RNA–Protein interactions for RNA: ENST00000490751.1

LDB1-204, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-204ENST00000490751 SNAPC5O75971 98 aa23.74■■□□□ 1.39
LDB1-204ENST00000490751 OR13C7P0DN81 318 aa23.74■■□□□ 1.39
LDB1-204ENST00000490751 FOLR2P14207 255 aa23.74■■□□□ 1.39
LDB1-204ENST00000490751 ALDH3B2P48448 385 aa23.74■■□□□ 1.39
LDB1-204ENST00000490751 UCP3P55916 312 aa23.74■■□□□ 1.39
LDB1-204ENST00000490751 WT1-ASQ06250 92 aa23.74■■□□□ 1.39
LDB1-204ENST00000490751 HSD17B13Q7Z5P4 300 aaPredicted RBP23.74■■□□□ 1.39
LDB1-204ENST00000490751 SLC38A6Q8IZM9 456 aa23.74■■□□□ 1.39
LDB1-204ENST00000490751 GDPD1Q8N9F7 314 aa23.74■■□□□ 1.39
LDB1-204ENST00000490751 HINT2Q9BX68 163 aa23.74■■□□□ 1.39
LDB1-204ENST00000490751 THYN1Q9P016 225 aa23.74■■□□□ 1.39
LDB1-204ENST00000490751 OR51B2Q9Y5P1 312 aa23.74■■□□□ 1.39
LDB1-204ENST00000490751 OR52I2Q8NH67 350 aa23.73■■□□□ 1.39
LDB1-204ENST00000490751 NDUFA4L2Q9NRX3 87 aa23.73■■□□□ 1.39
LDB1-204ENST00000490751 FAM212BQ9NTI7 297 aaPredicted RBP23.73■■□□□ 1.39
LDB1-204ENST00000490751 KLK11Q9UBX7 282 aa23.73■■□□□ 1.39
LDB1-204ENST00000490751 KMT2CQ8NEZ4 4911 aaKnown RBP23.73■■□□□ 1.39
LDB1-204ENST00000490751 CLEC3BP05452 202 aa23.72■■□□□ 1.39
LDB1-204ENST00000490751 SERPINE2P07093 398 aa23.72■■□□□ 1.39
LDB1-204ENST00000490751 DEFB114Q30KQ6 69 aa23.72■■□□□ 1.39
LDB1-204ENST00000490751 FAM106AQ4KMX7 169 aa23.72■■□□□ 1.39
LDB1-204ENST00000490751 ZNF502Q8TBZ5 544 aa23.72■■□□□ 1.39
LDB1-204ENST00000490751 ZC4H2Q9NQZ6 224 aa23.72■■□□□ 1.39
LDB1-204ENST00000490751 CYB5BO43169 146 aa23.71■■□□□ 1.39
LDB1-204ENST00000490751 GPR183P32249 361 aa23.71■■□□□ 1.39
LDB1-204ENST00000490751 RNASE10Q5GAN6 216 aaKnown RBP23.71■■□□□ 1.39
LDB1-204ENST00000490751 CACNG8Q8WXS5 425 aa23.71■■□□□ 1.39
LDB1-204ENST00000490751 LSM10Q969L4 123 aaKnown RBP23.71■■□□□ 1.39
LDB1-204ENST00000490751 TM2D3Q9BRN9 247 aa23.71■■□□□ 1.39
LDB1-204ENST00000490751 PRNDQ9UKY0 176 aa23.71■■□□□ 1.39
LDB1-204ENST00000490751 ZNF320A2RRD8 509 aa23.7■■□□□ 1.38
LDB1-204ENST00000490751 IFNA6P05013 189 aa23.7■■□□□ 1.38
LDB1-204ENST00000490751 PTBP1P26599 531 aaKnown RBP eCLIP23.7■■□□□ 1.38
LDB1-204ENST00000490751 ABHD1Q96SE0 405 aa23.7■■□□□ 1.38
LDB1-204ENST00000490751 TSC22D3Q99576 134 aa23.7■■□□□ 1.38
LDB1-204ENST00000490751 TMEM213A2RRL7 107 aa23.69■■□□□ 1.38
LDB1-204ENST00000490751 CBLN1P23435 193 aa23.69■■□□□ 1.38
LDB1-204ENST00000490751 SLC25A24Q6NUK1 477 aa23.69■■□□□ 1.38
LDB1-204ENST00000490751 LAX1Q8IWV1 398 aa23.69■■□□□ 1.38
LDB1-204ENST00000490751 FKBP11Q9NYL4 201 aa23.69■■□□□ 1.38
LDB1-204ENST00000490751 TECRQ9NZ01 308 aaKnown RBP23.69■■□□□ 1.38
LDB1-204ENST00000490751 MTFP1Q9UDX5 166 aa23.69■■□□□ 1.38
LDB1-204ENST00000490751 F11RQ9Y624 299 aaKnown RBP23.69■■□□□ 1.38
LDB1-204ENST00000490751 DBX1A6NMT0 343 aa23.68■■□□□ 1.38
LDB1-204ENST00000490751 C15orf61A6NNL5 157 aa23.68■■□□□ 1.38
LDB1-204ENST00000490751 ZNF785A8K8V0 405 aa23.68■■□□□ 1.38
LDB1-204ENST00000490751 A8MWP6 167 aa23.68■■□□□ 1.38
LDB1-204ENST00000490751 TPPPO94811 219 aa23.68■■□□□ 1.38
LDB1-204ENST00000490751 CD3DP04234 171 aa23.68■■□□□ 1.38
LDB1-204ENST00000490751 CD81P60033 236 aa23.68■■□□□ 1.38
LDB1-204ENST00000490751 SPCS2Q15005 226 aa23.68■■□□□ 1.38
LDB1-204ENST00000490751 OR5B3Q8NH48 314 aa23.68■■□□□ 1.38
LDB1-204ENST00000490751 VN1R17PQ8TDU5 208 aa23.68■■□□□ 1.38
LDB1-204ENST00000490751 SEC22AQ96IW7 307 aa23.68■■□□□ 1.38
LDB1-204ENST00000490751 MIXL1Q9H2W2 232 aa23.68■■□□□ 1.38
LDB1-204ENST00000490751 TUBA4BQ9H853 241 aa23.68■■□□□ 1.38
LDB1-204ENST00000490751 IGKV1-39P01597 117 aa23.67■■□□□ 1.38
LDB1-204ENST00000490751 IGKV1D-39P04432 117 aa23.67■■□□□ 1.38
LDB1-204ENST00000490751 PGAM2P15259 253 aa23.67■■□□□ 1.38
LDB1-204ENST00000490751 MFAP2P55001 183 aa23.67■■□□□ 1.38
LDB1-204ENST00000490751 LHFPL1Q86WI0 220 aa23.67■■□□□ 1.38
LDB1-204ENST00000490751 ARRDC1Q8N5I2 433 aa23.67■■□□□ 1.38
LDB1-204ENST00000490751 C15orf40Q8WUR7 153 aa23.67■■□□□ 1.38
LDB1-204ENST00000490751 TMEM56Q96MV1 263 aa23.67■■□□□ 1.38
LDB1-204ENST00000490751 TMEM14BQ9NUH8 114 aa23.67■■□□□ 1.38
LDB1-204ENST00000490751 SELENOKQ9Y6D0 94 aa23.67■■□□□ 1.38
LDB1-204ENST00000490751 RGS5O15539 181 aa23.66■■□□□ 1.38
LDB1-204ENST00000490751 TBPP20226 339 aa23.66■■□□□ 1.38
LDB1-204ENST00000490751 GUCA2BQ16661 112 aa23.66■■□□□ 1.38
LDB1-204ENST00000490751 PLET1Q6UQ28 207 aa23.66■■□□□ 1.38
LDB1-204ENST00000490751 MRGPRFQ96AM1 343 aa23.66■■□□□ 1.38
LDB1-204ENST00000490751 NEURL2Q9BR09 285 aa23.66■■□□□ 1.38
LDB1-204ENST00000490751 PLEKHA3Q9HB20 300 aa23.66■■□□□ 1.38
LDB1-204ENST00000490751 SLC2A8Q9NY64 477 aa23.66■■□□□ 1.38
LDB1-204ENST00000490751 PI3P19957 117 aa23.65■■□□□ 1.38
LDB1-204ENST00000490751 UNQ9165/PRO28630Q6UXU0 137 aa23.65■■□□□ 1.38
LDB1-204ENST00000490751 H2BFWTQ7Z2G1 175 aa23.65■■□□□ 1.38
LDB1-204ENST00000490751 CLVS1Q8IUQ0 354 aaPredicted RBP23.65■■□□□ 1.38
LDB1-204ENST00000490751 WDR89Q96FK6 387 aaPredicted RBP23.65■■□□□ 1.38
LDB1-204ENST00000490751 ZNF486Q96H40 463 aaPredicted RBP23.65■■□□□ 1.38
LDB1-204ENST00000490751 IGHV3-35A0A0C4DH35 117 aa23.64■■□□□ 1.37
LDB1-204ENST00000490751 TGOLN2O43493 480 aa23.64■■□□□ 1.37
LDB1-204ENST00000490751 CD7P09564 240 aa23.64■■□□□ 1.37
LDB1-204ENST00000490751 RND3P61587 244 aa23.64■■□□□ 1.37
LDB1-204ENST00000490751 UXS1Q8NBZ7 420 aa23.64■■□□□ 1.37
LDB1-204ENST00000490751 IGHV3-21A0A0B4J1V1 117 aa23.63■■□□□ 1.37
LDB1-204ENST00000490751 CTDSP2O14595 271 aa23.63■■□□□ 1.37
LDB1-204ENST00000490751 PPP5CP53041 499 aa23.63■■□□□ 1.37
LDB1-204ENST00000490751 HAGHQ16775 308 aa23.63■■□□□ 1.37
LDB1-204ENST00000490751 TM4SF20Q53R12 229 aa23.63■■□□□ 1.37
LDB1-204ENST00000490751 OR4D10Q8NGI6 311 aa23.63■■□□□ 1.37
LDB1-204ENST00000490751 OR4A16Q8NH70 328 aa23.63■■□□□ 1.37
LDB1-204ENST00000490751 PALMDQ9NP74 551 aa23.63■■□□□ 1.37
LDB1-204ENST00000490751 MLXQ9UH92 298 aa23.63■■□□□ 1.37
LDB1-204ENST00000490751 OR2T8A6NH00 312 aa23.62■■□□□ 1.37
LDB1-204ENST00000490751 C3orf84H3BNL1 204 aa23.62■■□□□ 1.37
LDB1-204ENST00000490751 PIGPP57054 158 aa23.62■■□□□ 1.37
LDB1-204ENST00000490751 TAS2R19P59542 299 aa23.62■■□□□ 1.37
LDB1-204ENST00000490751 ZNF57Q68EA5 555 aaPredicted RBP23.62■■□□□ 1.37
LDB1-204ENST00000490751 TMEM61Q8N0U2 210 aa23.62■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms