RNA–Protein interactions for RNA: ENST00000491433.1

CLCNKA-206, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 3

Gene CLCNKA, Length 824 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-206ENST00000491433 FAM106AQ4KMX7 169 aa8.31□□□□□ -1.08
CLCNKA-206ENST00000491433 RNASE12Q5GAN4 147 aaKnown RBP8.31□□□□□ -1.08
CLCNKA-206ENST00000491433 MZT2BQ6NZ67 158 aa8.31□□□□□ -1.08
CLCNKA-206ENST00000491433 C5orf24Q7Z6I8 188 aa8.31□□□□□ -1.08
CLCNKA-206ENST00000491433 LHFPL1Q86WI0 220 aa8.31□□□□□ -1.08
CLCNKA-206ENST00000491433 GPHB5Q86YW7 130 aa8.31□□□□□ -1.08
CLCNKA-206ENST00000491433 KIR2DL5AQ8N109 375 aa8.31□□□□□ -1.08
CLCNKA-206ENST00000491433 STPG3Q8N7X2 389 aa8.31□□□□□ -1.08
CLCNKA-206ENST00000491433 ZNF383Q8NA42 475 aa8.31□□□□□ -1.08
CLCNKA-206ENST00000491433 DRAXINQ8NBI3 349 aaPredicted RBP8.31□□□□□ -1.08
CLCNKA-206ENST00000491433 NECAP1Q8NC96 275 aa8.31□□□□□ -1.08
CLCNKA-206ENST00000491433 OR4D10Q8NGI6 311 aa8.31□□□□□ -1.08
CLCNKA-206ENST00000491433 KIR2DL5BQ8NHK3 375 aa8.31□□□□□ -1.08
CLCNKA-206ENST00000491433 MRGPRFQ96AM1 343 aa8.31□□□□□ -1.08
CLCNKA-206ENST00000491433 HARBI1Q96MB7 349 aa8.31□□□□□ -1.08
CLCNKA-206ENST00000491433 COPZ2Q9P299 210 aa8.31□□□□□ -1.08
CLCNKA-206ENST00000491433 ZNF230Q9UIE0 474 aaPredicted RBP8.31□□□□□ -1.08
CLCNKA-206ENST00000491433 ANXA10Q9UJ72 324 aa8.31□□□□□ -1.08
CLCNKA-206ENST00000491433 A0A1B0GVY2 172 aa8.3□□□□□ -1.08
CLCNKA-206ENST00000491433 CENPXA8MT69 81 aa8.3□□□□□ -1.08
CLCNKA-206ENST00000491433 TRDCB7Z8K6 153 aa8.3□□□□□ -1.08
CLCNKA-206ENST00000491433 SHOXO15266 292 aa8.3□□□□□ -1.08
CLCNKA-206ENST00000491433 RAB3DO95716 219 aa8.3□□□□□ -1.08
CLCNKA-206ENST00000491433 IGLV2-23P01705 113 aa8.3□□□□□ -1.08
CLCNKA-206ENST00000491433 CRYGBP07316 175 aa8.3□□□□□ -1.08
CLCNKA-206ENST00000491433 RRASP10301 218 aa8.3□□□□□ -1.08
CLCNKA-206ENST00000491433 SSBP2P81877 361 aaPredicted RBP8.3□□□□□ -1.08
CLCNKA-206ENST00000491433 EWSR1Q01844 656 aaKnown RBP eCLIP8.3□□□□□ -1.08
CLCNKA-206ENST00000491433 PJVKQ0ZLH3 352 aa8.3□□□□□ -1.08
CLCNKA-206ENST00000491433 MEF2DQ14814 521 aa8.3□□□□□ -1.08
CLCNKA-206ENST00000491433 RTL8BQ17RB0 113 aa8.3□□□□□ -1.08
CLCNKA-206ENST00000491433 DEFB135Q30KP9 77 aa8.3□□□□□ -1.08
CLCNKA-206ENST00000491433 TM4SF20Q53R12 229 aa8.3□□□□□ -1.08
CLCNKA-206ENST00000491433 RBPMS2Q6ZRY4 209 aaKnown RBP8.3□□□□□ -1.08
CLCNKA-206ENST00000491433 TMEM61Q8N0U2 210 aa8.3□□□□□ -1.08
CLCNKA-206ENST00000491433 ARRDC1Q8N5I2 433 aa8.3□□□□□ -1.08
CLCNKA-206ENST00000491433 TEX45Q8NA69 505 aa8.3□□□□□ -1.08
CLCNKA-206ENST00000491433 OR1L6Q8NGR2 347 aa8.3□□□□□ -1.08
CLCNKA-206ENST00000491433 MARC2Q969Z3 335 aa8.3□□□□□ -1.08
CLCNKA-206ENST00000491433 RNF183Q96D59 192 aa8.3□□□□□ -1.08
CLCNKA-206ENST00000491433 SPIN2AQ99865 258 aa8.3□□□□□ -1.08
CLCNKA-206ENST00000491433 SPIN2BQ9BPZ2 258 aa8.3□□□□□ -1.08
CLCNKA-206ENST00000491433 IGKV1-6A0A0C4DH72 117 aa8.29□□□□□ -1.08
CLCNKA-206ENST00000491433 ACTL6BO94805 426 aa8.29□□□□□ -1.08
CLCNKA-206ENST00000491433 NDUFB6O95139 128 aa8.29□□□□□ -1.08
CLCNKA-206ENST00000491433 TCRBP04435 133 aa8.29□□□□□ -1.08
CLCNKA-206ENST00000491433 GSTT2P0CG29 244 aa8.29□□□□□ -1.08
CLCNKA-206ENST00000491433 HLA-DMAP28067 261 aa8.29□□□□□ -1.08
CLCNKA-206ENST00000491433 FAUP35544 74 aaKnown RBP8.29□□□□□ -1.08
CLCNKA-206ENST00000491433 INPP1P49441 399 aa8.29□□□□□ -1.08
CLCNKA-206ENST00000491433 TAS2R46P59540 309 aa8.29□□□□□ -1.08
CLCNKA-206ENST00000491433 CDK10Q15131 360 aa8.29□□□□□ -1.08
CLCNKA-206ENST00000491433 TNXAQ16473 311 aa8.29□□□□□ -1.08
CLCNKA-206ENST00000491433 TMEM177Q53S58 311 aa8.29□□□□□ -1.08
CLCNKA-206ENST00000491433 OR13C8Q8NGS7 320 aa8.29□□□□□ -1.08
CLCNKA-206ENST00000491433 GIMAP1Q8WWP7 306 aa8.29□□□□□ -1.08
CLCNKA-206ENST00000491433 SRSF12Q8WXF0 261 aaKnown RBP8.29□□□□□ -1.08
CLCNKA-206ENST00000491433 CABLES2Q9BTV7 478 aa8.29□□□□□ -1.08
CLCNKA-206ENST00000491433 IFT46Q9NQC8 304 aa8.29□□□□□ -1.08
CLCNKA-206ENST00000491433 HSPG2P98160 4391 aa8.28□□□□□ -1.08
CLCNKA-206ENST00000491433 TRBV6-7A0A0A0MS04 114 aa8.28□□□□□ -1.08
CLCNKA-206ENST00000491433 LINC00854A0A1B0GVQ3 168 aa8.28□□□□□ -1.08
CLCNKA-206ENST00000491433 A8MWP6 167 aa8.28□□□□□ -1.08
CLCNKA-206ENST00000491433 M0QYG6 137 aa8.28□□□□□ -1.08
CLCNKA-206ENST00000491433 M0R1X1 148 aa8.28□□□□□ -1.08
CLCNKA-206ENST00000491433 PROP1O75360 226 aa8.28□□□□□ -1.08
CLCNKA-206ENST00000491433 SCAF4O95104 1147 aaKnown RBP8.28□□□□□ -1.08
CLCNKA-206ENST00000491433 SCTP09683 121 aa8.28□□□□□ -1.08
CLCNKA-206ENST00000491433 CTXN2P0C2S0 81 aa8.28□□□□□ -1.08
CLCNKA-206ENST00000491433 APELAP0DMC3 54 aa8.28□□□□□ -1.08
CLCNKA-206ENST00000491433 HRH1P35367 487 aa8.28□□□□□ -1.08
CLCNKA-206ENST00000491433 CCR6P51684 374 aa8.28□□□□□ -1.08
CLCNKA-206ENST00000491433 HLA-DRB3P79483 266 aa8.28□□□□□ -1.08
CLCNKA-206ENST00000491433 MRPS15P82914 257 aaKnown RBP8.28□□□□□ -1.08
CLCNKA-206ENST00000491433 RBMS2Q15434 407 aaKnown RBP8.28□□□□□ -1.08
CLCNKA-206ENST00000491433 TRIM16LQ309B1 348 aa8.28□□□□□ -1.08
CLCNKA-206ENST00000491433 C15orf32Q32M92 178 aa8.28□□□□□ -1.08
CLCNKA-206ENST00000491433 RNASE10Q5GAN6 216 aaKnown RBP8.28□□□□□ -1.08
CLCNKA-206ENST00000491433 AADACL3Q5VUY0 350 aa8.28□□□□□ -1.08
CLCNKA-206ENST00000491433 FAAP20Q6NZ36 180 aa8.28□□□□□ -1.08
CLCNKA-206ENST00000491433 TTC9CQ8N5M4 171 aa8.28□□□□□ -1.08
CLCNKA-206ENST00000491433 OR2C3Q8N628 320 aa8.28□□□□□ -1.08
CLCNKA-206ENST00000491433 UXS1Q8NBZ7 420 aa8.28□□□□□ -1.08
CLCNKA-206ENST00000491433 OR51S1Q8NGJ8 323 aa8.28□□□□□ -1.08
CLCNKA-206ENST00000491433 OR4A4PQ8NGN8 299 aa8.28□□□□□ -1.08
CLCNKA-206ENST00000491433 TERB2Q8NHR7 220 aa8.28□□□□□ -1.08
CLCNKA-206ENST00000491433 C2CD4CQ8TF44 421 aa8.28□□□□□ -1.08
CLCNKA-206ENST00000491433 CHAC2Q8WUX2 184 aa8.28□□□□□ -1.08
CLCNKA-206ENST00000491433 SLC25A21Q9BQT8 299 aaPredicted RBP8.28□□□□□ -1.08
CLCNKA-206ENST00000491433 FBXL7Q9UJT9 491 aa8.28□□□□□ -1.08
CLCNKA-206ENST00000491433 A0A1B0GVG6 124 aa8.27□□□□□ -1.09
CLCNKA-206ENST00000491433 FAM240BA0A1B0GVZ2 78 aa8.27□□□□□ -1.09
CLCNKA-206ENST00000491433 ZNF320A2RRD8 509 aa8.27□□□□□ -1.09
CLCNKA-206ENST00000491433 DISC1C4P0D8 188 aa8.27□□□□□ -1.09
CLCNKA-206ENST00000491433 PPP5D1E7EU14 171 aa8.27□□□□□ -1.09
CLCNKA-206ENST00000491433 FABP7O15540 132 aa8.27□□□□□ -1.09
CLCNKA-206ENST00000491433 RBMXL2O75526 392 aaKnown RBP8.27□□□□□ -1.09
CLCNKA-206ENST00000491433 OR2C1O95371 312 aa8.27□□□□□ -1.09
CLCNKA-206ENST00000491433 PMP2P02689 132 aa8.27□□□□□ -1.09
CLCNKA-206ENST00000491433 RBMY1A1P0DJD3 496 aaKnown RBP8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms