RNA–Protein interactions for RNA: ENST00000492506.1

HDAC3-213, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 830 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-213ENST00000492506 OR5H2Q8NGV7 314 aa10.54□□□□□ -0.72
HDAC3-213ENST00000492506 SLAMF6Q96DU3 332 aa10.54□□□□□ -0.72
HDAC3-213ENST00000492506 OR8B4Q96RC9 309 aa10.54□□□□□ -0.72
HDAC3-213ENST00000492506 CABLES2Q9BTV7 478 aa10.54□□□□□ -0.72
HDAC3-213ENST00000492506 FGF23Q9GZV9 251 aaPredicted RBP10.54□□□□□ -0.72
HDAC3-213ENST00000492506 PLA2G2EQ9NZK7 142 aa10.54□□□□□ -0.72
HDAC3-213ENST00000492506 NAGKQ9UJ70 344 aa10.54□□□□□ -0.72
HDAC3-213ENST00000492506 TCF19Q9Y242 345 aa10.54□□□□□ -0.72
HDAC3-213ENST00000492506 RHBDD3Q9Y3P4 386 aa10.54□□□□□ -0.72
HDAC3-213ENST00000492506 STAB2Q8WWQ8 2551 aa10.54□□□□□ -0.72
HDAC3-213ENST00000492506 IGKV1D-17A0A075B6S4 117 aa10.53□□□□□ -0.72
HDAC3-213ENST00000492506 A6NDX4 124 aa10.53□□□□□ -0.72
HDAC3-213ENST00000492506 FAM90A8PA6NJQ4 464 aa10.53□□□□□ -0.72
HDAC3-213ENST00000492506 CA11O75493 328 aa10.53□□□□□ -0.72
HDAC3-213ENST00000492506 IFNA1P01562 189 aa10.53□□□□□ -0.72
HDAC3-213ENST00000492506 CSN2P05814 226 aa10.53□□□□□ -0.72
HDAC3-213ENST00000492506 PGA5P0DJD9 388 aa10.53□□□□□ -0.72
HDAC3-213ENST00000492506 ATP6V1FQ16864 119 aa10.53□□□□□ -0.72
HDAC3-213ENST00000492506 PET117Q6UWS5 81 aa10.53□□□□□ -0.72
HDAC3-213ENST00000492506 LHFPL1Q86WI0 220 aa10.53□□□□□ -0.72
HDAC3-213ENST00000492506 ZNRF1Q8ND25 227 aa10.53□□□□□ -0.72
HDAC3-213ENST00000492506 OR4X1Q8NH49 305 aa10.53□□□□□ -0.72
HDAC3-213ENST00000492506 FAM213BQ8TBF2 198 aa10.53□□□□□ -0.72
HDAC3-213ENST00000492506 TMEM230Q96A57 120 aa10.53□□□□□ -0.72
HDAC3-213ENST00000492506 REEP6Q96HR9 211 aa10.53□□□□□ -0.72
HDAC3-213ENST00000492506 OR5B12Q96R08 314 aa10.53□□□□□ -0.72
HDAC3-213ENST00000492506 B9D2Q9BPU9 175 aa10.53□□□□□ -0.72
HDAC3-213ENST00000492506 C5orf66Q9H5L9 145 aa10.53□□□□□ -0.72
HDAC3-213ENST00000492506 Q9N2K0 584 aa10.53□□□□□ -0.72
HDAC3-213ENST00000492506 ZNF319Q9P2F9 582 aa10.53□□□□□ -0.72
HDAC3-213ENST00000492506 HHLA2Q9UM44 414 aa10.53□□□□□ -0.72
HDAC3-213ENST00000492506 LYSTQ99698 3801 aa10.52□□□□□ -0.72
HDAC3-213ENST00000492506 SACSQ9NZJ4 4579 aa10.52□□□□□ -0.73
HDAC3-213ENST00000492506 PIGBOS1A0A0B4J2F0 54 aa10.52□□□□□ -0.73
HDAC3-213ENST00000492506 DHRS7CA6NNS2 312 aa10.52□□□□□ -0.73
HDAC3-213ENST00000492506 DIRAS3O95661 229 aa10.52□□□□□ -0.73
HDAC3-213ENST00000492506 TYMSP04818 313 aa10.52□□□□□ -0.73
HDAC3-213ENST00000492506 FAHP16930 419 aa10.52□□□□□ -0.73
HDAC3-213ENST00000492506 SERPINA2P20848 420 aa10.52□□□□□ -0.73
HDAC3-213ENST00000492506 VAMP2P63027 116 aa10.52□□□□□ -0.73
HDAC3-213ENST00000492506 PAFAH1B2P68402 229 aa10.52□□□□□ -0.73
HDAC3-213ENST00000492506 ROM1Q03395 351 aa10.52□□□□□ -0.73
HDAC3-213ENST00000492506 EGFEM1PQ0D2K5 195 aa10.52□□□□□ -0.73
HDAC3-213ENST00000492506 CNN3Q15417 329 aaKnown RBP10.52□□□□□ -0.73
HDAC3-213ENST00000492506 ZNF705AQ6ZN79 300 aaPredicted RBP10.52□□□□□ -0.73
HDAC3-213ENST00000492506 LHFPL4Q7Z7J7 247 aa10.52□□□□□ -0.73
HDAC3-213ENST00000492506 OR51L1Q8NGJ5 315 aa10.52□□□□□ -0.73
HDAC3-213ENST00000492506 AGMATQ9BSE5 352 aa10.52□□□□□ -0.73
HDAC3-213ENST00000492506 DNAJC4Q9NNZ3 241 aa10.52□□□□□ -0.73
HDAC3-213ENST00000492506 GPR84Q9NQS5 396 aa10.52□□□□□ -0.73
HDAC3-213ENST00000492506 CENPMQ9NSP4 180 aa10.52□□□□□ -0.73
HDAC3-213ENST00000492506 RNF150Q9ULK6 438 aa10.52□□□□□ -0.73
HDAC3-213ENST00000492506 BIRC6Q9NR09 4857 aa10.52□□□□□ -0.73
HDAC3-213ENST00000492506 A0A1W2PRX2 142 aa10.51□□□□□ -0.73
HDAC3-213ENST00000492506 ZNF878C9JN71 531 aa10.51□□□□□ -0.73
HDAC3-213ENST00000492506 GEMIN2O14893 280 aaKnown RBP10.51□□□□□ -0.73
HDAC3-213ENST00000492506 PITX3O75364 302 aa10.51□□□□□ -0.73
HDAC3-213ENST00000492506 NXPH2O95156 264 aa10.51□□□□□ -0.73
HDAC3-213ENST00000492506 ISG15P05161 165 aa10.51□□□□□ -0.73
HDAC3-213ENST00000492506 CTSDP07339 412 aaPredicted RBP10.51□□□□□ -0.73
HDAC3-213ENST00000492506 PSG2P11465 335 aa10.51□□□□□ -0.73
HDAC3-213ENST00000492506 RND3P61587 244 aa10.51□□□□□ -0.73
HDAC3-213ENST00000492506 BLCAPP62952 87 aa10.51□□□□□ -0.73
HDAC3-213ENST00000492506 CD69Q07108 199 aa10.51□□□□□ -0.73
HDAC3-213ENST00000492506 PMS2P11Q13670 270 aa10.51□□□□□ -0.73
HDAC3-213ENST00000492506 ICAM4Q14773 271 aa10.51□□□□□ -0.73
HDAC3-213ENST00000492506 TMEM95Q3KNT9 176 aa10.51□□□□□ -0.73
HDAC3-213ENST00000492506 ANKRD55Q3KP44 614 aa10.51□□□□□ -0.73
HDAC3-213ENST00000492506 TCTEX1D4Q5JR98 221 aa10.51□□□□□ -0.73
HDAC3-213ENST00000492506 LDLRAD2Q5SZI1 272 aa10.51□□□□□ -0.73
HDAC3-213ENST00000492506 OR8G2PQ6IF36 304 aa10.51□□□□□ -0.73
HDAC3-213ENST00000492506 ZNF343Q6P1L6 599 aa10.51□□□□□ -0.73
HDAC3-213ENST00000492506 TMEM219Q86XT9 240 aa10.51□□□□□ -0.73
HDAC3-213ENST00000492506 CHST4Q8NCG5 386 aa10.51□□□□□ -0.73
HDAC3-213ENST00000492506 CSNK2A3Q8NEV1 391 aa10.51□□□□□ -0.73
HDAC3-213ENST00000492506 OR13C9Q8NGT0 318 aa10.51□□□□□ -0.73
HDAC3-213ENST00000492506 OR5P3Q8WZ94 311 aa10.51□□□□□ -0.73
HDAC3-213ENST00000492506 MOB3AQ96BX8 217 aa10.51□□□□□ -0.73
HDAC3-213ENST00000492506 OR10C1Q96KK4 312 aa10.51□□□□□ -0.73
HDAC3-213ENST00000492506 HIST1H2AAQ96QV6 131 aa10.51□□□□□ -0.73
HDAC3-213ENST00000492506 PRSS22Q9GZN4 317 aa10.51□□□□□ -0.73
HDAC3-213ENST00000492506 SEPSECSQ9HD40 501 aaKnown RBP10.51□□□□□ -0.73
HDAC3-213ENST00000492506 GSKIPQ9P0R6 139 aa10.51□□□□□ -0.73
HDAC3-213ENST00000492506 SLC7A11Q9UPY5 501 aa10.51□□□□□ -0.73
HDAC3-213ENST00000492506 TENM2Q9NT68 2774 aa10.5□□□□□ -0.73
HDAC3-213ENST00000492506 LOC102723971A0A1B0GUV8 181 aa10.5□□□□□ -0.73
HDAC3-213ENST00000492506 ZNF727A8MUV8 499 aa10.5□□□□□ -0.73
HDAC3-213ENST00000492506 ZNF732B4DXR9 585 aa10.5□□□□□ -0.73
HDAC3-213ENST00000492506 RHBDL1O75783 438 aa10.5□□□□□ -0.73
HDAC3-213ENST00000492506 SCGB1D1O95968 90 aa10.5□□□□□ -0.73
HDAC3-213ENST00000492506 TOMM40O96008 361 aa10.5□□□□□ -0.73
HDAC3-213ENST00000492506 HPRT1P00492 218 aa10.5□□□□□ -0.73
HDAC3-213ENST00000492506 GABRA2P47869 451 aa10.5□□□□□ -0.73
HDAC3-213ENST00000492506 RPL29P47914 159 aaKnown RBP10.5□□□□□ -0.73
HDAC3-213ENST00000492506 RAB7AP51149 207 aa10.5□□□□□ -0.73
HDAC3-213ENST00000492506 SRPXP78539 464 aa10.5□□□□□ -0.73
HDAC3-213ENST00000492506 TMEM200BQ69YZ2 307 aa10.5□□□□□ -0.73
HDAC3-213ENST00000492506 TEX38Q6PEX7 206 aa10.5□□□□□ -0.73
HDAC3-213ENST00000492506 GBGT1Q8N5D6 347 aa10.5□□□□□ -0.73
HDAC3-213ENST00000492506 LRTM2Q8N967 370 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms