RNA–Protein interactions for RNA: ENST00000491183.5

HMGN1-219, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 527 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-219ENST00000491183 ZC4H2Q9NQZ6 224 aa13.57□□□□□ -0.24
HMGN1-219ENST00000491183 NDUFA4L2Q9NRX3 87 aa13.57□□□□□ -0.24
HMGN1-219ENST00000491183 NSG2Q9Y328 171 aa13.57□□□□□ -0.24
HMGN1-219ENST00000491183 ZNF320A2RRD8 509 aa13.56□□□□□ -0.24
HMGN1-219ENST00000491183 SERPINE2P07093 398 aa13.56□□□□□ -0.24
HMGN1-219ENST00000491183 OR13C7P0DN81 318 aa13.56□□□□□ -0.24
HMGN1-219ENST00000491183 CD81P60033 236 aa13.56□□□□□ -0.24
HMGN1-219ENST00000491183 TSPAN5P62079 268 aa13.56□□□□□ -0.24
HMGN1-219ENST00000491183 CTF1Q16619 201 aa13.56□□□□□ -0.24
HMGN1-219ENST00000491183 FAM106AQ4KMX7 169 aa13.56□□□□□ -0.24
HMGN1-219ENST00000491183 CASC10Q5T4H9 136 aa13.56□□□□□ -0.24
HMGN1-219ENST00000491183 LAX1Q8IWV1 398 aa13.56□□□□□ -0.24
HMGN1-219ENST00000491183 OR1L8Q8NGR8 309 aa13.56□□□□□ -0.24
HMGN1-219ENST00000491183 PLEKHA3Q9HB20 300 aa13.56□□□□□ -0.24
HMGN1-219ENST00000491183 TECRQ9NZ01 308 aaKnown RBP13.56□□□□□ -0.24
HMGN1-219ENST00000491183 DBX1A6NMT0 343 aa13.55□□□□□ -0.24
HMGN1-219ENST00000491183 A8MWP6 167 aa13.55□□□□□ -0.24
HMGN1-219ENST00000491183 PTBP1P26599 531 aaKnown RBP eCLIP13.55□□□□□ -0.24
HMGN1-219ENST00000491183 GPR183P32249 361 aa13.55□□□□□ -0.24
HMGN1-219ENST00000491183 RCVRNP35243 200 aa13.55□□□□□ -0.24
HMGN1-219ENST00000491183 MFAP2P55001 183 aa13.55□□□□□ -0.24
HMGN1-219ENST00000491183 THOC7Q6I9Y2 204 aaKnown RBP13.55□□□□□ -0.24
HMGN1-219ENST00000491183 UNQ9165/PRO28630Q6UXU0 137 aa13.55□□□□□ -0.24
HMGN1-219ENST00000491183 GDPD1Q8N9F7 314 aa13.55□□□□□ -0.24
HMGN1-219ENST00000491183 WDR89Q96FK6 387 aaPredicted RBP13.55□□□□□ -0.24
HMGN1-219ENST00000491183 EDA2RQ9HAV5 297 aa13.55□□□□□ -0.24
HMGN1-219ENST00000491183 GABARAPO95166 117 aa13.54□□□□□ -0.24
HMGN1-219ENST00000491183 UCP3P55916 312 aa13.54□□□□□ -0.24
HMGN1-219ENST00000491183 GUCA2BQ16661 112 aa13.54□□□□□ -0.24
HMGN1-219ENST00000491183 TM4SF20Q53R12 229 aa13.54□□□□□ -0.24
HMGN1-219ENST00000491183 SLC25A24Q6NUK1 477 aa13.54□□□□□ -0.24
HMGN1-219ENST00000491183 LPCAT3Q6P1A2 487 aa13.54□□□□□ -0.24
HMGN1-219ENST00000491183 HSD17B13Q7Z5P4 300 aaPredicted RBP13.54□□□□□ -0.24
HMGN1-219ENST00000491183 TBC1D26Q86UD7 250 aa13.54□□□□□ -0.24
HMGN1-219ENST00000491183 DEFB125Q8N687 156 aa13.54□□□□□ -0.24
HMGN1-219ENST00000491183 UXS1Q8NBZ7 420 aa13.54□□□□□ -0.24
HMGN1-219ENST00000491183 VN1R17PQ8TDU5 208 aa13.54□□□□□ -0.24
HMGN1-219ENST00000491183 SPATA25Q9BR10 227 aa13.54□□□□□ -0.24
HMGN1-219ENST00000491183 HINT2Q9BX68 163 aa13.54□□□□□ -0.24
HMGN1-219ENST00000491183 WFDC10AQ9H1F0 79 aa13.54□□□□□ -0.24
HMGN1-219ENST00000491183 SLC2A8Q9NY64 477 aa13.54□□□□□ -0.24
HMGN1-219ENST00000491183 THYN1Q9P016 225 aa13.54□□□□□ -0.24
HMGN1-219ENST00000491183 MLXQ9UH92 298 aa13.54□□□□□ -0.24
HMGN1-219ENST00000491183 OR51B2Q9Y5P1 312 aa13.54□□□□□ -0.24
HMGN1-219ENST00000491183 IGHV3-35A0A0C4DH35 117 aa13.53□□□□□ -0.24
HMGN1-219ENST00000491183 M0QYG6 137 aa13.53□□□□□ -0.24
HMGN1-219ENST00000491183 SNAPC5O75971 98 aa13.53□□□□□ -0.24
HMGN1-219ENST00000491183 TPPPO94811 219 aa13.53□□□□□ -0.24
HMGN1-219ENST00000491183 IGKV1-39P01597 117 aa13.53□□□□□ -0.24
HMGN1-219ENST00000491183 IGKV1D-39P04432 117 aa13.53□□□□□ -0.24
HMGN1-219ENST00000491183 MZT2AQ6P582 158 aa13.53□□□□□ -0.24
HMGN1-219ENST00000491183 TMEM61Q8N0U2 210 aa13.53□□□□□ -0.24
HMGN1-219ENST00000491183 FAM212BQ9NTI7 297 aaPredicted RBP13.53□□□□□ -0.24
HMGN1-219ENST00000491183 KLK11Q9UBX7 282 aa13.53□□□□□ -0.24
HMGN1-219ENST00000491183 F11RQ9Y624 299 aaKnown RBP13.53□□□□□ -0.24
HMGN1-219ENST00000491183 RBMY1BA6NDE4 496 aaKnown RBP13.52□□□□□ -0.25
HMGN1-219ENST00000491183 RBMY1EA6NEQ0 496 aaKnown RBP13.52□□□□□ -0.25
HMGN1-219ENST00000491183 FAM25AB3EWG3 89 aa13.52□□□□□ -0.25
HMGN1-219ENST00000491183 FAM25CB3EWG5 89 aa13.52□□□□□ -0.25
HMGN1-219ENST00000491183 FAM25GB3EWG6 89 aa13.52□□□□□ -0.25
HMGN1-219ENST00000491183 RBMY1DP0C7P1 496 aaKnown RBP13.52□□□□□ -0.25
HMGN1-219ENST00000491183 C8orf88P0DMB2 117 aa13.52□□□□□ -0.25
HMGN1-219ENST00000491183 ZNF182P17025 639 aaPredicted RBP13.52□□□□□ -0.25
HMGN1-219ENST00000491183 RNASE12Q5GAN4 147 aaKnown RBP13.52□□□□□ -0.25
HMGN1-219ENST00000491183 GPR107Q5VW38 600 aa13.52□□□□□ -0.25
HMGN1-219ENST00000491183 ZNF57Q68EA5 555 aaPredicted RBP13.52□□□□□ -0.25
HMGN1-219ENST00000491183 PLET1Q6UQ28 207 aa13.52□□□□□ -0.25
HMGN1-219ENST00000491183 LSM10Q969L4 123 aaKnown RBP13.52□□□□□ -0.25
HMGN1-219ENST00000491183 SEC22AQ96IW7 307 aa13.52□□□□□ -0.25
HMGN1-219ENST00000491183 TMEM14BQ9NUH8 114 aa13.52□□□□□ -0.25
HMGN1-219ENST00000491183 PRNDQ9UKY0 176 aa13.52□□□□□ -0.25
HMGN1-219ENST00000491183 DNAH7Q8WXX0 4024 aa13.51□□□□□ -0.25
HMGN1-219ENST00000491183 IGHV3-21A0A0B4J1V1 117 aa13.51□□□□□ -0.25
HMGN1-219ENST00000491183 OR11H12B2RN74 326 aa13.51□□□□□ -0.25
HMGN1-219ENST00000491183 TGOLN2O43493 480 aa13.51□□□□□ -0.25
HMGN1-219ENST00000491183 LYL1P12980 280 aa13.51□□□□□ -0.25
HMGN1-219ENST00000491183 SLC38A6Q8IZM9 456 aa13.51□□□□□ -0.25
HMGN1-219ENST00000491183 OR52I2Q8NH67 350 aa13.51□□□□□ -0.25
HMGN1-219ENST00000491183 SCARB1Q8WTV0 552 aa13.51□□□□□ -0.25
HMGN1-219ENST00000491183 ABHD1Q96SE0 405 aa13.51□□□□□ -0.25
HMGN1-219ENST00000491183 ZNF436Q9C0F3 470 aaPredicted RBP13.51□□□□□ -0.25
HMGN1-219ENST00000491183 FKBP11Q9NYL4 201 aa13.51□□□□□ -0.25
HMGN1-219ENST00000491183 EXTL2Q9UBQ6 330 aa13.51□□□□□ -0.25
HMGN1-219ENST00000491183 CEPT1Q9Y6K0 416 aa13.51□□□□□ -0.25
HMGN1-219ENST00000491183 C15orf61A6NNL5 157 aa13.5□□□□□ -0.25
HMGN1-219ENST00000491183 F8W735 103 aaPredicted RBP13.5□□□□□ -0.25
HMGN1-219ENST00000491183 CYB5BO43169 146 aa13.5□□□□□ -0.25
HMGN1-219ENST00000491183 S100GP29377 79 aa13.5□□□□□ -0.25
HMGN1-219ENST00000491183 BTNL8Q6UX41 500 aa13.5□□□□□ -0.25
HMGN1-219ENST00000491183 LHFPL1Q86WI0 220 aa13.5□□□□□ -0.25
HMGN1-219ENST00000491183 OR5B3Q8NH48 314 aa13.5□□□□□ -0.25
HMGN1-219ENST00000491183 AP3S1Q92572 193 aa13.5□□□□□ -0.25
HMGN1-219ENST00000491183 HIPK2Q9H2X6 1198 aa13.5□□□□□ -0.25
HMGN1-219ENST00000491183 RETNQ9HD89 108 aa13.5□□□□□ -0.25
HMGN1-219ENST00000491183 PALMDQ9NP74 551 aa13.5□□□□□ -0.25
HMGN1-219ENST00000491183 OR2T8A6NH00 312 aa13.49□□□□□ -0.25
HMGN1-219ENST00000491183 K7EIM0 57 aa13.49□□□□□ -0.25
HMGN1-219ENST00000491183 SCAF4O95104 1147 aaKnown RBP13.49□□□□□ -0.25
HMGN1-219ENST00000491183 CD3DP04234 171 aa13.49□□□□□ -0.25
HMGN1-219ENST00000491183 ALDH3B2P48448 385 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms