.66
SNX13-210ENST00000494402 TEX37Q96LM6 180 aa4.71□□□□□ -1.66
SNX13-210ENST00000494402 HIST1H2BNQ99877 126 aa4.71□□□□□ -1.66
SNX13-210ENST00000494402 HIST1H2BMQ99879 126 aa4.71□□□□□ -1.66
SNX13-210ENST00000494402 TBL1YQ9BQ87 522 aa4.71□□□□□ -1.66
SNX13-210ENST00000494402 PDCD10Q9BUL8 212 aa4.71□□□□□ -1.66
SNX13-210ENST00000494402 ZNF471Q9BX82 626 aaPredicted RBP4.71□□□□□ -1.66
SNX13-210ENST00000494402 YIPF3Q9GZM5 350 aa4.71□□□□□ -1.66
SNX13-210ENST00000494402 TUBA4BQ9H853 241 aa4.71□□□□□ -1.66
SNX13-210ENST00000494402 YLPM1P49750 1951 aaKnown RBP4.71□□□□□ -1.66
SNX13-210ENST00000494402 CHD5Q8TDI0 1954 aa4.71□□□□□ -1.66
SNX13-210ENST00000494402 IBTKQ9P2D0 1353 aaPredicted RBP4.7□□□□□ -1.66
SNX13-210ENST00000494402 A0A1B0GW64 132 aa4.7□□□□□ -1.66
SNX13-210ENST00000494402 TLCD2A6NGC4 264 aa4.7□□□□□ -1.66
SNX13-210ENST00000494402 FABP5P3A8MUU1 101 aa4.7□□□□□ -1.66
SNX13-210ENST00000494402 I3L521 148 aa4.7□□□□□ -1.66
SNX13-210ENST00000494402 TRGC2P03986 189 aa4.7□□□□□ -1.66
SNX13-210ENST00000494402 DEFB128Q7Z7B8 93 aa4.7□□□□□ -1.66
SNX13-210ENST00000494402 PDZD9Q8IXQ8 264 aa4.7□□□□□ -1.66
SNX13-210ENST00000494402 Q8N976 141 aa4.7□□□□□ -1.66
SNX13-210ENST00000494402 PRADC1Q9BSG0 188 aa4.7□□□□□ -1.66
SNX13-210ENST00000494402 C21orf62Q9NYP8 219 aa4.7□□□□□ -1.66
SNX13-210ENST00000494402 ZNF580Q9UK33 172 aa4.7□□□□□ -1.66
SNX13-210ENST00000494402 GPATCH8Q9UKJ3 1502 aaKnown RBP4.7□□□□□ -1.66
SNX13-210ENST00000494402 PIKFYVEQ9Y2I7 2098 aa4.69□□□□□ -1.66
SNX13-210ENST00000494402 TRIP11Q15643 1979 aa4.69□□□□□ -1.66
SNX13-210ENST00000494402 DOCK6Q96HP0 2047 aa4.69□□□□□ -1.66
SNX13-210ENST00000494402 IGHV3-21A0A0B4J1V1 117 aa4.69□□□□□ -1.66
SNX13-210ENST00000494402 A0A1W2PP18 115 aa4.69□□□□□ -1.66
SNX13-210ENST00000494402 GABARAPH6UMI1 98 aa4.69□□□□□ -1.66
SNX13-210ENST00000494402 BCL2L11O43521 198 aa4.69□□□□□ -1.66
SNX13-210ENST00000494402 IFNA4P05014 189 aa4.69□□□□□ -1.66
SNX13-210ENST00000494402 PTHLHP12272 177 aa4.69□□□□□ -1.66
SNX13-210ENST00000494402 NFYBP25208 207 aa4.69□□□□□ -1.66
SNX13-210ENST00000494402 FKBP2P26885 142 aaKnown RBP4.69□□□□□ -1.66
SNX13-210ENST00000494402 RPS25P62851 125 aaKnown RBP4.69□□□□□ -1.66
SNX13-210ENST00000494402 FAM104BQ5XKR9 115 aa4.69□□□□□ -1.66
SNX13-210ENST00000494402 NTM-AS1Q6ZSK4 140 aa4.69□□□□□ -1.66
SNX13-210ENST00000494402 LHFPL1Q86WI0 220 aa4.69□□□□□ -1.66
SNX13-210ENST00000494402 AMN1Q8IY45 258 aa4.69□□□□□ -1.66
SNX13-210ENST00000494402 RPS4Y2Q8TD47 263 aa4.69□□□□□ -1.66
SNX13-210ENST00000494402 ITLN2Q8WWU7 325 aaPredicted RBP4.69□□□□□ -1.66
SNX13-210ENST00000494402 NRTNQ99748 197 aa4.69□□□□□ -1.66
SNX13-210ENST00000494402 XIRP1Q702N8 1843 aaKnown RBP4.69□□□□□ -1.66
SNX13-210ENST00000494402 EIF4G3O43432 1585 aaKnown RBP4.69□□□□□ -1.66
SNX13-210ENST00000494402 CEP170Q5SW79 1584 aa4.69□□□□□ -1.66
SNX13-210ENST00000494402 UHRF1BP1LA0JNW5 1464 aa4.69□□□□□ -1.66
SNX13-210ENST00000494402 IGHV3-64DA0A0J9YX35 117 aa4.68□□□□□ -1.66
SNX13-210ENST00000494402 ARRDC5A6NEK1 342 aa4.68□□□□□ -1.66
SNX13-210ENST00000494402 LEUTXA8MZ59 168 aa4.68□□□□□ -1.66
SNX13-210ENST00000494402 TAX1BP3O14907 124 aa4.68□□□□□ -1.66
SNX13-210ENST00000494402 ZNF73O43830 326 aaPredicted RBP4.68□□□□□ -1.66
SNX13-210ENST00000494402 ZNF432O94892 652 aa4.68□□□□□ -1.66
SNX13-210ENST00000494402 PRM2P04554 102 aa4.68□□□□□ -1.66
SNX13-210ENST00000494402 P0DMU3 169 aa4.68□□□□□ -1.66
SNX13-210ENST00000494402 FAM231AP0DMU4 169 aa4.68□□□□□ -1.66
SNX13-210ENST00000494402 FAM231CP0DMU5 169 aa4.68□□□□□ -1.66
SNX13-210ENST00000494402 ZNF80P51504 273 aaPredicted RBP4.68□□□□□ -1.66
SNX13-210ENST00000494402 RPL30P62888 115 aaKnown RBP4.68□□□□□ -1.66
SNX13-210ENST00000494402 TMEM69Q5SWH9 247 aa4.68□□□□□ -1.66
SNX13-210ENST00000494402 C1orf140Q5VVS0 124 aa4.68□□□□□ -1.66
SNX13-210ENST00000494402 AMTNQ6UX39 209 aa4.68□□□□□ -1.66
SNX13-210ENST00000494402 SSX8Q7RTT4 187 aa4.68□□□□□ -1.66
SNX13-210ENST00000494402 ZNF695Q8IW36 515 aa4.68□□□□□ -1.66
SNX13-210ENST00000494402 DAND5Q8N907 189 aa4.68□□□□□ -1.66
SNX13-210ENST00000494402 OR5C1Q8NGR4 320 aa4.68□□□□□ -1.66
SNX13-210ENST00000494402 AP1S3Q96PC3 154 aa4.68□□□□□ -1.66
SNX13-210ENST00000494402 PLA2G12AQ9BZM1 189 aa4.68□□□□□ -1.66
SNX13-210ENST00000494402 OR5AC2Q9NZP5 309 aa4.68□□□□□ -1.66
SNX13-210ENST00000494402 ZNRD1Q9P1U0 126 aa4.68□□□□□ -1.66
SNX13-210ENST00000494402 TP73-AS1Q9UF72 201 aa4.68□□□□□ -1.66
SNX13-210ENST00000494402 NAT8Q9UHE5 227 aa4.68□□□□□ -1.66
SNX13-210ENST00000494402 HS3ST2Q9Y278 367 aa4.68□□□□□ -1.66
SNX13-210ENST00000494402 KLK5Q9Y337 293 aaPredicted RBP4.68□□□□□ -1.66
SNX13-210ENST00000494402 TNS3Q68CZ2 1445 aa4.68□□□□□ -1.66
SNX13-210ENST00000494402 FGD6Q6ZV73 1430 aa4.68□□□□□ -1.66
SNX13-210ENST00000494402 REREQ9P2R6 1566 aa4.68□□□□□ -1.66
SNX13-210ENST00000494402 SCN2AQ99250 2005 aa4.67□□□□□ -1.66
SNX13-210ENST00000494402 IGKV1D-43A0A0B4J1Z2 117 aa4.67□□□□□ -1.66
SNX13-210ENST00000494402 IGHV1-3A0A0C4DH29 117 aa4.67□□□□□ -1.66
SNX13-210ENST00000494402 TMEM223A0PJW6 202 aa4.67□□□□□ -1.66
SNX13-210ENST00000494402 A6NDX4 124 aa4.67□□□□□ -1.66
SNX13-210ENST00000494402 F6UZH7 168 aa4.67□□□□□ -1.66
SNX13-210ENST00000494402 TP53I11O14683 189 aa4.67□□□□□ -1.66
SNX13-210ENST00000494402 SLC22A1O15245 554 aa4.67□□□□□ -1.66
SNX13-210ENST00000494402 ZNF324O75467 553 aaPredicted RBP4.67□□□□□ -1.66
SNX13-210ENST00000494402 LYZL6O75951 148 aa4.67□□□□□ -1.66
SNX13-210ENST00000494402 NRASP01111 189 aa4.67□□□□□ -1.66
SNX13-210ENST00000494402 IGKV1-5P01602 117 aa4.67□□□□□ -1.66
SNX13-210ENST00000494402 OR5AC1P0C628 307 aa4.67□□□□□ -1.66
SNX13-210ENST00000494402 VEGFCP49767 419 aa4.67□□□□□ -1.66
SNX13-210ENST00000494402 OCIAD2Q56VL3 154 aa4.67□□□□□ -1.66
SNX13-210ENST00000494402 GLYATL3Q5SZD4 288 aa4.67□□□□□ -1.66
SNX13-210ENST00000494402 C9orf129Q5T035 196 aaKnown RBP4.67□□□□□ -1.66
SNX13-210ENST00000494402 ZC2HC1BQ5TFG8 222 aa4.67□□□□□ -1.66
SNX13-210ENST00000494402 Q8N9W7 124 aa4.67□□□□□ -1.66
SNX13-210ENST00000494402 TMEM106AQ96A25 262 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms