RNA–Protein interactions for RNA: ENST00000493923.1

HDAC6-234, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 404 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-234ENST00000493923 SLAMF6Q96DU3 332 aa6.71□□□□□ -1.34
HDAC6-234ENST00000493923 AMELYQ99218 206 aa6.71□□□□□ -1.34
HDAC6-234ENST00000493923 PARP12Q9H0J9 701 aaKnown RBP6.71□□□□□ -1.34
HDAC6-234ENST00000493923 ZNF430Q9H8G1 570 aaPredicted RBP6.71□□□□□ -1.34
HDAC6-234ENST00000493923 TUBG2Q9NRH3 451 aa6.71□□□□□ -1.34
HDAC6-234ENST00000493923 ZNF586Q9NXT0 402 aa6.71□□□□□ -1.34
HDAC6-234ENST00000493923 TAS2R4Q9NYW5 299 aa6.71□□□□□ -1.34
HDAC6-234ENST00000493923 A0A1B0GV72 72 aa6.7□□□□□ -1.34
HDAC6-234ENST00000493923 DUXBA0A1W2PPF3 345 aa6.7□□□□□ -1.34
HDAC6-234ENST00000493923 CRYM-AS1A6NIL9 109 aa6.7□□□□□ -1.34
HDAC6-234ENST00000493923 CD300LBA8K4G0 201 aa6.7□□□□□ -1.34
HDAC6-234ENST00000493923 TMEM250H0YL14 139 aa6.7□□□□□ -1.34
HDAC6-234ENST00000493923 J3QR06 171 aa6.7□□□□□ -1.34
HDAC6-234ENST00000493923 J3QW42 95 aa6.7□□□□□ -1.34
HDAC6-234ENST00000493923 M0R135 149 aa6.7□□□□□ -1.34
HDAC6-234ENST00000493923 CDS2O95674 445 aa6.7□□□□□ -1.34
HDAC6-234ENST00000493923 SCGB1D2O95969 90 aa6.7□□□□□ -1.34
HDAC6-234ENST00000493923 HLA-DQA2P01906 255 aa6.7□□□□□ -1.34
HDAC6-234ENST00000493923 TFF1P04155 84 aa6.7□□□□□ -1.34
HDAC6-234ENST00000493923 REG1AP05451 166 aa6.7□□□□□ -1.34
HDAC6-234ENST00000493923 GATA3P23771 443 aa6.7□□□□□ -1.34
HDAC6-234ENST00000493923 ATP6V0CP27449 155 aa6.7□□□□□ -1.34
HDAC6-234ENST00000493923 GABRA2P47869 451 aa6.7□□□□□ -1.34
HDAC6-234ENST00000493923 EWSR1Q01844 656 aaKnown RBP eCLIP6.7□□□□□ -1.34
HDAC6-234ENST00000493923 MPV17LQ2QL34 196 aa6.7□□□□□ -1.34
HDAC6-234ENST00000493923 SMIM21Q3B7S5 101 aa6.7□□□□□ -1.34
HDAC6-234ENST00000493923 BSXQ3C1V8 233 aa6.7□□□□□ -1.34
HDAC6-234ENST00000493923 WDR25Q64LD2 544 aaPredicted RBP6.7□□□□□ -1.34
HDAC6-234ENST00000493923 RUSC1-AS1Q66K80 236 aa6.7□□□□□ -1.34
HDAC6-234ENST00000493923 BRD3OSQ6XYD6 125 aa6.7□□□□□ -1.34
HDAC6-234ENST00000493923 C16orf82Q7Z2V1 217 aa6.7□□□□□ -1.34
HDAC6-234ENST00000493923 WDR86Q86TI4 376 aa6.7□□□□□ -1.34
HDAC6-234ENST00000493923 C11orf53Q8IXP5 236 aa6.7□□□□□ -1.34
HDAC6-234ENST00000493923 LGI3Q8N145 548 aa6.7□□□□□ -1.34
HDAC6-234ENST00000493923 C3orf56Q8N813 242 aa6.7□□□□□ -1.34
HDAC6-234ENST00000493923 PLPP7Q8NBV4 271 aa6.7□□□□□ -1.34
HDAC6-234ENST00000493923 OR6N2Q8NGY6 317 aa6.7□□□□□ -1.34
HDAC6-234ENST00000493923 OTOSQ8NHW6 89 aa6.7□□□□□ -1.34
HDAC6-234ENST00000493923 KCNG3Q8TAE7 436 aa6.7□□□□□ -1.34
HDAC6-234ENST00000493923 SDSLQ96GA7 329 aa6.7□□□□□ -1.34
HDAC6-234ENST00000493923 ZNF799Q96GE5 643 aa6.7□□□□□ -1.34
HDAC6-234ENST00000493923 PGAM5Q96HS1 289 aa6.7□□□□□ -1.34
HDAC6-234ENST00000493923 TXN2Q99757 166 aa6.7□□□□□ -1.34
HDAC6-234ENST00000493923 SSBP3Q9BWW4 388 aaPredicted RBP6.7□□□□□ -1.34
HDAC6-234ENST00000493923 CST9LQ9H4G1 147 aa6.7□□□□□ -1.34
HDAC6-234ENST00000493923 WFDC1Q9HC57 220 aa6.7□□□□□ -1.34
HDAC6-234ENST00000493923 EHFQ9NZC4 300 aa6.7□□□□□ -1.34
HDAC6-234ENST00000493923 ZNF319Q9P2F9 582 aa6.7□□□□□ -1.34
HDAC6-234ENST00000493923 IGHV3OR15-7A0A075B7D8 119 aa6.69□□□□□ -1.34
HDAC6-234ENST00000493923 TRAV40A0A0B4J280 105 aa6.69□□□□□ -1.34
HDAC6-234ENST00000493923 KIR2DS1A0A191URI9 304 aa6.69□□□□□ -1.34
HDAC6-234ENST00000493923 TMEM14DPA8MWL7 114 aa6.69□□□□□ -1.34
HDAC6-234ENST00000493923 SPRY1O43609 319 aaPredicted RBP6.69□□□□□ -1.34
HDAC6-234ENST00000493923 YPEL1O60688 119 aa6.69□□□□□ -1.34
HDAC6-234ENST00000493923 RAMP3O60896 148 aa6.69□□□□□ -1.34
HDAC6-234ENST00000493923 KBTBD11O94819 623 aa6.69□□□□□ -1.34
HDAC6-234ENST00000493923 NDUFB8O95169 186 aa6.69□□□□□ -1.34
HDAC6-234ENST00000493923 HIST1H1DP16402 221 aaKnown RBP6.69□□□□□ -1.34
HDAC6-234ENST00000493923 OMGP23515 440 aa6.69□□□□□ -1.34
HDAC6-234ENST00000493923 PRTN3P24158 256 aa6.69□□□□□ -1.34
HDAC6-234ENST00000493923 GATA4P43694 442 aa6.69□□□□□ -1.34
HDAC6-234ENST00000493923 THBS3P49746 956 aa6.69□□□□□ -1.34
HDAC6-234ENST00000493923 FGF12P61328 243 aa6.69□□□□□ -1.34
HDAC6-234ENST00000493923 PRB3Q04118 309 aaPredicted RBP6.69□□□□□ -1.34
HDAC6-234ENST00000493923 DEFB112Q30KQ8 113 aa6.69□□□□□ -1.34
HDAC6-234ENST00000493923 COX19Q49B96 90 aa6.69□□□□□ -1.34
HDAC6-234ENST00000493923 TPTE2P1Q5T6R2 138 aa6.69□□□□□ -1.34
HDAC6-234ENST00000493923 LHFPL4Q7Z7J7 247 aa6.69□□□□□ -1.34
HDAC6-234ENST00000493923 MTURNQ8N3F0 131 aa6.69□□□□□ -1.34
HDAC6-234ENST00000493923 OR2C3Q8N628 320 aa6.69□□□□□ -1.34
HDAC6-234ENST00000493923 CCDC71LQ8N9Z2 235 aa6.69□□□□□ -1.34
HDAC6-234ENST00000493923 OR5AU1Q8NGC0 362 aa6.69□□□□□ -1.34
HDAC6-234ENST00000493923 OR1L6Q8NGR2 347 aa6.69□□□□□ -1.34
HDAC6-234ENST00000493923 OR2AJ1Q8NGZ0 328 aa6.69□□□□□ -1.34
HDAC6-234ENST00000493923 Q8TCH9 128 aa6.69□□□□□ -1.34
HDAC6-234ENST00000493923 MBD3L1Q8WWY6 194 aa6.69□□□□□ -1.34
HDAC6-234ENST00000493923 NEIL1Q96FI4 390 aaPredicted RBP6.69□□□□□ -1.34
HDAC6-234ENST00000493923 YPEL2Q96QA6 119 aa6.69□□□□□ -1.34
HDAC6-234ENST00000493923 FGF23Q9GZV9 251 aaPredicted RBP6.69□□□□□ -1.34
HDAC6-234ENST00000493923 R4GMQ9 66 aa6.69□□□□□ -1.34
HDAC6-234ENST00000493923 OR5B21A6NL26 309 aa6.68□□□□□ -1.34
HDAC6-234ENST00000493923 PRR32B1ATL7 298 aa6.68□□□□□ -1.34
HDAC6-234ENST00000493923 SIRPB1O00241 398 aa6.68□□□□□ -1.34
HDAC6-234ENST00000493923 TMPRSS2O15393 492 aa6.68□□□□□ -1.34
HDAC6-234ENST00000493923 IFNA5P01569 189 aa6.68□□□□□ -1.34
HDAC6-234ENST00000493923 VSIG8P0DPA2 414 aa6.68□□□□□ -1.34
HDAC6-234ENST00000493923 MDKP21741 143 aaPredicted RBP6.68□□□□□ -1.34
HDAC6-234ENST00000493923 DLX1P56177 255 aa6.68□□□□□ -1.34
HDAC6-234ENST00000493923 TAS2R30P59541 319 aa6.68□□□□□ -1.34
HDAC6-234ENST00000493923 KRTAP10-3P60369 221 aa6.68□□□□□ -1.34
HDAC6-234ENST00000493923 GNB2P62879 340 aa6.68□□□□□ -1.34
HDAC6-234ENST00000493923 QRFPP83859 136 aa6.68□□□□□ -1.34
HDAC6-234ENST00000493923 RELBQ01201 579 aa6.68□□□□□ -1.34
HDAC6-234ENST00000493923 SCGB2A2Q13296 93 aa6.68□□□□□ -1.34
HDAC6-234ENST00000493923 ARFRP1Q13795 201 aa6.68□□□□□ -1.34
HDAC6-234ENST00000493923 VAMP3Q15836 100 aa6.68□□□□□ -1.34
HDAC6-234ENST00000493923 PMCHL1Q16048 86 aa6.68□□□□□ -1.34
HDAC6-234ENST00000493923 PCK2Q16822 640 aa6.68□□□□□ -1.34
HDAC6-234ENST00000493923 C4orf48Q5BLP8 95 aa6.68□□□□□ -1.34
HDAC6-234ENST00000493923 Q6ZN92 141 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms