RNA–Protein interactions for RNA: ENST00000492606.1

UBR4-215, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 314 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-215ENST00000492606 ZNF229Q9UJW7 825 aa2.29□□□□□ -2.04
UBR4-215ENST00000492606 IFT52Q9Y366 437 aa2.29□□□□□ -2.04
UBR4-215ENST00000492606 CSDC2Q9Y534 153 aaKnown RBP2.29□□□□□ -2.04
UBR4-215ENST00000492606 MPC1Q9Y5U8 109 aa2.29□□□□□ -2.04
UBR4-215ENST00000492606 IGKV3-7A0A075B6H7 116 aa2.28□□□□□ -2.04
UBR4-215ENST00000492606 KBTBD11-OT1A0A1B0GTJ5 212 aa2.28□□□□□ -2.04
UBR4-215ENST00000492606 TCRBV9S1A1TA0A576 114 aa2.28□□□□□ -2.04
UBR4-215ENST00000492606 SMIM9A6NGZ8 99 aa2.28□□□□□ -2.04
UBR4-215ENST00000492606 E7ESA3 106 aa2.28□□□□□ -2.04
UBR4-215ENST00000492606 KPNA4O00629 521 aaPredicted RBP2.28□□□□□ -2.04
UBR4-215ENST00000492606 LYPLA1O75608 230 aaPredicted RBP2.28□□□□□ -2.04
UBR4-215ENST00000492606 SERF1AO75920 110 aa2.28□□□□□ -2.04
UBR4-215ENST00000492606 PRH1P02810 166 aa2.28□□□□□ -2.04
UBR4-215ENST00000492606 DEFB130BP0DP73 79 aa2.28□□□□□ -2.04
UBR4-215ENST00000492606 DEFB130AP0DP74 79 aa2.28□□□□□ -2.04
UBR4-215ENST00000492606 NR2C1P13056 603 aa2.28□□□□□ -2.04
UBR4-215ENST00000492606 GABRR1P24046 479 aa2.28□□□□□ -2.04
UBR4-215ENST00000492606 ERP29P30040 261 aaKnown RBP2.28□□□□□ -2.04
UBR4-215ENST00000492606 HTR1FP30939 366 aa2.28□□□□□ -2.04
UBR4-215ENST00000492606 MAGEA12P43365 314 aa2.28□□□□□ -2.04
UBR4-215ENST00000492606 MAP2K4P45985 399 aa2.28□□□□□ -2.04
UBR4-215ENST00000492606 RHOGP84095 191 aa2.28□□□□□ -2.04
UBR4-215ENST00000492606 LCE3CQ5T5A8 94 aa2.28□□□□□ -2.04
UBR4-215ENST00000492606 KDM4DQ6B0I6 523 aa2.28□□□□□ -2.04
UBR4-215ENST00000492606 SLC25A48Q6ZT89 311 aaKnown RBP2.28□□□□□ -2.04
UBR4-215ENST00000492606 ZNF664Q8N3J9 261 aa2.28□□□□□ -2.04
UBR4-215ENST00000492606 GRPEL2Q8TAA5 225 aa2.28□□□□□ -2.04
UBR4-215ENST00000492606 TCTEX1D2Q8WW35 142 aa2.28□□□□□ -2.04
UBR4-215ENST00000492606 RASSF5Q8WWW0 418 aa2.28□□□□□ -2.04
UBR4-215ENST00000492606 GPR22Q99680 433 aa2.28□□□□□ -2.04
UBR4-215ENST00000492606 PBOV1Q9GZY1 135 aa2.28□□□□□ -2.04
UBR4-215ENST00000492606 C20orf85Q9H1P6 137 aa2.28□□□□□ -2.04
UBR4-215ENST00000492606 AIG1Q9NVV5 245 aa2.28□□□□□ -2.04
UBR4-215ENST00000492606 KIF25Q9UIL4 384 aa2.28□□□□□ -2.04
UBR4-215ENST00000492606 STK38LQ9Y2H1 464 aa2.28□□□□□ -2.04
UBR4-215ENST00000492606 ZNF729A6NN14 1252 aaPredicted RBP2.27□□□□□ -2.05
UBR4-215ENST00000492606 DNALI1O14645 258 aaPredicted RBP2.27□□□□□ -2.05
UBR4-215ENST00000492606 SLC16A7O60669 478 aa2.27□□□□□ -2.05
UBR4-215ENST00000492606 TSPAN13O95857 204 aa2.27□□□□□ -2.05
UBR4-215ENST00000492606 CA2P00918 260 aa2.27□□□□□ -2.05
UBR4-215ENST00000492606 TSPAN19P0C672 248 aa2.27□□□□□ -2.05
UBR4-215ENST00000492606 APELAP0DMC3 54 aa2.27□□□□□ -2.05
UBR4-215ENST00000492606 CACNG7P62955 275 aa2.27□□□□□ -2.05
UBR4-215ENST00000492606 GNG3P63215 75 aa2.27□□□□□ -2.05
UBR4-215ENST00000492606 ATP5G2Q06055 141 aa2.27□□□□□ -2.05
UBR4-215ENST00000492606 SS18Q15532 418 aa2.27□□□□□ -2.05
UBR4-215ENST00000492606 OR1Q1Q15612 314 aa2.27□□□□□ -2.05
UBR4-215ENST00000492606 ZNF79Q15937 498 aa2.27□□□□□ -2.05
UBR4-215ENST00000492606 Q6ZSR3 168 aa2.27□□□□□ -2.05
UBR4-215ENST00000492606 C3orf62Q6ZUJ4 267 aa2.27□□□□□ -2.05
UBR4-215ENST00000492606 LRRC34Q8IZ02 419 aa2.27□□□□□ -2.05
UBR4-215ENST00000492606 CCDC71LQ8N9Z2 235 aa2.27□□□□□ -2.05
UBR4-215ENST00000492606 OR10H4Q8NGA5 316 aa2.27□□□□□ -2.05
UBR4-215ENST00000492606 C7orf33Q8WU49 177 aa2.27□□□□□ -2.05
UBR4-215ENST00000492606 UFD1Q92890 307 aa2.27□□□□□ -2.05
UBR4-215ENST00000492606 FGGYQ96C11 551 aa2.27□□□□□ -2.05
UBR4-215ENST00000492606 TPD52L3Q96J77 140 aa2.27□□□□□ -2.05
UBR4-215ENST00000492606 PKNOX2Q96KN3 472 aa2.27□□□□□ -2.05
UBR4-215ENST00000492606 COA4Q9NYJ1 87 aa2.27□□□□□ -2.05
UBR4-215ENST00000492606 IDI2-AS1Q9NZ38 188 aa2.27□□□□□ -2.05
UBR4-215ENST00000492606 POLR1DQ9Y2S0 133 aa2.27□□□□□ -2.05
UBR4-215ENST00000492606 LY96Q9Y6Y9 160 aa2.27□□□□□ -2.05
UBR4-215ENST00000492606 A0A096LPF7 62 aa2.26□□□□□ -2.05
UBR4-215ENST00000492606 ODAMA1E959 279 aa2.26□□□□□ -2.05
UBR4-215ENST00000492606 PCP4L1A6NKN8 68 aa2.26□□□□□ -2.05
UBR4-215ENST00000492606 ZFP92A6NM28 416 aa2.26□□□□□ -2.05
UBR4-215ENST00000492606 SLC31A2O15432 143 aa2.26□□□□□ -2.05
UBR4-215ENST00000492606 CST4P01036 141 aa2.26□□□□□ -2.05
UBR4-215ENST00000492606 ATP5G1P05496 136 aa2.26□□□□□ -2.05
UBR4-215ENST00000492606 HSMCR30P0CW71 290 aa2.26□□□□□ -2.05
UBR4-215ENST00000492606 ATP5G3P48201 142 aa2.26□□□□□ -2.05
UBR4-215ENST00000492606 GSSP48637 474 aa2.26□□□□□ -2.05
UBR4-215ENST00000492606 PLP1P60201 277 aa2.26□□□□□ -2.05
UBR4-215ENST00000492606 PRKCDQ05655 676 aa2.26□□□□□ -2.05
UBR4-215ENST00000492606 OR5I1Q13606 314 aa2.26□□□□□ -2.05
UBR4-215ENST00000492606 IMPG1Q17R60 797 aa2.26□□□□□ -2.05
UBR4-215ENST00000492606 CEACAM21Q3KPI0 293 aa2.26□□□□□ -2.05
UBR4-215ENST00000492606 MOB1BQ7L9L4 216 aa2.26□□□□□ -2.05
UBR4-215ENST00000492606 KRTCAP2Q8N6L1 136 aa2.26□□□□□ -2.05
UBR4-215ENST00000492606 NKAPP1Q8N9T2 125 aa2.26□□□□□ -2.05
UBR4-215ENST00000492606 OR52I1Q8NGK6 324 aa2.26□□□□□ -2.05
UBR4-215ENST00000492606 REEP6Q96HR9 211 aa2.26□□□□□ -2.05
UBR4-215ENST00000492606 HINT2Q9BX68 163 aa2.26□□□□□ -2.05
UBR4-215ENST00000492606 RERGLQ9H628 205 aa2.26□□□□□ -2.05
UBR4-215ENST00000492606 THUMPD1Q9NXG2 353 aaKnown RBP2.26□□□□□ -2.05
UBR4-215ENST00000492606 TRBV9A0A0B4J1U6 114 aa2.25□□□□□ -2.05
UBR4-215ENST00000492606 XRCC2O43543 280 aa2.25□□□□□ -2.05
UBR4-215ENST00000492606 OR7A10O76100 309 aa2.25□□□□□ -2.05
UBR4-215ENST00000492606 TMEM50AO95807 157 aa2.25□□□□□ -2.05
UBR4-215ENST00000492606 PRM2P04554 102 aa2.25□□□□□ -2.05
UBR4-215ENST00000492606 MGMTP16455 207 aa2.25□□□□□ -2.05
UBR4-215ENST00000492606 GALP22466 123 aa2.25□□□□□ -2.05
UBR4-215ENST00000492606 SPRR2DP22532 72 aa2.25□□□□□ -2.05
UBR4-215ENST00000492606 BTCP35070 178 aa2.25□□□□□ -2.05
UBR4-215ENST00000492606 LGALS7P47929 136 aa2.25□□□□□ -2.05
UBR4-215ENST00000492606 FXYD3Q14802 87 aa2.25□□□□□ -2.05
UBR4-215ENST00000492606 KISS1Q15726 138 aa2.25□□□□□ -2.05
UBR4-215ENST00000492606 METTL21CQ5VZV1 264 aa2.25□□□□□ -2.05
UBR4-215ENST00000492606 PLEKHG7Q6ZR37 379 aa2.25□□□□□ -2.05
UBR4-215ENST00000492606 TMED4Q7Z7H5 227 aa2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms