RNA–Protein interactions for RNA: ENST00000493682.6

COL9A1-210, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 1,117 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-210ENST00000493682 CYB5BO43169 146 aa12.87□□□□□ -0.35
COL9A1-210ENST00000493682 FGF2P09038 288 aa12.87□□□□□ -0.35
COL9A1-210ENST00000493682 ATF4P18848 351 aaPredicted RBP12.87□□□□□ -0.35
COL9A1-210ENST00000493682 PSMB9P28065 219 aa12.87□□□□□ -0.35
COL9A1-210ENST00000493682 FXYD4P59646 89 aa12.87□□□□□ -0.35
COL9A1-210ENST00000493682 ODF3L2Q3SX64 289 aa12.87□□□□□ -0.35
COL9A1-210ENST00000493682 KIR2DL5AQ8N109 375 aa12.87□□□□□ -0.35
COL9A1-210ENST00000493682 STPG3Q8N7X2 389 aa12.87□□□□□ -0.35
COL9A1-210ENST00000493682 GDPD1Q8N9F7 314 aa12.87□□□□□ -0.35
COL9A1-210ENST00000493682 DMBX1Q8NFW5 382 aa12.87□□□□□ -0.35
COL9A1-210ENST00000493682 OR51H1Q8NH63 302 aa12.87□□□□□ -0.35
COL9A1-210ENST00000493682 KIR2DL5BQ8NHK3 375 aa12.87□□□□□ -0.35
COL9A1-210ENST00000493682 RNF183Q96D59 192 aa12.87□□□□□ -0.35
COL9A1-210ENST00000493682 SLC25A38Q96DW6 304 aa12.87□□□□□ -0.35
COL9A1-210ENST00000493682 PLEKHA2Q9HB19 425 aa12.87□□□□□ -0.35
COL9A1-210ENST00000493682 DAZ1Q9NQZ3 744 aaKnown RBP12.87□□□□□ -0.35
COL9A1-210ENST00000493682 MRPS14O60783 128 aaKnown RBP12.86□□□□□ -0.35
COL9A1-210ENST00000493682 S1PR2O95136 353 aa12.86□□□□□ -0.35
COL9A1-210ENST00000493682 FCER2P06734 321 aa12.86□□□□□ -0.35
COL9A1-210ENST00000493682 SERPINE2P07093 398 aa12.86□□□□□ -0.35
COL9A1-210ENST00000493682 TRAPPC2P0DI81 140 aa12.86□□□□□ -0.35
COL9A1-210ENST00000493682 TRAPPC2BP0DI82 140 aa12.86□□□□□ -0.35
COL9A1-210ENST00000493682 OR13C7P0DN81 318 aa12.86□□□□□ -0.35
COL9A1-210ENST00000493682 SDC2P34741 201 aa12.86□□□□□ -0.35
COL9A1-210ENST00000493682 GABARAPL2P60520 117 aa12.86□□□□□ -0.35
COL9A1-210ENST00000493682 WT1-ASQ06250 92 aa12.86□□□□□ -0.35
COL9A1-210ENST00000493682 THOC7Q6I9Y2 204 aaKnown RBP12.86□□□□□ -0.35
COL9A1-210ENST00000493682 LAMTOR1Q6IAA8 161 aa12.86□□□□□ -0.35
COL9A1-210ENST00000493682 SLC25A24Q6NUK1 477 aa12.86□□□□□ -0.35
COL9A1-210ENST00000493682 ZNF818PQ6ZRF7 136 aa12.86□□□□□ -0.35
COL9A1-210ENST00000493682 OR5H6Q8NGV6 325 aa12.86□□□□□ -0.35
COL9A1-210ENST00000493682 BSCL2Q96G97 398 aaPredicted RBP12.86□□□□□ -0.35
COL9A1-210ENST00000493682 SSR3Q9UNL2 185 aa12.86□□□□□ -0.35
COL9A1-210ENST00000493682 KLK5Q9Y337 293 aaPredicted RBP12.86□□□□□ -0.35
COL9A1-210ENST00000493682 IGHV3OR16-8A0A075B7F1 116 aa12.85□□□□□ -0.35
COL9A1-210ENST00000493682 TEX50A0A1B0GTY4 177 aa12.85□□□□□ -0.35
COL9A1-210ENST00000493682 CLEC2LP0C7M8 214 aa12.85□□□□□ -0.35
COL9A1-210ENST00000493682 RPL35AP18077 110 aaKnown RBP12.85□□□□□ -0.35
COL9A1-210ENST00000493682 MFAP2P55001 183 aa12.85□□□□□ -0.35
COL9A1-210ENST00000493682 SPSB3Q6PJ21 355 aa12.85□□□□□ -0.35
COL9A1-210ENST00000493682 SPARTQ8N0X7 666 aa12.85□□□□□ -0.35
COL9A1-210ENST00000493682 CD300LFQ8TDQ1 290 aa12.85□□□□□ -0.35
COL9A1-210ENST00000493682 GIMAP1Q8WWP7 306 aa12.85□□□□□ -0.35
COL9A1-210ENST00000493682 CHRDL1Q9BU40 450 aa12.85□□□□□ -0.35
COL9A1-210ENST00000493682 ETV7Q9Y603 341 aa12.85□□□□□ -0.35
COL9A1-210ENST00000493682 IGHV3-21A0A0B4J1V1 117 aa12.84□□□□□ -0.35
COL9A1-210ENST00000493682 OR4C46A6NHA9 309 aa12.84□□□□□ -0.35
COL9A1-210ENST00000493682 NDUFA4O00483 81 aa12.84□□□□□ -0.35
COL9A1-210ENST00000493682 ZNF207O43670 478 aaKnown RBP12.84□□□□□ -0.35
COL9A1-210ENST00000493682 SCAND1P57086 179 aa12.84□□□□□ -0.35
COL9A1-210ENST00000493682 MXD1Q05195 221 aa12.84□□□□□ -0.35
COL9A1-210ENST00000493682 AADACL3Q5VUY0 350 aa12.84□□□□□ -0.35
COL9A1-210ENST00000493682 HSD17B13Q7Z5P4 300 aaPredicted RBP12.84□□□□□ -0.35
COL9A1-210ENST00000493682 TMEM17Q86X19 198 aa12.84□□□□□ -0.35
COL9A1-210ENST00000493682 RPP25LQ8N5L8 163 aaKnown RBP12.84□□□□□ -0.35
COL9A1-210ENST00000493682 TMEM217Q8N7C4 229 aa12.84□□□□□ -0.35
COL9A1-210ENST00000493682 OR5AP2Q8NGF4 316 aa12.84□□□□□ -0.35
COL9A1-210ENST00000493682 OR1L8Q8NGR8 309 aa12.84□□□□□ -0.35
COL9A1-210ENST00000493682 C20orf24Q9BUV8 137 aa12.84□□□□□ -0.35
COL9A1-210ENST00000493682 KRTAP17-1Q9BYP8 105 aa12.84□□□□□ -0.35
COL9A1-210ENST00000493682 AUNIPQ9H7T9 357 aa12.84□□□□□ -0.35
COL9A1-210ENST00000493682 MAP6D1Q9H9H5 199 aa12.84□□□□□ -0.35
COL9A1-210ENST00000493682 C21orf62Q9NYP8 219 aa12.84□□□□□ -0.35
COL9A1-210ENST00000493682 COMMD9Q9P000 198 aa12.84□□□□□ -0.35
COL9A1-210ENST00000493682 F11RQ9Y624 299 aaKnown RBP12.84□□□□□ -0.35
COL9A1-210ENST00000493682 FRAS1Q86XX4 4008 aa12.84□□□□□ -0.35
COL9A1-210ENST00000493682 A0A0A6YYH2 397 aa12.83□□□□□ -0.36
COL9A1-210ENST00000493682 A6NJ64 397 aa12.83□□□□□ -0.36
COL9A1-210ENST00000493682 F8W735 103 aaPredicted RBP12.83□□□□□ -0.36
COL9A1-210ENST00000493682 K7EMT4 169 aa12.83□□□□□ -0.36
COL9A1-210ENST00000493682 CTSDP07339 412 aaPredicted RBP12.83□□□□□ -0.36
COL9A1-210ENST00000493682 GNRHRP30968 328 aa12.83□□□□□ -0.36
COL9A1-210ENST00000493682 ADMP35318 185 aa12.83□□□□□ -0.36
COL9A1-210ENST00000493682 OR5B3Q8NH48 314 aa12.83□□□□□ -0.36
COL9A1-210ENST00000493682 SCARB1Q8WTV0 552 aa12.83□□□□□ -0.36
COL9A1-210ENST00000493682 FCGR1BQ92637 280 aa12.83□□□□□ -0.36
COL9A1-210ENST00000493682 GALNT14Q96FL9 552 aa12.83□□□□□ -0.36
COL9A1-210ENST00000493682 ATP6V0BQ99437 205 aa12.83□□□□□ -0.36
COL9A1-210ENST00000493682 NDUFA4L2Q9NRX3 87 aa12.83□□□□□ -0.36
COL9A1-210ENST00000493682 MARCH11A6NNE9 402 aa12.82□□□□□ -0.36
COL9A1-210ENST00000493682 FCGR2BP31994 310 aaPredicted RBP12.82□□□□□ -0.36
COL9A1-210ENST00000493682 HERV-K104P61576 105 aa12.82□□□□□ -0.36
COL9A1-210ENST00000493682 ERVK-16P61578 105 aa12.82□□□□□ -0.36
COL9A1-210ENST00000493682 IDNKQ5T6J7 187 aa12.82□□□□□ -0.36
COL9A1-210ENST00000493682 PHLDA1Q8WV24 401 aaPredicted RBP12.82□□□□□ -0.36
COL9A1-210ENST00000493682 LSM10Q969L4 123 aaKnown RBP12.82□□□□□ -0.36
COL9A1-210ENST00000493682 HINT2Q9BX68 163 aa12.82□□□□□ -0.36
COL9A1-210ENST00000493682 RNF167Q9H6Y7 350 aa12.82□□□□□ -0.36
COL9A1-210ENST00000493682 RAB26Q9ULW5 256 aa12.82□□□□□ -0.36
COL9A1-210ENST00000493682 KMT2AQ03164 3969 aa12.81□□□□□ -0.36
COL9A1-210ENST00000493682 C15orf62A8K5M9 175 aa12.81□□□□□ -0.36
COL9A1-210ENST00000493682 K7EIM0 57 aa12.81□□□□□ -0.36
COL9A1-210ENST00000493682 CBX5P45973 191 aa12.81□□□□□ -0.36
COL9A1-210ENST00000493682 APRG1Q8IVJ8 170 aa12.81□□□□□ -0.36
COL9A1-210ENST00000493682 UBAC2Q8NBM4 344 aa12.81□□□□□ -0.36
COL9A1-210ENST00000493682 DIABLOQ9NR28 239 aa12.81□□□□□ -0.36
COL9A1-210ENST00000493682 SMPXQ9UHP9 88 aa12.81□□□□□ -0.36
COL9A1-210ENST00000493682 NSG2Q9Y328 171 aa12.81□□□□□ -0.36
COL9A1-210ENST00000493682 OR51B2Q9Y5P1 312 aa12.81□□□□□ -0.36
COL9A1-210ENST00000493682 MEIS3P1A6NDR6 274 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms