RNA–Protein interactions for RNA: ENST00000491128.5

SMPD4-219, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 2,570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-219ENST00000491128 CGB1A6NKQ9 187 aa11.16□□□□□ -0.62
SMPD4-219ENST00000491128 PMS2P5A8MQ11 134 aa11.16□□□□□ -0.62
SMPD4-219ENST00000491128 ZNF705EA8MWA4 302 aaPredicted RBP11.16□□□□□ -0.62
SMPD4-219ENST00000491128 FAM157CP0CG43 387 aa11.16□□□□□ -0.62
SMPD4-219ENST00000491128 PLGLAQ15195 96 aa11.16□□□□□ -0.62
SMPD4-219ENST00000491128 PSG5Q15238 335 aa11.16□□□□□ -0.62
SMPD4-219ENST00000491128 TNXAQ16473 311 aa11.16□□□□□ -0.62
SMPD4-219ENST00000491128 Q5PR19 223 aa11.16□□□□□ -0.62
SMPD4-219ENST00000491128 KIR3DL3Q8N743 410 aa11.16□□□□□ -0.62
SMPD4-219ENST00000491128 C22orf15Q8WYQ4 148 aa11.16□□□□□ -0.62
SMPD4-219ENST00000491128 AJUBAQ96IF1 538 aa11.16□□□□□ -0.62
SMPD4-219ENST00000491128 ATP5SQ99766 215 aa11.16□□□□□ -0.62
SMPD4-219ENST00000491128 C7orf69Q9H7B7 122 aa11.16□□□□□ -0.62
SMPD4-219ENST00000491128 FBXO7Q9Y3I1 522 aa11.16□□□□□ -0.62
SMPD4-219ENST00000491128 PDZD2O15018 2839 aa11.16□□□□□ -0.62
SMPD4-219ENST00000491128 CA2P00918 260 aa11.16□□□□□ -0.62
SMPD4-219ENST00000491128 IFNA4P05014 189 aa11.16□□□□□ -0.62
SMPD4-219ENST00000491128 MSMBP08118 114 aa11.16□□□□□ -0.62
SMPD4-219ENST00000491128 BAXQ07812 192 aa11.16□□□□□ -0.62
SMPD4-219ENST00000491128 UNKLQ9H9P5 680 aaKnown RBP11.16□□□□□ -0.62
SMPD4-219ENST00000491128 PRNDQ9UKY0 176 aa11.16□□□□□ -0.62
SMPD4-219ENST00000491128 ITPR3Q14573 2671 aa11.15□□□□□ -0.62
SMPD4-219ENST00000491128 AKAP9Q99996 3911 aa11.15□□□□□ -0.62
SMPD4-219ENST00000491128 SMCO3A2RU48 225 aa11.15□□□□□ -0.62
SMPD4-219ENST00000491128 FAM90A9PA6NNJ1 464 aa11.15□□□□□ -0.62
SMPD4-219ENST00000491128 PAX8Q06710 450 aa11.15□□□□□ -0.62
SMPD4-219ENST00000491128 AARDQ4LEZ3 155 aa11.15□□□□□ -0.62
SMPD4-219ENST00000491128 FAM103A1Q9BTL3 118 aaKnown RBP11.15□□□□□ -0.62
SMPD4-219ENST00000491128 PLEKHA3Q9HB20 300 aa11.15□□□□□ -0.62
SMPD4-219ENST00000491128 CEACAM3P40198 252 aa11.15□□□□□ -0.63
SMPD4-219ENST00000491128 UBE2E1P51965 193 aa11.15□□□□□ -0.63
SMPD4-219ENST00000491128 TAS2R30P59541 319 aa11.15□□□□□ -0.63
SMPD4-219ENST00000491128 VMA21Q3ZAQ7 101 aa11.15□□□□□ -0.63
SMPD4-219ENST00000491128 ETV3LQ6ZN32 361 aa11.15□□□□□ -0.63
SMPD4-219ENST00000491128 OR10P1Q8NGE3 313 aa11.15□□□□□ -0.63
SMPD4-219ENST00000491128 OR2G3Q8NGZ4 309 aa11.15□□□□□ -0.63
SMPD4-219ENST00000491128 EAF1Q96JC9 268 aaPredicted RBP11.15□□□□□ -0.63
SMPD4-219ENST00000491128 ENY2Q9NPA8 101 aa11.15□□□□□ -0.63
SMPD4-219ENST00000491128 SH2D7A6NKC9 451 aaPredicted RBP11.14□□□□□ -0.63
SMPD4-219ENST00000491128 NCBP2LA6PVI3 153 aaKnown RBP11.14□□□□□ -0.63
SMPD4-219ENST00000491128 AGPAT2O15120 278 aa11.14□□□□□ -0.63
SMPD4-219ENST00000491128 OR8U8P0C7N1 319 aa11.14□□□□□ -0.63
SMPD4-219ENST00000491128 PRCDQ00LT1 54 aa11.14□□□□□ -0.63
SMPD4-219ENST00000491128 WT1-ASQ06250 92 aa11.14□□□□□ -0.63
SMPD4-219ENST00000491128 TUSC1Q2TAM9 212 aa11.14□□□□□ -0.63
SMPD4-219ENST00000491128 OR52E5Q8NH55 327 aa11.14□□□□□ -0.63
SMPD4-219ENST00000491128 TMEM167AQ8TBQ9 72 aa11.14□□□□□ -0.63
SMPD4-219ENST00000491128 PHYHIPLQ96FC7 376 aa11.14□□□□□ -0.63
SMPD4-219ENST00000491128 Q96MF0 132 aa11.14□□□□□ -0.63
SMPD4-219ENST00000491128 CIB3Q96Q77 187 aaPredicted RBP11.14□□□□□ -0.63
SMPD4-219ENST00000491128 GINS3Q9BRX5 216 aa11.14□□□□□ -0.63
SMPD4-219ENST00000491128 HRH4Q9H3N8 390 aa11.14□□□□□ -0.63
SMPD4-219ENST00000491128 SIGLEC9Q9Y336 463 aa11.14□□□□□ -0.63
SMPD4-219ENST00000491128 FGF2P09038 288 aa11.14□□□□□ -0.63
SMPD4-219ENST00000491128 DEFA4P12838 97 aa11.14□□□□□ -0.63
SMPD4-219ENST00000491128 ZNF266Q14584 549 aa11.14□□□□□ -0.63
SMPD4-219ENST00000491128 VSIRQ9H7M9 311 aa11.14□□□□□ -0.63
SMPD4-219ENST00000491128 MXRA5Q9NR99 2828 aa11.14□□□□□ -0.63
SMPD4-219ENST00000491128 ACANP16112 2415 aa11.13□□□□□ -0.63
SMPD4-219ENST00000491128 A0A096LNT2 108 aa11.13□□□□□ -0.63
SMPD4-219ENST00000491128 NPFFO15130 113 aa11.13□□□□□ -0.63
SMPD4-219ENST00000491128 TGFAP01135 160 aa11.13□□□□□ -0.63
SMPD4-219ENST00000491128 SPP1P10451 314 aa11.13□□□□□ -0.63
SMPD4-219ENST00000491128 LGALS7P47929 136 aa11.13□□□□□ -0.63
SMPD4-219ENST00000491128 HBG1P69891 147 aa11.13□□□□□ -0.63
SMPD4-219ENST00000491128 HBG2P69892 147 aa11.13□□□□□ -0.63
SMPD4-219ENST00000491128 AKR1C1Q04828 323 aa11.13□□□□□ -0.63
SMPD4-219ENST00000491128 SLC24A4Q8NFF2 622 aa11.13□□□□□ -0.63
SMPD4-219ENST00000491128 LINC00052Q96N35 136 aa11.13□□□□□ -0.63
SMPD4-219ENST00000491128 TSNAXQ99598 290 aaKnown RBP11.13□□□□□ -0.63
SMPD4-219ENST00000491128 NDUFA4L2Q9NRX3 87 aa11.13□□□□□ -0.63
SMPD4-219ENST00000491128 SONP18583 2426 aaKnown RBP11.13□□□□□ -0.63
SMPD4-219ENST00000491128 CUBNO60494 3623 aa11.13□□□□□ -0.63
SMPD4-219ENST00000491128 IGHV3-21A0A0B4J1V1 117 aa11.13□□□□□ -0.63
SMPD4-219ENST00000491128 PRH1P02810 166 aa11.13□□□□□ -0.63
SMPD4-219ENST00000491128 OR13C7P0DN81 318 aa11.13□□□□□ -0.63
SMPD4-219ENST00000491128 AREGP15514 252 aa11.13□□□□□ -0.63
SMPD4-219ENST00000491128 NPY1RP25929 384 aa11.13□□□□□ -0.63
SMPD4-219ENST00000491128 PRSS8Q16651 343 aa11.13□□□□□ -0.63
SMPD4-219ENST00000491128 PPP1R27Q86WC6 154 aa11.13□□□□□ -0.63
SMPD4-219ENST00000491128 REG4Q9BYZ8 158 aa11.13□□□□□ -0.63
SMPD4-219ENST00000491128 ARV1Q9H2C2 271 aa11.13□□□□□ -0.63
SMPD4-219ENST00000491128 FLNAP21333 2647 aaKnown RBP11.12□□□□□ -0.63
SMPD4-219ENST00000491128 ACTL6BO94805 426 aa11.12□□□□□ -0.63
SMPD4-219ENST00000491128 IFNA5P01569 189 aa11.12□□□□□ -0.63
SMPD4-219ENST00000491128 PAX1P15863 534 aa11.12□□□□□ -0.63
SMPD4-219ENST00000491128 ELLP55199 621 aaPredicted RBP11.12□□□□□ -0.63
SMPD4-219ENST00000491128 SSBP2P81877 361 aaPredicted RBP11.12□□□□□ -0.63
SMPD4-219ENST00000491128 ZNF616Q08AN1 781 aa11.12□□□□□ -0.63
SMPD4-219ENST00000491128 BTN1A1Q13410 526 aa11.12□□□□□ -0.63
SMPD4-219ENST00000491128 WFDC11Q8NEX6 87 aa11.12□□□□□ -0.63
SMPD4-219ENST00000491128 VSTM2AQ8TAG5 236 aa11.12□□□□□ -0.63
SMPD4-219ENST00000491128 RNF141Q8WVD5 230 aa11.12□□□□□ -0.63
SMPD4-219ENST00000491128 A0A0U1RQK1 487 aa11.12□□□□□ -0.63
SMPD4-219ENST00000491128 B4DSR2 109 aa11.12□□□□□ -0.63
SMPD4-219ENST00000491128 MOSP00540 346 aa11.12□□□□□ -0.63
SMPD4-219ENST00000491128 Q6ZRG5 221 aa11.12□□□□□ -0.63
SMPD4-219ENST00000491128 TMEM219Q86XT9 240 aa11.12□□□□□ -0.63
SMPD4-219ENST00000491128 CIARTQ8N365 385 aaPredicted RBP11.12□□□□□ -0.63
SMPD4-219ENST00000491128 OR1L8Q8NGR8 309 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms