RNA–Protein interactions for RNA: ENST00000492280.5

HMGN1-220, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 2,707 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-220ENST00000492280 E7EUB6 86 aa10.17□□□□□ -0.78
HMGN1-220ENST00000492280 S100A9P06702 114 aaKnown RBP10.17□□□□□ -0.78
HMGN1-220ENST00000492280 C1QTNF9P0C862 333 aa10.17□□□□□ -0.78
HMGN1-220ENST00000492280 CHRNB4P30926 498 aa10.17□□□□□ -0.78
HMGN1-220ENST00000492280 FAM3BP58499 235 aaPredicted RBP10.17□□□□□ -0.78
HMGN1-220ENST00000492280 B2MP61769 119 aa10.17□□□□□ -0.78
HMGN1-220ENST00000492280 WFIKKN1Q96NZ8 548 aa10.17□□□□□ -0.78
HMGN1-220ENST00000492280 PCGF1Q9BSM1 259 aa10.17□□□□□ -0.78
HMGN1-220ENST00000492280 SEBOXQ9HB31 216 aaPredicted RBP10.17□□□□□ -0.78
HMGN1-220ENST00000492280 OR51B2Q9Y5P1 312 aa10.17□□□□□ -0.78
HMGN1-220ENST00000492280 TRBV20OR9-2A0A075B6H5 130 aa10.17□□□□□ -0.78
HMGN1-220ENST00000492280 GRNP28799 593 aaKnown RBP10.17□□□□□ -0.78
HMGN1-220ENST00000492280 RAB7AP51149 207 aa10.17□□□□□ -0.78
HMGN1-220ENST00000492280 ASPHD1Q5U4P2 390 aa10.17□□□□□ -0.78
HMGN1-220ENST00000492280 STPG3Q8N7X2 389 aa10.17□□□□□ -0.78
HMGN1-220ENST00000492280 IGFBPL1Q8WX77 278 aa10.17□□□□□ -0.78
HMGN1-220ENST00000492280 NEIL1Q96FI4 390 aaPredicted RBP10.17□□□□□ -0.78
HMGN1-220ENST00000492280 SCO2A0A1W2PP80 73 aa10.16□□□□□ -0.78
HMGN1-220ENST00000492280 H7BYZ3 331 aa10.16□□□□□ -0.78
HMGN1-220ENST00000492280 PLAUP00749 431 aa10.16□□□□□ -0.78
HMGN1-220ENST00000492280 MBP02144 154 aa10.16□□□□□ -0.78
HMGN1-220ENST00000492280 IL6RP08887 468 aaPredicted RBP10.16□□□□□ -0.78
HMGN1-220ENST00000492280 SAA1P0DJI8 122 aaPredicted RBP10.16□□□□□ -0.78
HMGN1-220ENST00000492280 PNRC1Q12796 327 aaPredicted RBP10.16□□□□□ -0.78
HMGN1-220ENST00000492280 C19orf35Q6ZS72 473 aa10.16□□□□□ -0.78
HMGN1-220ENST00000492280 C1QL4Q86Z23 238 aa10.16□□□□□ -0.78
HMGN1-220ENST00000492280 C1orf174Q8IYL3 243 aa10.16□□□□□ -0.78
HMGN1-220ENST00000492280 CTSZQ9UBR2 303 aa10.16□□□□□ -0.78
HMGN1-220ENST00000492280 RPUSD1Q9UJJ7 312 aaKnown RBP10.16□□□□□ -0.78
HMGN1-220ENST00000492280 ITPR1Q14643 2758 aa10.16□□□□□ -0.78
HMGN1-220ENST00000492280 IGKV1OR2-108A0A075B7D4 117 aa10.16□□□□□ -0.78
HMGN1-220ENST00000492280 LGALS4P56470 323 aa10.16□□□□□ -0.78
HMGN1-220ENST00000492280 OR10D4PQ8NGN7 298 aa10.16□□□□□ -0.78
HMGN1-220ENST00000492280 TMEM14BQ9NUH8 114 aa10.16□□□□□ -0.78
HMGN1-220ENST00000492280 MIOXQ9UGB7 285 aa10.16□□□□□ -0.78
HMGN1-220ENST00000492280 J3QR06 171 aa10.15□□□□□ -0.78
HMGN1-220ENST00000492280 RBFOX2O43251 390 aaKnown RBP eCLIP10.15□□□□□ -0.781e-18■□□□□ 8.3
HMGN1-220ENST00000492280 GALR1P47211 349 aa10.15□□□□□ -0.78
HMGN1-220ENST00000492280 HSPE1P61604 102 aaKnown RBP10.15□□□□□ -0.78
HMGN1-220ENST00000492280 PYY3Q5JQD4 70 aa10.15□□□□□ -0.78
HMGN1-220ENST00000492280 ENY2Q9NPA8 101 aa10.15□□□□□ -0.78
HMGN1-220ENST00000492280 YTHDF2Q9Y5A9 579 aaKnown RBP10.15□□□□□ -0.78
HMGN1-220ENST00000492280 CXorf65A6NEN9 183 aa10.15□□□□□ -0.78
HMGN1-220ENST00000492280 SMIM6P0DI80 62 aa10.15□□□□□ -0.78
HMGN1-220ENST00000492280 THBS3P49746 956 aa10.15□□□□□ -0.78
HMGN1-220ENST00000492280 RND2P52198 227 aa10.15□□□□□ -0.78
HMGN1-220ENST00000492280 TMEM200BQ69YZ2 307 aa10.15□□□□□ -0.78
HMGN1-220ENST00000492280 SLC25A48Q6ZT89 311 aaKnown RBP10.15□□□□□ -0.78
HMGN1-220ENST00000492280 LHFPL4Q7Z7J7 247 aa10.15□□□□□ -0.78
HMGN1-220ENST00000492280 HARBI1Q96MB7 349 aa10.15□□□□□ -0.78
HMGN1-220ENST00000492280 MANBALQ9NQG1 85 aa10.15□□□□□ -0.78
HMGN1-220ENST00000492280 TPSG1Q9NRR2 321 aa10.15□□□□□ -0.78
HMGN1-220ENST00000492280 ZNF729A6NN14 1252 aaPredicted RBP10.14□□□□□ -0.79
HMGN1-220ENST00000492280 B4DEV8 164 aa10.14□□□□□ -0.79
HMGN1-220ENST00000492280 FABP4P15090 132 aa10.14□□□□□ -0.79
HMGN1-220ENST00000492280 HOXA5P20719 270 aa10.14□□□□□ -0.79
HMGN1-220ENST00000492280 SSBP2P81877 361 aaPredicted RBP10.14□□□□□ -0.79
HMGN1-220ENST00000492280 AARDQ4LEZ3 155 aa10.14□□□□□ -0.79
HMGN1-220ENST00000492280 MIR17HGQ75NE6 70 aa10.14□□□□□ -0.79
HMGN1-220ENST00000492280 GSN-AS1Q9NRJ2 163 aa10.14□□□□□ -0.79
HMGN1-220ENST00000492280 TMEM250H0YL14 139 aa10.14□□□□□ -0.79
HMGN1-220ENST00000492280 LY6HO94772 140 aa10.14□□□□□ -0.79
HMGN1-220ENST00000492280 S100A8P05109 93 aa10.14□□□□□ -0.79
HMGN1-220ENST00000492280 REG1AP05451 166 aa10.14□□□□□ -0.79
HMGN1-220ENST00000492280 FABP1P07148 127 aa10.14□□□□□ -0.79
HMGN1-220ENST00000492280 S100PP25815 95 aa10.14□□□□□ -0.79
HMGN1-220ENST00000492280 EFNB3Q15768 340 aa10.14□□□□□ -0.79
HMGN1-220ENST00000492280 OR4P4Q8NGL7 312 aa10.14□□□□□ -0.79
HMGN1-220ENST00000492280 OR4X1Q8NH49 305 aa10.14□□□□□ -0.79
HMGN1-220ENST00000492280 OR9G1Q8NH87 305 aa10.14□□□□□ -0.79
HMGN1-220ENST00000492280 LINC01560Q8TB33 94 aa10.14□□□□□ -0.79
HMGN1-220ENST00000492280 RITA1Q96K30 269 aa10.14□□□□□ -0.79
HMGN1-220ENST00000492280 PLEKHA3Q9HB20 300 aa10.14□□□□□ -0.79
HMGN1-220ENST00000492280 DYNLRB1Q9NP97 96 aa10.14□□□□□ -0.79
HMGN1-220ENST00000492280 TRGV8A0A0C4DH27 118 aa10.13□□□□□ -0.79
HMGN1-220ENST00000492280 A0A1B0GUS0 222 aa10.13□□□□□ -0.79
HMGN1-220ENST00000492280 hADV38S2A0JD32 116 aa10.13□□□□□ -0.79
HMGN1-220ENST00000492280 NKX6-3A6NJ46 265 aa10.13□□□□□ -0.79
HMGN1-220ENST00000492280 FAM90A27PA6NNH2 459 aa10.13□□□□□ -0.79
HMGN1-220ENST00000492280 PFN1P07737 140 aaKnown RBP10.13□□□□□ -0.79
HMGN1-220ENST00000492280 TNFRSF1AP19438 455 aa10.13□□□□□ -0.79
HMGN1-220ENST00000492280 TBR1Q16650 682 aa10.13□□□□□ -0.79
HMGN1-220ENST00000492280 FAM78BQ5VT40 261 aa10.13□□□□□ -0.79
HMGN1-220ENST00000492280 NUP37Q8NFH4 326 aa10.13□□□□□ -0.79
HMGN1-220ENST00000492280 GGACTQ9BVM4 153 aa10.13□□□□□ -0.79
HMGN1-220ENST00000492280 FOXA2Q9Y261 457 aaPredicted RBP10.13□□□□□ -0.79
HMGN1-220ENST00000492280 LSM4Q9Y4Z0 139 aaKnown RBP10.13□□□□□ -0.79
HMGN1-220ENST00000492280 SEC14L6B5MCN3 397 aa10.13□□□□□ -0.79
HMGN1-220ENST00000492280 E7EQL1 145 aa10.13□□□□□ -0.79
HMGN1-220ENST00000492280 OR10J4P0C629 311 aa10.13□□□□□ -0.79
HMGN1-220ENST00000492280 OPRK1P41145 380 aa10.13□□□□□ -0.79
HMGN1-220ENST00000492280 TEX36Q5VZQ5 186 aa10.13□□□□□ -0.79
HMGN1-220ENST00000492280 TEPPQ6URK8 271 aa10.13□□□□□ -0.79
HMGN1-220ENST00000492280 LINC01551Q86U37 167 aa10.13□□□□□ -0.79
HMGN1-220ENST00000492280 OR52E5Q8NH55 327 aa10.13□□□□□ -0.79
HMGN1-220ENST00000492280 ZNF714Q96N38 554 aa10.13□□□□□ -0.79
HMGN1-220ENST00000492280 NPVFQ9HCQ7 196 aa10.13□□□□□ -0.79
HMGN1-220ENST00000492280 PPIAL4EA0A075B759 164 aa10.13□□□□□ -0.79
HMGN1-220ENST00000492280 TEX50A0A1B0GTY4 177 aa10.13□□□□□ -0.79
HMGN1-220ENST00000492280 PPIAL4DF5H284 164 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms