RNA–Protein interactions for RNA: ENST00000492626.5

SNX13-209, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,956 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-209ENST00000492626 TMEM72A0PK05 275 aa2.02□□□□□ -2.09
SNX13-209ENST00000492626 C7orf66A4D0T2 115 aa2.02□□□□□ -2.09
SNX13-209ENST00000492626 K7ERS5 55 aa2.02□□□□□ -2.09
SNX13-209ENST00000492626 AHSA1O95433 338 aa2.02□□□□□ -2.09
SNX13-209ENST00000492626 MSMBP08118 114 aa2.02□□□□□ -2.09
SNX13-209ENST00000492626 SOD3P08294 240 aa2.02□□□□□ -2.09
SNX13-209ENST00000492626 INAFM2P0DMQ5 153 aa2.02□□□□□ -2.09
SNX13-209ENST00000492626 NEDD8Q15843 81 aa2.02□□□□□ -2.09
SNX13-209ENST00000492626 TEX261Q6UWH6 196 aa2.02□□□□□ -2.09
SNX13-209ENST00000492626 Q6ZT83 130 aa2.02□□□□□ -2.09
SNX13-209ENST00000492626 COMMD7Q86VX2 200 aa2.02□□□□□ -2.09
SNX13-209ENST00000492626 OR8J2Q8NGG1 315 aa2.02□□□□□ -2.09
SNX13-209ENST00000492626 RASSF5Q8WWW0 418 aa2.02□□□□□ -2.09
SNX13-209ENST00000492626 NEURL3Q96EH8 262 aa2.02□□□□□ -2.09
SNX13-209ENST00000492626 ZNF414Q96IQ9 312 aa2.02□□□□□ -2.09
SNX13-209ENST00000492626 SERPINI1Q99574 410 aa2.02□□□□□ -2.09
SNX13-209ENST00000492626 METTL17Q9H7H0 456 aaPredicted RBP2.02□□□□□ -2.09
SNX13-209ENST00000492626 PRR34Q9NV39 138 aa2.02□□□□□ -2.09
SNX13-209ENST00000492626 U3KQ87 197 aa2.02□□□□□ -2.09
SNX13-209ENST00000492626 MEGF8Q7Z7M0 2845 aa2.02□□□□□ -2.09
SNX13-209ENST00000492626 FTCDNL1E5RQL4 147 aa2.02□□□□□ -2.09
SNX13-209ENST00000492626 H0YJW9 148 aa2.02□□□□□ -2.09
SNX13-209ENST00000492626 NRASP01111 189 aa2.02□□□□□ -2.09
SNX13-209ENST00000492626 HRASP01112 189 aa2.02□□□□□ -2.09
SNX13-209ENST00000492626 KRASP01116 189 aa2.02□□□□□ -2.09
SNX13-209ENST00000492626 IFNA6P05013 189 aa2.02□□□□□ -2.09
SNX13-209ENST00000492626 SERPINA6P08185 405 aa2.02□□□□□ -2.09
SNX13-209ENST00000492626 TLX1NBP0CAT3 122 aa2.02□□□□□ -2.09
SNX13-209ENST00000492626 IL3RAP26951 378 aa2.02□□□□□ -2.09
SNX13-209ENST00000492626 RAB13P51153 203 aa2.02□□□□□ -2.09
SNX13-209ENST00000492626 EMP2P54851 167 aa2.02□□□□□ -2.09
SNX13-209ENST00000492626 BAXQ07812 192 aa2.02□□□□□ -2.09
SNX13-209ENST00000492626 BAMBIQ13145 260 aa2.02□□□□□ -2.09
SNX13-209ENST00000492626 SSX1Q16384 188 aa2.02□□□□□ -2.09
SNX13-209ENST00000492626 TBPL2Q6SJ96 375 aa2.02□□□□□ -2.09
SNX13-209ENST00000492626 Q6ZR03 302 aa2.02□□□□□ -2.09
SNX13-209ENST00000492626 S100A7AQ86SG5 101 aa2.02□□□□□ -2.09
SNX13-209ENST00000492626 NT5DC3Q86UY8 548 aa2.02□□□□□ -2.09
SNX13-209ENST00000492626 SAXO1Q8IYX7 474 aa2.02□□□□□ -2.09
SNX13-209ENST00000492626 TMEM251Q8N6I4 163 aa2.02□□□□□ -2.09
SNX13-209ENST00000492626 SFT2D1Q8WV19 159 aa2.02□□□□□ -2.09
SNX13-209ENST00000492626 OR5P2Q8WZ92 322 aa2.02□□□□□ -2.09
SNX13-209ENST00000492626 TEX37Q96LM6 180 aa2.02□□□□□ -2.09
SNX13-209ENST00000492626 ALX4Q9H161 411 aaPredicted RBP2.02□□□□□ -2.09
SNX13-209ENST00000492626 LRRC19Q9H756 370 aa2.02□□□□□ -2.09
SNX13-209ENST00000492626 NIT2Q9NQR4 276 aa2.02□□□□□ -2.09
SNX13-209ENST00000492626 CMTM6Q9NX76 183 aa2.02□□□□□ -2.09
SNX13-209ENST00000492626 OPTCQ9UBM4 332 aa2.02□□□□□ -2.09
SNX13-209ENST00000492626 TANC2Q9HCD6 1990 aa2.01□□□□□ -2.09
SNX13-209ENST00000492626 C5orf42Q9H799 3197 aa2.01□□□□□ -2.09
SNX13-209ENST00000492626 IFNA16P05015 189 aa2.01□□□□□ -2.09
SNX13-209ENST00000492626 CECR9P0C854 216 aa2.01□□□□□ -2.09
SNX13-209ENST00000492626 NCS1P62166 190 aa2.01□□□□□ -2.09
SNX13-209ENST00000492626 BTG2P78543 158 aa2.01□□□□□ -2.09
SNX13-209ENST00000492626 SYCNQ0VAF6 134 aa2.01□□□□□ -2.09
SNX13-209ENST00000492626 COX19Q49B96 90 aa2.01□□□□□ -2.09
SNX13-209ENST00000492626 KLHL12Q53G59 568 aa2.01□□□□□ -2.09
SNX13-209ENST00000492626 LRRC25Q8N386 305 aaPredicted RBP2.01□□□□□ -2.09
SNX13-209ENST00000492626 Q8N7P7 452 aa2.01□□□□□ -2.09
SNX13-209ENST00000492626 YIPF7Q8N8F6 280 aa2.01□□□□□ -2.09
SNX13-209ENST00000492626 OR8A1Q8NGG7 326 aa2.01□□□□□ -2.09
SNX13-209ENST00000492626 SLC7A6Q92536 515 aa2.01□□□□□ -2.09
SNX13-209ENST00000492626 FMC1Q96HJ9 113 aa2.01□□□□□ -2.09
SNX13-209ENST00000492626 WFDC1Q9HC57 220 aa2.01□□□□□ -2.09
SNX13-209ENST00000492626 IGLV4-60A0A075B6I1 120 aa2.01□□□□□ -2.09
SNX13-209ENST00000492626 IGHV1-3A0A0C4DH29 117 aa2.01□□□□□ -2.09
SNX13-209ENST00000492626 K7EPK0 472 aa2.01□□□□□ -2.09
SNX13-209ENST00000492626 M0QXV9 152 aa2.01□□□□□ -2.09
SNX13-209ENST00000492626 HLA-AP01891 365 aaKnown RBP2.01□□□□□ -2.09
SNX13-209ENST00000492626 HIST1H1CP16403 213 aaKnown RBP2.01□□□□□ -2.09
SNX13-209ENST00000492626 GZMHP20718 246 aa2.01□□□□□ -2.09
SNX13-209ENST00000492626 LGALS7P47929 136 aa2.01□□□□□ -2.09
SNX13-209ENST00000492626 SERPINB9P50453 376 aa2.01□□□□□ -2.09
SNX13-209ENST00000492626 INSL3P51460 131 aa2.01□□□□□ -2.09
SNX13-209ENST00000492626 ACTBP60709 375 aa2.01□□□□□ -2.09
SNX13-209ENST00000492626 LSM3P62310 102 aaKnown RBP2.01□□□□□ -2.09
SNX13-209ENST00000492626 FAM53BQ14153 422 aa2.01□□□□□ -2.09
SNX13-209ENST00000492626 ZNF846Q147U1 533 aa2.01□□□□□ -2.09
SNX13-209ENST00000492626 PDK2Q15119 407 aa2.01□□□□□ -2.09
SNX13-209ENST00000492626 ZCCHC24Q8N2G6 241 aaKnown RBP2.01□□□□□ -2.09
SNX13-209ENST00000492626 GRPEL2Q8TAA5 225 aa2.01□□□□□ -2.09
SNX13-209ENST00000492626 DSCAMO60469 2012 aa2.01□□□□□ -2.09
SNX13-209ENST00000492626 IGKV1-27A0A075B6S5 117 aa2.01□□□□□ -2.09
SNX13-209ENST00000492626 TRAV8-3A0A0A6YYJ7 113 aa2.01□□□□□ -2.09
SNX13-209ENST00000492626 IL7P13232 177 aa2.01□□□□□ -2.09
SNX13-209ENST00000492626 ADCYAP1P18509 176 aa2.01□□□□□ -2.09
SNX13-209ENST00000492626 MDKP21741 143 aaPredicted RBP2.01□□□□□ -2.09
SNX13-209ENST00000492626 FLI1Q01543 452 aaPredicted RBP2.01□□□□□ -2.09
SNX13-209ENST00000492626 PAFAH1B3Q15102 231 aaKnown RBP2.01□□□□□ -2.09
SNX13-209ENST00000492626 MED27Q6P2C8 311 aa2.01□□□□□ -2.09
SNX13-209ENST00000492626 RBPMSQ93062 196 aaKnown RBP2.01□□□□□ -2.09
SNX13-209ENST00000492626 PLEKHJ1Q9NW61 149 aa2.01□□□□□ -2.09
SNX13-209ENST00000492626 KLK5Q9Y337 293 aaPredicted RBP2.01□□□□□ -2.09
SNX13-209ENST00000492626 M0QYV0 167 aa2□□□□□ -2.09
SNX13-209ENST00000492626 ARPC5O15511 151 aa2□□□□□ -2.09
SNX13-209ENST00000492626 OR2B3O76000 313 aa2□□□□□ -2.09
SNX13-209ENST00000492626 GADD45GO95257 159 aa2□□□□□ -2.09
SNX13-209ENST00000492626 IGF2P01344 180 aa2□□□□□ -2.09
SNX13-209ENST00000492626 UGT2B7P16662 529 aa2□□□□□ -2.09
SNX13-209ENST00000492626 AGTR1P30556 359 aa2□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms