RNA–Protein interactions for RNA: ENST00000492859.5

BRCA1-220, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-220ENST00000492859 SLC25A26Q70HW3 274 aa3.32□□□□□ -1.88
BRCA1-220ENST00000492859 SGMS2Q8NHU3 365 aa3.32□□□□□ -1.88
BRCA1-220ENST00000492859 NEURL3Q96EH8 262 aa3.32□□□□□ -1.88
BRCA1-220ENST00000492859 ZNF799Q96GE5 643 aa3.32□□□□□ -1.88
BRCA1-220ENST00000492859 RITA1Q96K30 269 aa3.32□□□□□ -1.88
BRCA1-220ENST00000492859 C18orf12Q96KH6 178 aa3.32□□□□□ -1.88
BRCA1-220ENST00000492859 PAXXQ9BUH6 204 aa3.32□□□□□ -1.88
BRCA1-220ENST00000492859 SPANXDQ9BXN6 97 aa3.32□□□□□ -1.88
BRCA1-220ENST00000492859 DUSP21Q9H596 190 aa3.32□□□□□ -1.88
BRCA1-220ENST00000492859 CALYQ9NYX4 217 aa3.32□□□□□ -1.88
BRCA1-220ENST00000492859 CACNG5Q9UF02 275 aa3.32□□□□□ -1.88
BRCA1-220ENST00000492859 VSIG4Q9Y279 399 aa3.32□□□□□ -1.88
BRCA1-220ENST00000492859 COQ4Q9Y3A0 265 aa3.32□□□□□ -1.88
BRCA1-220ENST00000492859 OR2W1Q9Y3N9 320 aa3.32□□□□□ -1.88
BRCA1-220ENST00000492859 KCNE3Q9Y6H6 103 aa3.32□□□□□ -1.88
BRCA1-220ENST00000492859 ATG2BQ96BY7 2078 aa3.32□□□□□ -1.88
BRCA1-220ENST00000492859 MYLKQ15746 1914 aa3.31□□□□□ -1.88
BRCA1-220ENST00000492859 TRAV27A0A087WT01 109 aa3.31□□□□□ -1.88
BRCA1-220ENST00000492859 hDV102S1A0JD36 115 aa3.31□□□□□ -1.88
BRCA1-220ENST00000492859 ARRDC5A6NEK1 342 aa3.31□□□□□ -1.88
BRCA1-220ENST00000492859 TMEM262E9PQX1 116 aa3.31□□□□□ -1.88
BRCA1-220ENST00000492859 GEMIN2O14893 280 aaKnown RBP3.31□□□□□ -1.88
BRCA1-220ENST00000492859 FOXS1O43638 330 aa3.31□□□□□ -1.88
BRCA1-220ENST00000492859 SCRG1O75711 98 aa3.31□□□□□ -1.88
BRCA1-220ENST00000492859 UBL3O95164 117 aa3.31□□□□□ -1.88
BRCA1-220ENST00000492859 SFT2D2O95562 160 aa3.31□□□□□ -1.88
BRCA1-220ENST00000492859 MT-ND6P03923 174 aa3.31□□□□□ -1.88
BRCA1-220ENST00000492859 CD55P08174 381 aa3.31□□□□□ -1.88
BRCA1-220ENST00000492859 SEC11BP0C7V7 166 aa3.31□□□□□ -1.88
BRCA1-220ENST00000492859 LINC00032P0C843 101 aa3.31□□□□□ -1.88
BRCA1-220ENST00000492859 CTSEP14091 401 aa3.31□□□□□ -1.88
BRCA1-220ENST00000492859 CD70P32970 193 aa3.31□□□□□ -1.88
BRCA1-220ENST00000492859 RRN3P1Q2M238 152 aa3.31□□□□□ -1.88
BRCA1-220ENST00000492859 KLF17Q5JT82 389 aaPredicted RBP3.31□□□□□ -1.88
BRCA1-220ENST00000492859 CLEC19AQ6UXS0 136 aa3.31□□□□□ -1.88
BRCA1-220ENST00000492859 SHISA6Q6ZSJ9 500 aa3.31□□□□□ -1.88
BRCA1-220ENST00000492859 TRAPPC6BQ86SZ2 158 aa3.31□□□□□ -1.88
BRCA1-220ENST00000492859 ZNF843Q8N446 348 aa3.31□□□□□ -1.88
BRCA1-220ENST00000492859 C11orf72Q8NBR9 251 aa3.31□□□□□ -1.88
BRCA1-220ENST00000492859 OR5D16Q8NGK9 328 aa3.31□□□□□ -1.88
BRCA1-220ENST00000492859 OTOSQ8NHW6 89 aa3.31□□□□□ -1.88
BRCA1-220ENST00000492859 RFESDQ8TAC1 157 aa3.31□□□□□ -1.88
BRCA1-220ENST00000492859 LRRC29Q8WV35 223 aa3.31□□□□□ -1.88
BRCA1-220ENST00000492859 TWIST2Q8WVJ9 160 aa3.31□□□□□ -1.88
BRCA1-220ENST00000492859 FAM168AQ92567 244 aa3.31□□□□□ -1.88
BRCA1-220ENST00000492859 RNF185Q96GF1 192 aa3.31□□□□□ -1.88
BRCA1-220ENST00000492859 PEBP4Q96S96 227 aa3.31□□□□□ -1.88
BRCA1-220ENST00000492859 TM2D3Q9BRN9 247 aa3.31□□□□□ -1.88
BRCA1-220ENST00000492859 TMEM106BQ9NUM4 274 aa3.31□□□□□ -1.88
BRCA1-220ENST00000492859 C21orf62Q9NYP8 219 aa3.31□□□□□ -1.88
BRCA1-220ENST00000492859 USP6P35125 1406 aa3.31□□□□□ -1.88
BRCA1-220ENST00000492859 IQSEC2Q5JU85 1478 aa3.31□□□□□ -1.88
BRCA1-220ENST00000492859 CDK13Q14004 1512 aaKnown RBP3.31□□□□□ -1.88
BRCA1-220ENST00000492859 ABCC2Q92887 1545 aa3.31□□□□□ -1.88
BRCA1-220ENST00000492859 SYCP2Q9BX26 1530 aa3.31□□□□□ -1.88
BRCA1-220ENST00000492859 SCN11AQ9UI33 1791 aa3.31□□□□□ -1.88
BRCA1-220ENST00000492859 KIAA1671Q9BY89 1806 aa3.31□□□□□ -1.88
BRCA1-220ENST00000492859 ANKRD31Q8N7Z5 1873 aa3.31□□□□□ -1.88
BRCA1-220ENST00000492859 MIA3Q5JRA6 1907 aa3.31□□□□□ -1.88
BRCA1-220ENST00000492859 MUC21A0A0G2JKD1 596 aa3.3□□□□□ -1.88
BRCA1-220ENST00000492859 ZNF503-AS2A6NEH8 195 aa3.3□□□□□ -1.88
BRCA1-220ENST00000492859 ZNF727A8MUV8 499 aa3.3□□□□□ -1.88
BRCA1-220ENST00000492859 EPM2AB3EWF7 344 aa3.3□□□□□ -1.88
BRCA1-220ENST00000492859 SOCS1O15524 211 aa3.3□□□□□ -1.88
BRCA1-220ENST00000492859 ZNHIT1O43257 154 aa3.3□□□□□ -1.88
BRCA1-220ENST00000492859 CDK2AP2O75956 126 aa3.3□□□□□ -1.88
BRCA1-220ENST00000492859 ABCA8O94911 1581 aa3.3□□□□□ -1.88
BRCA1-220ENST00000492859 APOMO95445 188 aa3.3□□□□□ -1.88
BRCA1-220ENST00000492859 NAPSAO96009 420 aa3.3□□□□□ -1.88
BRCA1-220ENST00000492859 IGHG1P01857 330 aa3.3□□□□□ -1.88
BRCA1-220ENST00000492859 TRGC2P03986 189 aa3.3□□□□□ -1.88
BRCA1-220ENST00000492859 CECR9P0C854 216 aa3.3□□□□□ -1.88
BRCA1-220ENST00000492859 GATA2P23769 480 aaPredicted RBP3.3□□□□□ -1.88
BRCA1-220ENST00000492859 GADD45AP24522 165 aa3.3□□□□□ -1.88
BRCA1-220ENST00000492859 VDAC2P45880 294 aaPredicted RBP3.3□□□□□ -1.88
BRCA1-220ENST00000492859 RPS10P46783 165 aaKnown RBP3.3□□□□□ -1.88
BRCA1-220ENST00000492859 HINT1P49773 126 aaPredicted RBP3.3□□□□□ -1.88
BRCA1-220ENST00000492859 CSRP3P50461 194 aa3.3□□□□□ -1.88
BRCA1-220ENST00000492859 BLMP54132 1417 aaPredicted RBP3.3□□□□□ -1.88
BRCA1-220ENST00000492859 BRWD1-AS2P59051 145 aa3.3□□□□□ -1.88
BRCA1-220ENST00000492859 SEC61A1P61619 476 aaKnown RBP3.3□□□□□ -1.88
BRCA1-220ENST00000492859 ATP5G2Q06055 141 aa3.3□□□□□ -1.88
BRCA1-220ENST00000492859 SPHKAPQ2M3C7 1700 aa3.3□□□□□ -1.88
BRCA1-220ENST00000492859 C9orf153Q5TBE3 101 aa3.3□□□□□ -1.88
BRCA1-220ENST00000492859 TMEM236Q5W0B7 351 aa3.3□□□□□ -1.88
BRCA1-220ENST00000492859 AAED1Q7RTV5 226 aa3.3□□□□□ -1.88
BRCA1-220ENST00000492859 FAM19A3Q7Z5A8 133 aa3.3□□□□□ -1.88
BRCA1-220ENST00000492859 RAI1Q7Z5J4 1906 aaPredicted RBP3.3□□□□□ -1.88
BRCA1-220ENST00000492859 WDR86Q86TI4 376 aa3.3□□□□□ -1.88
BRCA1-220ENST00000492859 C10orf126Q8N4M7 172 aa3.3□□□□□ -1.88
BRCA1-220ENST00000492859 RFLNBQ8N5W9 214 aa3.3□□□□□ -1.88
BRCA1-220ENST00000492859 LINC00311Q8N616 119 aa3.3□□□□□ -1.88
BRCA1-220ENST00000492859 LINC00337Q8N6G1 96 aa3.3□□□□□ -1.88
BRCA1-220ENST00000492859 ZNF114Q8NC26 417 aa3.3□□□□□ -1.88
BRCA1-220ENST00000492859 OR10J6PQ8NGY7 276 aa3.3□□□□□ -1.88
BRCA1-220ENST00000492859 BRK1Q8WUW1 75 aa3.3□□□□□ -1.88
BRCA1-220ENST00000492859 THTPAQ9BU02 230 aa3.3□□□□□ -1.88
BRCA1-220ENST00000492859 C11orf68Q9H3H3 251 aaKnown RBP3.3□□□□□ -1.88
BRCA1-220ENST00000492859 LIME1Q9H400 295 aa3.3□□□□□ -1.88
BRCA1-220ENST00000492859 HES2Q9Y543 173 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms