RNA–Protein interactions for RNA: ENST00000490993.5

NPHP3-208, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 5,197 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-208ENST00000490993 TEX50A0A1B0GTY4 177 aa6.05□□□□□ -1.44
NPHP3-208ENST00000490993 TPPP2P59282 170 aa6.05□□□□□ -1.44
NPHP3-208ENST00000490993 CCL20P78556 96 aa6.05□□□□□ -1.44
NPHP3-208ENST00000490993 OR5AU1Q8NGC0 362 aa6.05□□□□□ -1.44
NPHP3-208ENST00000490993 HILPDAQ9Y5L2 63 aa6.05□□□□□ -1.44
NPHP3-208ENST00000490993 LHBP01229 141 aa6.05□□□□□ -1.44
NPHP3-208ENST00000490993 IGHV1-8P0DP01 117 aa6.05□□□□□ -1.44
NPHP3-208ENST00000490993 FOLR2P14207 255 aa6.05□□□□□ -1.44
NPHP3-208ENST00000490993 ZNF672Q499Z4 452 aaPredicted RBP6.05□□□□□ -1.44
NPHP3-208ENST00000490993 PRR27Q6MZM9 219 aa6.05□□□□□ -1.44
NPHP3-208ENST00000490993 TMEM37Q8WXS4 190 aa6.05□□□□□ -1.44
NPHP3-208ENST00000490993 PIMREGQ9BSJ6 248 aa6.05□□□□□ -1.44
NPHP3-208ENST00000490993 TMEM242Q9NWH2 141 aa6.05□□□□□ -1.44
NPHP3-208ENST00000490993 CHEK1O14757 476 aa6.05□□□□□ -1.44
NPHP3-208ENST00000490993 SLC31A2O15432 143 aa6.05□□□□□ -1.44
NPHP3-208ENST00000490993 THBDP07204 575 aa6.05□□□□□ -1.44
NPHP3-208ENST00000490993 IGFBP2P18065 325 aa6.05□□□□□ -1.44
NPHP3-208ENST00000490993 PAX6P26367 422 aa6.05□□□□□ -1.44
NPHP3-208ENST00000490993 SUMO1P63165 101 aaKnown RBP6.05□□□□□ -1.44
NPHP3-208ENST00000490993 SSX2Q16385 188 aa6.05□□□□□ -1.44
NPHP3-208ENST00000490993 PDZD11Q5EBL8 140 aa6.05□□□□□ -1.44
NPHP3-208ENST00000490993 TREML4Q6UXN2 200 aa6.05□□□□□ -1.44
NPHP3-208ENST00000490993 ZCCHC24Q8N2G6 241 aaKnown RBP6.05□□□□□ -1.44
NPHP3-208ENST00000490993 ZNF383Q8NA42 475 aa6.05□□□□□ -1.44
NPHP3-208ENST00000490993 TMEM167AQ8TBQ9 72 aa6.05□□□□□ -1.44
NPHP3-208ENST00000490993 TMEM190Q8WZ59 177 aa6.05□□□□□ -1.44
NPHP3-208ENST00000490993 OR51M1Q9H341 326 aa6.05□□□□□ -1.44
NPHP3-208ENST00000490993 CHODLQ9H9P2 273 aa6.05□□□□□ -1.44
NPHP3-208ENST00000490993 CPAMD8Q8IZJ3 1885 aa6.04□□□□□ -1.44
NPHP3-208ENST00000490993 A0A1W2PRD5 423 aa6.04□□□□□ -1.44
NPHP3-208ENST00000490993 A0A1W2PRF3 423 aa6.04□□□□□ -1.44
NPHP3-208ENST00000490993 A0A1W2PRM7 423 aa6.04□□□□□ -1.44
NPHP3-208ENST00000490993 E7EQL1 145 aa6.04□□□□□ -1.44
NPHP3-208ENST00000490993 CCKARP32238 428 aa6.04□□□□□ -1.44
NPHP3-208ENST00000490993 C17orf58Q2M2W7 97 aa6.04□□□□□ -1.44
NPHP3-208ENST00000490993 TMEM177Q53S58 311 aa6.04□□□□□ -1.44
NPHP3-208ENST00000490993 HCP5Q6MZN7 132 aa6.04□□□□□ -1.44
NPHP3-208ENST00000490993 OR51G1Q8NGK1 321 aa6.04□□□□□ -1.44
NPHP3-208ENST00000490993 NPIPB3Q92617 1050 aa6.04□□□□□ -1.44
NPHP3-208ENST00000490993 FCN1O00602 326 aa6.04□□□□□ -1.44
NPHP3-208ENST00000490993 GOSR1O95249 250 aa6.04□□□□□ -1.44
NPHP3-208ENST00000490993 HIST1H1EP10412 219 aaKnown RBP6.04□□□□□ -1.44
NPHP3-208ENST00000490993 TMEM11P17152 192 aa6.04□□□□□ -1.44
NPHP3-208ENST00000490993 CD69Q07108 199 aa6.04□□□□□ -1.44
NPHP3-208ENST00000490993 SEM1Q6ZVN7 128 aa6.04□□□□□ -1.44
NPHP3-208ENST00000490993 LYPD6BQ8NI32 183 aa6.04□□□□□ -1.44
NPHP3-208ENST00000490993 EML5Q05BV3 1969 aa6.04□□□□□ -1.44
NPHP3-208ENST00000490993 C15orf62A8K5M9 175 aa6.04□□□□□ -1.44
NPHP3-208ENST00000490993 H0YJW9 148 aa6.04□□□□□ -1.44
NPHP3-208ENST00000490993 TMEM50AO95807 157 aa6.04□□□□□ -1.44
NPHP3-208ENST00000490993 CLEC2AQ6UVW9 174 aa6.04□□□□□ -1.44
NPHP3-208ENST00000490993 NAT8BQ9UHF3 227 aa6.04□□□□□ -1.44
NPHP3-208ENST00000490993 ADAMTS20P59510 1910 aa6.04□□□□□ -1.44
NPHP3-208ENST00000490993 ZNF407Q9C0G0 2248 aa6.04□□□□□ -1.44
NPHP3-208ENST00000490993 C20orf202A1L168 122 aa6.04□□□□□ -1.44
NPHP3-208ENST00000490993 ZNF785A8K8V0 405 aa6.04□□□□□ -1.44
NPHP3-208ENST00000490993 RRHO14718 337 aa6.04□□□□□ -1.44
NPHP3-208ENST00000490993 BMI1P35226 326 aa6.04□□□□□ -1.44
NPHP3-208ENST00000490993 LCN2P80188 198 aa6.04□□□□□ -1.44
NPHP3-208ENST00000490993 SIGLECL1Q8N7X8 197 aa6.04□□□□□ -1.44
NPHP3-208ENST00000490993 DMRTA2Q96SC8 542 aa6.04□□□□□ -1.44
NPHP3-208ENST00000490993 VSIRQ9H7M9 311 aa6.04□□□□□ -1.44
NPHP3-208ENST00000490993 FAM157AC9JC47 383 aa6.03□□□□□ -1.44
NPHP3-208ENST00000490993 HSBP1L1C9JCN9 74 aa6.03□□□□□ -1.44
NPHP3-208ENST00000490993 MOSP00540 346 aa6.03□□□□□ -1.44
NPHP3-208ENST00000490993 FABP4P15090 132 aa6.03□□□□□ -1.44
NPHP3-208ENST00000490993 HIST1H1BP16401 226 aaKnown RBP6.03□□□□□ -1.44
NPHP3-208ENST00000490993 MFAP4P55083 255 aa6.03□□□□□ -1.44
NPHP3-208ENST00000490993 DEFA6Q01524 100 aa6.03□□□□□ -1.44
NPHP3-208ENST00000490993 TMEM155Q4W5P6 130 aa6.03□□□□□ -1.44
NPHP3-208ENST00000490993 LINC00311Q8N616 119 aa6.03□□□□□ -1.44
NPHP3-208ENST00000490993 SGMS2Q8NHU3 365 aa6.03□□□□□ -1.44
NPHP3-208ENST00000490993 AGMATQ9BSE5 352 aa6.03□□□□□ -1.44
NPHP3-208ENST00000490993 ZNF586Q9NXT0 402 aa6.03□□□□□ -1.44
NPHP3-208ENST00000490993 EXPH5Q8NEV8 1989 aa6.03□□□□□ -1.44
NPHP3-208ENST00000490993 TRAV9-1A0A075B6T8 112 aa6.03□□□□□ -1.44
NPHP3-208ENST00000490993 TGIF2-C20orf24A0A0A6YYL0 155 aa6.03□□□□□ -1.44
NPHP3-208ENST00000490993 IGHV2-26A0A0B4J1V2 119 aa6.03□□□□□ -1.44
NPHP3-208ENST00000490993 MT-ND6P03923 174 aa6.03□□□□□ -1.44
NPHP3-208ENST00000490993 RD3LP0DJH9 198 aa6.03□□□□□ -1.44
NPHP3-208ENST00000490993 CD99P14209 185 aa6.03□□□□□ -1.44
NPHP3-208ENST00000490993 RANP62826 216 aaKnown RBP6.03□□□□□ -1.44
NPHP3-208ENST00000490993 SPSB3Q6PJ21 355 aa6.03□□□□□ -1.44
NPHP3-208ENST00000490993 C8orf31Q8N9H6 132 aa6.03□□□□□ -1.44
NPHP3-208ENST00000490993 OR10D4PQ8NGN7 298 aa6.03□□□□□ -1.44
NPHP3-208ENST00000490993 ADCYAP1P18509 176 aa6.03□□□□□ -1.44
NPHP3-208ENST00000490993 AGAP20933 346 aa6.03□□□□□ -1.44
NPHP3-208ENST00000490993 FXYD3Q14802 87 aa6.03□□□□□ -1.44
NPHP3-208ENST00000490993 SMUG1Q53HV7 270 aa6.03□□□□□ -1.44
NPHP3-208ENST00000490993 ZNF833PQ6ZTB9 187 aa6.03□□□□□ -1.44
NPHP3-208ENST00000490993 SFRP2Q96HF1 295 aa6.03□□□□□ -1.44
NPHP3-208ENST00000490993 GRAMD2BQ96HH9 432 aa6.03□□□□□ -1.44
NPHP3-208ENST00000490993 GGTLC1Q9BX51 225 aa6.03□□□□□ -1.44
NPHP3-208ENST00000490993 SRD5A3Q9H8P0 318 aa6.03□□□□□ -1.44
NPHP3-208ENST00000490993 KAAG1Q9UBP8 84 aa6.03□□□□□ -1.44
NPHP3-208ENST00000490993 PCNX2A6NKB5 2137 aa6.03□□□□□ -1.44
NPHP3-208ENST00000490993 OOSP1A8MZH6 123 aa6.03□□□□□ -1.44
NPHP3-208ENST00000490993 M0R1W7 72 aa6.03□□□□□ -1.44
NPHP3-208ENST00000490993 NDUFS6O75380 124 aaKnown RBP6.03□□□□□ -1.44
NPHP3-208ENST00000490993 LOXL3P58215 753 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms