RNA–Protein interactions for RNA: ENST00000493903.1

GTF3A-208, Transcript of general transcription factor IIIA, humanhuman

TSL 3

Gene GTF3A, Length 748 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-208ENST00000493903 CALHM3Q86XJ0 350 aa2.68□□□□□ -1.98
GTF3A-208ENST00000493903 SGPP2Q8IWX5 399 aa2.68□□□□□ -1.98
GTF3A-208ENST00000493903 OSR2Q8N2R0 312 aa2.68□□□□□ -1.98
GTF3A-208ENST00000493903 OR5P3Q8WZ94 311 aa2.68□□□□□ -1.98
GTF3A-208ENST00000493903 RBPMSQ93062 196 aaKnown RBP2.68□□□□□ -1.98
GTF3A-208ENST00000493903 DGCR14Q96DF8 476 aaKnown RBP2.68□□□□□ -1.98
GTF3A-208ENST00000493903 CPNE2Q96FN4 548 aaPredicted RBP2.68□□□□□ -1.98
GTF3A-208ENST00000493903 OR52B2Q96RD2 323 aa2.68□□□□□ -1.98
GTF3A-208ENST00000493903 TMEM109Q9BVC6 243 aa2.68□□□□□ -1.98
GTF3A-208ENST00000493903 VCX3BQ9H321 246 aa2.68□□□□□ -1.98
GTF3A-208ENST00000493903 MMACHCQ9Y4U1 282 aa2.68□□□□□ -1.98
GTF3A-208ENST00000493903 PHLDA3Q9Y5J5 127 aa2.68□□□□□ -1.98
GTF3A-208ENST00000493903 EP300Q09472 2414 aaPredicted RBP2.68□□□□□ -1.98
GTF3A-208ENST00000493903 CHD8Q9HCK8 2581 aa2.67□□□□□ -1.98
GTF3A-208ENST00000493903 MAP1BP46821 2468 aaKnown RBP2.67□□□□□ -1.98
GTF3A-208ENST00000493903 GPR179Q6PRD1 2367 aa2.67□□□□□ -1.98
GTF3A-208ENST00000493903 DSCAML1Q8TD84 2053 aa2.67□□□□□ -1.98
GTF3A-208ENST00000493903 SPEGQ15772 3267 aa2.67□□□□□ -1.98
GTF3A-208ENST00000493903 A0A1B0GVY2 172 aa2.67□□□□□ -1.98
GTF3A-208ENST00000493903 LINC00862A6NCI5 91 aa2.67□□□□□ -1.98
GTF3A-208ENST00000493903 ZNF729A6NN14 1252 aaPredicted RBP2.67□□□□□ -1.98
GTF3A-208ENST00000493903 C16orf90A8MZG2 172 aa2.67□□□□□ -1.98
GTF3A-208ENST00000493903 EEF1E1-BLOC1S5C9J1V9 151 aa2.67□□□□□ -1.98
GTF3A-208ENST00000493903 M0R381 172 aa2.67□□□□□ -1.98
GTF3A-208ENST00000493903 EEF1E1O43324 174 aaKnown RBP2.67□□□□□ -1.98
GTF3A-208ENST00000493903 APOMO95445 188 aa2.67□□□□□ -1.98
GTF3A-208ENST00000493903 IGKV1D-33P01593 117 aa2.67□□□□□ -1.98
GTF3A-208ENST00000493903 IGKV1-33P01594 117 aa2.67□□□□□ -1.98
GTF3A-208ENST00000493903 IGHG2P01859 326 aa2.67□□□□□ -1.98
GTF3A-208ENST00000493903 TRGV3P03979 118 aa2.67□□□□□ -1.98
GTF3A-208ENST00000493903 OPN1SWP03999 348 aa2.67□□□□□ -1.98
GTF3A-208ENST00000493903 FAM228BP0C875 321 aa2.67□□□□□ -1.98
GTF3A-208ENST00000493903 MAGEA12P43365 314 aa2.67□□□□□ -1.98
GTF3A-208ENST00000493903 TMEM33P57088 247 aa2.67□□□□□ -1.98
GTF3A-208ENST00000493903 PSME3P61289 254 aa2.67□□□□□ -1.98
GTF3A-208ENST00000493903 HIST1H3AP68431 136 aa2.67□□□□□ -1.98
GTF3A-208ENST00000493903 BTN3A2P78410 334 aa2.67□□□□□ -1.98
GTF3A-208ENST00000493903 H3F3AP84243 136 aa2.67□□□□□ -1.98
GTF3A-208ENST00000493903 HOXC5Q00444 222 aa2.67□□□□□ -1.98
GTF3A-208ENST00000493903 TMEM69Q5SWH9 247 aa2.67□□□□□ -1.98
GTF3A-208ENST00000493903 FAM201AQ5SY85 155 aa2.67□□□□□ -1.98
GTF3A-208ENST00000493903 ALKAL1Q6UXT8 129 aa2.67□□□□□ -1.98
GTF3A-208ENST00000493903 Q6ZQT7 251 aa2.67□□□□□ -1.98
GTF3A-208ENST00000493903 LRP11Q86VZ4 500 aa2.67□□□□□ -1.98
GTF3A-208ENST00000493903 PXT1Q8NFP0 134 aa2.67□□□□□ -1.98
GTF3A-208ENST00000493903 BPIFB6Q8NFQ5 453 aa2.67□□□□□ -1.98
GTF3A-208ENST00000493903 PPTC7Q8NI37 304 aa2.67□□□□□ -1.98
GTF3A-208ENST00000493903 DCUN1D1Q96GG9 259 aa2.67□□□□□ -1.98
GTF3A-208ENST00000493903 TBX5Q99593 518 aa2.67□□□□□ -1.98
GTF3A-208ENST00000493903 C1QTNF6Q9BXI9 259 aa2.67□□□□□ -1.98
GTF3A-208ENST00000493903 BOLA2Q9H3K6 86 aa2.67□□□□□ -1.98
GTF3A-208ENST00000493903 DHCR7Q9UBM7 475 aaKnown RBP2.67□□□□□ -1.98
GTF3A-208ENST00000493903 ZNF230Q9UIE0 474 aaPredicted RBP2.67□□□□□ -1.98
GTF3A-208ENST00000493903 LINC00588Q9Y4M8 146 aa2.67□□□□□ -1.98
GTF3A-208ENST00000493903 ICOSQ9Y6W8 199 aa2.67□□□□□ -1.98
GTF3A-208ENST00000493903 PKD1L2Q7Z442 2459 aa2.67□□□□□ -1.98
GTF3A-208ENST00000493903 PLXNA4Q9HCM2 1894 aa2.67□□□□□ -1.98
GTF3A-208ENST00000493903 CACNA1GO43497 2377 aa2.66□□□□□ -1.98
GTF3A-208ENST00000493903 TRBV24-1A0A075B6N3 115 aa2.66□□□□□ -1.98
GTF3A-208ENST00000493903 IGKV1OR2-108A0A075B7D4 117 aa2.66□□□□□ -1.98
GTF3A-208ENST00000493903 A8MUU9 505 aa2.66□□□□□ -1.98
GTF3A-208ENST00000493903 PSMD12O00232 456 aaPredicted RBP2.66□□□□□ -1.98
GTF3A-208ENST00000493903 GSTZ1O43708 216 aaPredicted RBP2.66□□□□□ -1.98
GTF3A-208ENST00000493903 NOS1APO75052 506 aaPredicted RBP2.66□□□□□ -1.98
GTF3A-208ENST00000493903 OR2B3O76000 313 aa2.66□□□□□ -1.98
GTF3A-208ENST00000493903 WISP3O95389 354 aaPredicted RBP2.66□□□□□ -1.98
GTF3A-208ENST00000493903 SMIM10L2AP0DMW4 78 aa2.66□□□□□ -1.98
GTF3A-208ENST00000493903 SMIM10L2BP0DMW5 78 aa2.66□□□□□ -1.98
GTF3A-208ENST00000493903 ATP6V0CP27449 155 aa2.66□□□□□ -1.98
GTF3A-208ENST00000493903 MAP2K4P45985 399 aa2.66□□□□□ -1.98
GTF3A-208ENST00000493903 BSPH1Q075Z2 132 aa2.66□□□□□ -1.98
GTF3A-208ENST00000493903 C10orf91Q5T1B1 145 aa2.66□□□□□ -1.98
GTF3A-208ENST00000493903 TMEM42Q69YG0 159 aa2.66□□□□□ -1.98
GTF3A-208ENST00000493903 LYZL2Q7Z4W2 148 aa2.66□□□□□ -1.98
GTF3A-208ENST00000493903 OR6V1Q8N148 313 aa2.66□□□□□ -1.98
GTF3A-208ENST00000493903 OR11G2Q8NGC1 345 aa2.66□□□□□ -1.98
GTF3A-208ENST00000493903 OR51D1Q8NGF3 324 aa2.66□□□□□ -1.98
GTF3A-208ENST00000493903 OR2D3Q8NGH3 330 aa2.66□□□□□ -1.98
GTF3A-208ENST00000493903 LINC00477Q96M19 166 aa2.66□□□□□ -1.98
GTF3A-208ENST00000493903 TAS2R1Q9NYW7 299 aa2.66□□□□□ -1.98
GTF3A-208ENST00000493903 CHD5Q8TDI0 1954 aa2.65□□□□□ -1.98
GTF3A-208ENST00000493903 ASPMQ8IZT6 3477 aa2.65□□□□□ -1.98
GTF3A-208ENST00000493903 SPTBN2O15020 2390 aa2.65□□□□□ -1.98
GTF3A-208ENST00000493903 ZFYVE26Q68DK2 2539 aa2.65□□□□□ -1.99
GTF3A-208ENST00000493903 A0A087WUJ7 227 aa2.65□□□□□ -1.99
GTF3A-208ENST00000493903 IGHV1-69-2A0A0G2JMI3 117 aa2.65□□□□□ -1.99
GTF3A-208ENST00000493903 OR4C45A6NMZ5 311 aa2.65□□□□□ -1.99
GTF3A-208ENST00000493903 H3BMM0 161 aa2.65□□□□□ -1.99
GTF3A-208ENST00000493903 SH2D1AO60880 128 aa2.65□□□□□ -1.99
GTF3A-208ENST00000493903 CST2P09228 141 aa2.65□□□□□ -1.99
GTF3A-208ENST00000493903 ZNF32P17041 273 aa2.65□□□□□ -1.99
GTF3A-208ENST00000493903 CCL1P22362 96 aa2.65□□□□□ -1.99
GTF3A-208ENST00000493903 GZMMP51124 257 aa2.65□□□□□ -1.99
GTF3A-208ENST00000493903 DAPP51397 102 aa2.65□□□□□ -1.99
GTF3A-208ENST00000493903 EIF4EBP1Q13541 118 aaPredicted RBP2.65□□□□□ -1.99
GTF3A-208ENST00000493903 APOFQ13790 326 aa2.65□□□□□ -1.99
GTF3A-208ENST00000493903 BAP18Q8IXM2 172 aa2.65□□□□□ -1.99
GTF3A-208ENST00000493903 ZNF615Q8N8J6 731 aa2.65□□□□□ -1.99
GTF3A-208ENST00000493903 OR2T27Q8NH04 317 aa2.65□□□□□ -1.99
GTF3A-208ENST00000493903 LHFPL5Q8TAF8 219 aa2.65□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms