RNA–Protein interactions for RNA: ENST00000492909.1

PDZRN3-210, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best)

Gene PDZRN3, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-210ENST00000492909 AVPP01185 164 aa11.32□□□□□ -0.6
PDZRN3-210ENST00000492909 SAA1P0DJI8 122 aaPredicted RBP11.32□□□□□ -0.6
PDZRN3-210ENST00000492909 PAX6P26367 422 aa11.32□□□□□ -0.6
PDZRN3-210ENST00000492909 CAMLGP49069 296 aa11.32□□□□□ -0.6
PDZRN3-210ENST00000492909 POLR2GP62487 172 aaKnown RBP eCLIP11.32□□□□□ -0.6
PDZRN3-210ENST00000492909 PEA15Q15121 130 aa11.32□□□□□ -0.6
PDZRN3-210ENST00000492909 RUSC1-AS1Q66K80 236 aa11.32□□□□□ -0.6
PDZRN3-210ENST00000492909 OR2C3Q8N628 320 aa11.32□□□□□ -0.6
PDZRN3-210ENST00000492909 VSTM2AQ8TAG5 236 aa11.32□□□□□ -0.6
PDZRN3-210ENST00000492909 AJUBAQ96IF1 538 aa11.32□□□□□ -0.6
PDZRN3-210ENST00000492909 SCRT1Q9BWW7 348 aa11.32□□□□□ -0.6
PDZRN3-210ENST00000492909 MAGT1Q9H0U3 335 aa11.32□□□□□ -0.6
PDZRN3-210ENST00000492909 BET1LQ9NYM9 111 aa11.32□□□□□ -0.6
PDZRN3-210ENST00000492909 HIVEP1P15822 2718 aa11.32□□□□□ -0.6
PDZRN3-210ENST00000492909 ZANQ9Y493 2812 aa11.32□□□□□ -0.6
PDZRN3-210ENST00000492909 IGHV4-38-2P0DP08 117 aa11.31□□□□□ -0.6
PDZRN3-210ENST00000492909 RELBQ01201 579 aa11.31□□□□□ -0.6
PDZRN3-210ENST00000492909 RNF5Q99942 180 aa11.31□□□□□ -0.6
PDZRN3-210ENST00000492909 MLXQ9UH92 298 aa11.31□□□□□ -0.6
PDZRN3-210ENST00000492909 TET2Q6N021 2002 aaPredicted RBP11.31□□□□□ -0.6
PDZRN3-210ENST00000492909 ACANP16112 2415 aa11.31□□□□□ -0.6
PDZRN3-210ENST00000492909 TRAV3A0A0B4J244 114 aa11.31□□□□□ -0.6
PDZRN3-210ENST00000492909 FAM24AA6NFZ4 105 aa11.31□□□□□ -0.6
PDZRN3-210ENST00000492909 SSSCA1O60232 199 aa11.31□□□□□ -0.6
PDZRN3-210ENST00000492909 IGKV1D-33P01593 117 aa11.31□□□□□ -0.6
PDZRN3-210ENST00000492909 IGKV1-33P01594 117 aa11.31□□□□□ -0.6
PDZRN3-210ENST00000492909 IGLV2-23P01705 113 aa11.31□□□□□ -0.6
PDZRN3-210ENST00000492909 IL6RP08887 468 aaPredicted RBP11.31□□□□□ -0.6
PDZRN3-210ENST00000492909 OR2B8PP59922 312 aa11.31□□□□□ -0.6
PDZRN3-210ENST00000492909 TNFRSF9Q07011 255 aa11.31□□□□□ -0.6
PDZRN3-210ENST00000492909 GUK1Q16774 197 aa11.31□□□□□ -0.6
PDZRN3-210ENST00000492909 VMA21Q3ZAQ7 101 aa11.31□□□□□ -0.6
PDZRN3-210ENST00000492909 AARDQ4LEZ3 155 aa11.31□□□□□ -0.6
PDZRN3-210ENST00000492909 BRD3OSQ6XYD6 125 aa11.31□□□□□ -0.6
PDZRN3-210ENST00000492909 RITA1Q96K30 269 aa11.31□□□□□ -0.6
PDZRN3-210ENST00000492909 SMR3AQ99954 134 aa11.31□□□□□ -0.6
PDZRN3-210ENST00000492909 TMUB1Q9BVT8 246 aa11.31□□□□□ -0.6
PDZRN3-210ENST00000492909 SLC25A31Q9H0C2 315 aa11.31□□□□□ -0.6
PDZRN3-210ENST00000492909 SH3BGRL3Q9H299 93 aa11.31□□□□□ -0.6
PDZRN3-210ENST00000492909 HSPB7Q9UBY9 170 aa11.31□□□□□ -0.6
PDZRN3-210ENST00000492909 TNCP24821 2201 aa11.3□□□□□ -0.6
PDZRN3-210ENST00000492909 IGSF23A1L1A6 192 aa11.3□□□□□ -0.6
PDZRN3-210ENST00000492909 C15orf61A6NNL5 157 aa11.3□□□□□ -0.6
PDZRN3-210ENST00000492909 UPK2O00526 184 aa11.3□□□□□ -0.6
PDZRN3-210ENST00000492909 SYNGR2O43760 224 aa11.3□□□□□ -0.6
PDZRN3-210ENST00000492909 KBTBD11O94819 623 aa11.3□□□□□ -0.6
PDZRN3-210ENST00000492909 MOSP00540 346 aa11.3□□□□□ -0.6
PDZRN3-210ENST00000492909 CD99P14209 185 aa11.3□□□□□ -0.6
PDZRN3-210ENST00000492909 BRS3P32247 399 aa11.3□□□□□ -0.6
PDZRN3-210ENST00000492909 UBE2KP61086 200 aa11.3□□□□□ -0.6
PDZRN3-210ENST00000492909 ZNF616Q08AN1 781 aa11.3□□□□□ -0.6
PDZRN3-210ENST00000492909 KLF17Q5JT82 389 aaPredicted RBP11.3□□□□□ -0.6
PDZRN3-210ENST00000492909 ZNF429Q86V71 674 aa11.3□□□□□ -0.6
PDZRN3-210ENST00000492909 OR4A5Q8NH83 315 aa11.3□□□□□ -0.6
PDZRN3-210ENST00000492909 QTRT1Q9BXR0 403 aaKnown RBP11.3□□□□□ -0.6
PDZRN3-210ENST00000492909 LYRM2Q9NU23 88 aaPredicted RBP11.3□□□□□ -0.6
PDZRN3-210ENST00000492909 SLC25A17O43808 307 aa11.29□□□□□ -0.6
PDZRN3-210ENST00000492909 CHST1O43916 411 aa11.29□□□□□ -0.6
PDZRN3-210ENST00000492909 PRH1P02810 166 aa11.29□□□□□ -0.6
PDZRN3-210ENST00000492909 SNRNP70P08621 437 aaKnown RBP11.29□□□□□ -0.6
PDZRN3-210ENST00000492909 VAMP2P63027 116 aa11.29□□□□□ -0.6
PDZRN3-210ENST00000492909 HES1Q14469 280 aa11.29□□□□□ -0.6
PDZRN3-210ENST00000492909 ZNF266Q14584 549 aa11.29□□□□□ -0.6
PDZRN3-210ENST00000492909 HSD17B11Q8NBQ5 300 aa11.29□□□□□ -0.6
PDZRN3-210ENST00000492909 OR2T10Q8NGZ9 312 aa11.29□□□□□ -0.6
PDZRN3-210ENST00000492909 SAV1Q9H4B6 383 aaPredicted RBP11.29□□□□□ -0.6
PDZRN3-210ENST00000492909 SMCO4Q9NRQ5 59 aa11.29□□□□□ -0.6
PDZRN3-210ENST00000492909 TMEM14BQ9NUH8 114 aa11.29□□□□□ -0.6
PDZRN3-210ENST00000492909 PRNDQ9UKY0 176 aa11.29□□□□□ -0.6
PDZRN3-210ENST00000492909 FOXA2Q9Y261 457 aaPredicted RBP11.29□□□□□ -0.6
PDZRN3-210ENST00000492909 CSPG4Q6UVK1 2322 aa11.29□□□□□ -0.6
PDZRN3-210ENST00000492909 A0A1B0GW64 132 aa11.28□□□□□ -0.6
PDZRN3-210ENST00000492909 IFNA17P01571 189 aa11.28□□□□□ -0.6
PDZRN3-210ENST00000492909 CD24P25063 80 aa11.28□□□□□ -0.6
PDZRN3-210ENST00000492909 PPT1P50897 306 aa11.28□□□□□ -0.6
PDZRN3-210ENST00000492909 BPIFB3P59826 476 aa11.28□□□□□ -0.6
PDZRN3-210ENST00000492909 TMEM182Q6ZP80 229 aaPredicted RBP11.28□□□□□ -0.6
PDZRN3-210ENST00000492909 TMEM252Q8N6L7 170 aa11.28□□□□□ -0.6
PDZRN3-210ENST00000492909 TEX45Q8NA69 505 aa11.28□□□□□ -0.6
PDZRN3-210ENST00000492909 LFNGQ8NES3 379 aa11.28□□□□□ -0.6
PDZRN3-210ENST00000492909 OR52E5Q8NH55 327 aa11.28□□□□□ -0.6
PDZRN3-210ENST00000492909 TMEM167AQ8TBQ9 72 aa11.28□□□□□ -0.6
PDZRN3-210ENST00000492909 RXFP4Q8TDU9 374 aa11.28□□□□□ -0.6
PDZRN3-210ENST00000492909 EAF1Q96JC9 268 aaPredicted RBP11.28□□□□□ -0.6
PDZRN3-210ENST00000492909 RAB40CQ96S21 281 aa11.28□□□□□ -0.6
PDZRN3-210ENST00000492909 RBKSQ9H477 322 aa11.28□□□□□ -0.6
PDZRN3-210ENST00000492909 FKBP11Q9NYL4 201 aa11.28□□□□□ -0.6
PDZRN3-210ENST00000492909 A0A0U1RQK1 487 aa11.28□□□□□ -0.6
PDZRN3-210ENST00000492909 COLCA2A8K830 154 aa11.28□□□□□ -0.6
PDZRN3-210ENST00000492909 CNTFRP26992 372 aa11.28□□□□□ -0.6
PDZRN3-210ENST00000492909 FHITP49789 147 aa11.28□□□□□ -0.6
PDZRN3-210ENST00000492909 SPCS3P61009 180 aa11.28□□□□□ -0.6
PDZRN3-210ENST00000492909 RPL8P62917 257 aaKnown RBP11.28□□□□□ -0.6
PDZRN3-210ENST00000492909 EBI3Q14213 229 aa11.28□□□□□ -0.6
PDZRN3-210ENST00000492909 HNF4GQ14541 408 aa11.28□□□□□ -0.6
PDZRN3-210ENST00000492909 PSG5Q15238 335 aa11.28□□□□□ -0.6
PDZRN3-210ENST00000492909 MMDQ15546 238 aa11.28□□□□□ -0.6
PDZRN3-210ENST00000492909 LINC00518Q8N0U6 118 aa11.28□□□□□ -0.6
PDZRN3-210ENST00000492909 PBDC1Q9BVG4 233 aa11.28□□□□□ -0.6
PDZRN3-210ENST00000492909 F8P00451 2351 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms