RNA–Protein interactions for RNA: ENST00000493919.5

BRCA1-222, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-222ENST00000493919 SPAG8Q99932 426 aaPredicted RBP9.66□□□□□ -0.86
BRCA1-222ENST00000493919 NMNAT2Q9BZQ4 307 aa9.66□□□□□ -0.86
BRCA1-222ENST00000493919 DHDHQ9UQ10 334 aa9.66□□□□□ -0.86
BRCA1-222ENST00000493919 A0A096LPE4 126 aa9.66□□□□□ -0.86
BRCA1-222ENST00000493919 TRAV8-6A0A0B4J262 113 aa9.66□□□□□ -0.86
BRCA1-222ENST00000493919 A0A1W2PPZ6 126 aa9.66□□□□□ -0.86
BRCA1-222ENST00000493919 A0A1W2PRX2 142 aa9.66□□□□□ -0.86
BRCA1-222ENST00000493919 ARRDC5A6NEK1 342 aa9.66□□□□□ -0.86
BRCA1-222ENST00000493919 OR2J3O76001 311 aa9.66□□□□□ -0.86
BRCA1-222ENST00000493919 PPP1R3DO95685 299 aa9.66□□□□□ -0.86
BRCA1-222ENST00000493919 GASTP01350 101 aa9.66□□□□□ -0.86
BRCA1-222ENST00000493919 SPINK8P0C7L1 97 aa9.66□□□□□ -0.86
BRCA1-222ENST00000493919 HRH1P35367 487 aa9.66□□□□□ -0.86
BRCA1-222ENST00000493919 FXYD6P3P58550 94 aa9.66□□□□□ -0.86
BRCA1-222ENST00000493919 ZNF92Q03936 586 aa9.66□□□□□ -0.86
BRCA1-222ENST00000493919 EDDM3AQ14507 147 aa9.66□□□□□ -0.86
BRCA1-222ENST00000493919 NRN1LQ496H8 165 aa9.66□□□□□ -0.86
BRCA1-222ENST00000493919 C6orf226Q5I0X4 101 aa9.66□□□□□ -0.86
BRCA1-222ENST00000493919 LRP11Q86VZ4 500 aa9.66□□□□□ -0.86
BRCA1-222ENST00000493919 OR10V1Q8NGI7 309 aa9.66□□□□□ -0.86
BRCA1-222ENST00000493919 OR1L4Q8NGR5 311 aa9.66□□□□□ -0.86
BRCA1-222ENST00000493919 Q96M85 177 aa9.66□□□□□ -0.86
BRCA1-222ENST00000493919 AK3Q9UIJ7 227 aa9.66□□□□□ -0.86
BRCA1-222ENST00000493919 ANXA10Q9UJ72 324 aa9.66□□□□□ -0.86
BRCA1-222ENST00000493919 APCP25054 2843 aa9.65□□□□□ -0.86
BRCA1-222ENST00000493919 ITPR2Q14571 2701 aa9.65□□□□□ -0.86
BRCA1-222ENST00000493919 TEX48A0A1B0GUV7 120 aa9.65□□□□□ -0.86
BRCA1-222ENST00000493919 A0A1B0GX51 115 aa9.65□□□□□ -0.86
BRCA1-222ENST00000493919 J3QLI3 93 aa9.65□□□□□ -0.86
BRCA1-222ENST00000493919 IGHMP01871 453 aa9.65□□□□□ -0.86
BRCA1-222ENST00000493919 ATP1B3P54709 279 aa9.65□□□□□ -0.86
BRCA1-222ENST00000493919 GUCA2AQ02747 115 aa9.65□□□□□ -0.86
BRCA1-222ENST00000493919 FMODQ06828 376 aa9.65□□□□□ -0.86
BRCA1-222ENST00000493919 PMCHL1Q16048 86 aa9.65□□□□□ -0.86
BRCA1-222ENST00000493919 FFAR4Q5NUL3 377 aa9.65□□□□□ -0.86
BRCA1-222ENST00000493919 BVES-AS1Q5T3Y7 98 aa9.65□□□□□ -0.86
BRCA1-222ENST00000493919 LEG1Q6P5S2 330 aa9.65□□□□□ -0.86
BRCA1-222ENST00000493919 OR4A5Q8NH83 315 aa9.65□□□□□ -0.86
BRCA1-222ENST00000493919 PIGCQ92535 297 aa9.65□□□□□ -0.86
BRCA1-222ENST00000493919 TSSK6Q9BXA6 273 aa9.65□□□□□ -0.86
BRCA1-222ENST00000493919 PARLQ9H300 379 aa9.65□□□□□ -0.86
BRCA1-222ENST00000493919 FAM206AQ9NX38 181 aa9.65□□□□□ -0.86
BRCA1-222ENST00000493919 ZNF581Q9P0T4 197 aa9.65□□□□□ -0.86
BRCA1-222ENST00000493919 SLC2A10O95528 541 aa9.64□□□□□ -0.87
BRCA1-222ENST00000493919 SRIP30626 198 aa9.64□□□□□ -0.87
BRCA1-222ENST00000493919 GLRXP35754 106 aa9.64□□□□□ -0.87
BRCA1-222ENST00000493919 SRP14P37108 136 aaKnown RBP9.64□□□□□ -0.87
BRCA1-222ENST00000493919 ZNF295-AS1Q8N0V1 137 aa9.64□□□□□ -0.87
BRCA1-222ENST00000493919 OR52E2Q8NGJ4 325 aa9.64□□□□□ -0.87
BRCA1-222ENST00000493919 TMEM54Q969K7 222 aa9.64□□□□□ -0.87
BRCA1-222ENST00000493919 FOXB1Q99853 325 aa9.64□□□□□ -0.87
BRCA1-222ENST00000493919 SAMD10Q9BYL1 202 aa9.64□□□□□ -0.87
BRCA1-222ENST00000493919 PLA2G12AQ9BZM1 189 aa9.64□□□□□ -0.87
BRCA1-222ENST00000493919 ST20Q9HBF5 79 aa9.64□□□□□ -0.87
BRCA1-222ENST00000493919 IER3IP1Q9Y5U9 82 aa9.64□□□□□ -0.87
BRCA1-222ENST00000493919 PRR14LQ5THK1 2151 aa9.64□□□□□ -0.87
BRCA1-222ENST00000493919 SHISA3A0PJX4 238 aa9.64□□□□□ -0.87
BRCA1-222ENST00000493919 A8MZ25 164 aa9.64□□□□□ -0.87
BRCA1-222ENST00000493919 J3KT08 172 aa9.64□□□□□ -0.87
BRCA1-222ENST00000493919 JTBO76095 146 aa9.64□□□□□ -0.87
BRCA1-222ENST00000493919 MOSP00540 346 aa9.64□□□□□ -0.87
BRCA1-222ENST00000493919 REG1AP05451 166 aa9.64□□□□□ -0.87
BRCA1-222ENST00000493919 CRYGSP22914 178 aa9.64□□□□□ -0.87
BRCA1-222ENST00000493919 CD34P28906 385 aa9.64□□□□□ -0.87
BRCA1-222ENST00000493919 SEC11AP67812 179 aa9.64□□□□□ -0.87
BRCA1-222ENST00000493919 GPX7Q96SL4 187 aaPredicted RBP9.64□□□□□ -0.87
BRCA1-222ENST00000493919 RERGLQ9H628 205 aa9.64□□□□□ -0.87
BRCA1-222ENST00000493919 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.63□□□□□ -0.87
BRCA1-222ENST00000493919 CD300LBA8K4G0 201 aa9.63□□□□□ -0.87
BRCA1-222ENST00000493919 FOXI3A8MTJ6 420 aaPredicted RBP9.63□□□□□ -0.87
BRCA1-222ENST00000493919 DIRC3C9JPN6 131 aa9.63□□□□□ -0.87
BRCA1-222ENST00000493919 NBR2O15453 112 aa9.63□□□□□ -0.87
BRCA1-222ENST00000493919 FCN3O75636 299 aa9.63□□□□□ -0.87
BRCA1-222ENST00000493919 CT45A6P0DMU7 189 aa9.63□□□□□ -0.87
BRCA1-222ENST00000493919 CT45A5P0DMU8 189 aa9.63□□□□□ -0.87
BRCA1-222ENST00000493919 CT45A7P0DMV0 189 aa9.63□□□□□ -0.87
BRCA1-222ENST00000493919 EDN2P20800 178 aa9.63□□□□□ -0.87
BRCA1-222ENST00000493919 DLX6P56179 175 aa9.63□□□□□ -0.87
BRCA1-222ENST00000493919 PRSS12P56730 875 aa9.63□□□□□ -0.87
BRCA1-222ENST00000493919 RPS28P62857 69 aaKnown RBP9.63□□□□□ -0.87
BRCA1-222ENST00000493919 RAB40BQ12829 278 aa9.63□□□□□ -0.87
BRCA1-222ENST00000493919 MPV17LQ2QL34 196 aa9.63□□□□□ -0.87
BRCA1-222ENST00000493919 TIGITQ495A1 244 aa9.63□□□□□ -0.87
BRCA1-222ENST00000493919 RNASE12Q5GAN4 147 aaKnown RBP9.63□□□□□ -0.87
BRCA1-222ENST00000493919 CT45A1Q5HYN5 189 aa9.63□□□□□ -0.87
BRCA1-222ENST00000493919 CXorf66Q5JRM2 361 aaPredicted RBP9.63□□□□□ -0.87
BRCA1-222ENST00000493919 OR2K2Q8NGT1 345 aa9.63□□□□□ -0.87
BRCA1-222ENST00000493919 CT45A3Q8NHU0 189 aa9.63□□□□□ -0.87
BRCA1-222ENST00000493919 RTBDNQ9BSG5 229 aaPredicted RBP9.63□□□□□ -0.87
BRCA1-222ENST00000493919 IGKV1D-43A0A0B4J1Z2 117 aa9.62□□□□□ -0.87
BRCA1-222ENST00000493919 A0A0U1RRA0 63 aa9.62□□□□□ -0.87
BRCA1-222ENST00000493919 OR4C45A6NMZ5 311 aa9.62□□□□□ -0.87
BRCA1-222ENST00000493919 M0R1B8 84 aa9.62□□□□□ -0.87
BRCA1-222ENST00000493919 SEC11BP0C7V7 166 aa9.62□□□□□ -0.87
BRCA1-222ENST00000493919 DANCRP0C864 163 aa9.62□□□□□ -0.87
BRCA1-222ENST00000493919 ATXN7L3Q14CW9 347 aaPredicted RBP9.62□□□□□ -0.87
BRCA1-222ENST00000493919 ZNF260Q3ZCT1 412 aa9.62□□□□□ -0.87
BRCA1-222ENST00000493919 SLC35F2Q8IXU6 374 aa9.62□□□□□ -0.87
BRCA1-222ENST00000493919 OR8B12Q8NGG6 310 aa9.62□□□□□ -0.87
BRCA1-222ENST00000493919 ZNRF2Q8NHG8 242 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms