RNA–Protein interactions for RNA: ENST00000490653.1

PRPF4B-208, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 2

Gene PRPF4B, Length 581 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-208ENST00000490653 COMMD3Q9UBI1 195 aa5.52□□□□□ -1.53
PRPF4B-208ENST00000490653 PLA2G2DQ9UNK4 145 aa5.52□□□□□ -1.53
PRPF4B-208ENST00000490653 MRPS7Q9Y2R9 242 aaKnown RBP5.52□□□□□ -1.53
PRPF4B-208ENST00000490653 LCE6AA0A183 80 aa5.51□□□□□ -1.53
PRPF4B-208ENST00000490653 IGLC7A0M8Q6 106 aa5.51□□□□□ -1.53
PRPF4B-208ENST00000490653 C2orf70A6NJV1 201 aa5.51□□□□□ -1.53
PRPF4B-208ENST00000490653 FAM223BA6NKX1 122 aa5.51□□□□□ -1.53
PRPF4B-208ENST00000490653 NPIPB5A8MRT5 1133 aa5.51□□□□□ -1.53
PRPF4B-208ENST00000490653 HPGDSO60760 199 aa5.51□□□□□ -1.53
PRPF4B-208ENST00000490653 HPRT1P00492 218 aa5.51□□□□□ -1.53
PRPF4B-208ENST00000490653 HRASP01112 189 aa5.51□□□□□ -1.53
PRPF4B-208ENST00000490653 SMIM18P0DKX4 95 aa5.51□□□□□ -1.53
PRPF4B-208ENST00000490653 ELK1P19419 428 aa5.51□□□□□ -1.53
PRPF4B-208ENST00000490653 PRSS3P35030 304 aa5.51□□□□□ -1.53
PRPF4B-208ENST00000490653 RPL8P62917 257 aaKnown RBP5.51□□□□□ -1.53
PRPF4B-208ENST00000490653 HAGHQ16775 308 aa5.51□□□□□ -1.53
PRPF4B-208ENST00000490653 TATDN3Q17R31 274 aa5.51□□□□□ -1.53
PRPF4B-208ENST00000490653 RNASE12Q5GAN4 147 aaKnown RBP5.51□□□□□ -1.53
PRPF4B-208ENST00000490653 UBE2NLQ5JXB2 153 aa5.51□□□□□ -1.53
PRPF4B-208ENST00000490653 SNX29P2Q8IUI4 249 aa5.51□□□□□ -1.53
PRPF4B-208ENST00000490653 FAM223AQ8IWN6 122 aa5.51□□□□□ -1.53
PRPF4B-208ENST00000490653 DEFB125Q8N687 156 aa5.51□□□□□ -1.53
PRPF4B-208ENST00000490653 NECAP1Q8NC96 275 aa5.51□□□□□ -1.53
PRPF4B-208ENST00000490653 GPX8Q8TED1 209 aa5.51□□□□□ -1.53
PRPF4B-208ENST00000490653 FCAMRQ8WWV6 532 aa5.51□□□□□ -1.53
PRPF4B-208ENST00000490653 SLC25A46Q96AG3 418 aa5.51□□□□□ -1.53
PRPF4B-208ENST00000490653 MOB3AQ96BX8 217 aa5.51□□□□□ -1.53
PRPF4B-208ENST00000490653 TM2D3Q9BRN9 247 aa5.51□□□□□ -1.53
PRPF4B-208ENST00000490653 KRTAP3-1Q9BYR8 98 aa5.51□□□□□ -1.53
PRPF4B-208ENST00000490653 RETNQ9HD89 108 aa5.51□□□□□ -1.53
PRPF4B-208ENST00000490653 HRASLSQ9HDD0 168 aa5.51□□□□□ -1.53
PRPF4B-208ENST00000490653 IFT46Q9NQC8 304 aa5.51□□□□□ -1.53
PRPF4B-208ENST00000490653 TMEM140Q9NV12 185 aa5.51□□□□□ -1.53
PRPF4B-208ENST00000490653 ZNF257Q9Y2Q1 563 aa5.51□□□□□ -1.53
PRPF4B-208ENST00000490653 PLECQ15149 4684 aaKnown RBP5.51□□□□□ -1.53
PRPF4B-208ENST00000490653 IGLV11-55A0A075B6I3 123 aa5.5□□□□□ -1.53
PRPF4B-208ENST00000490653 DPPA5A6NC42 116 aa5.5□□□□□ -1.53
PRPF4B-208ENST00000490653 RBMY1BA6NDE4 496 aaKnown RBP5.5□□□□□ -1.53
PRPF4B-208ENST00000490653 RBMY1EA6NEQ0 496 aaKnown RBP5.5□□□□□ -1.53
PRPF4B-208ENST00000490653 H0Y980 276 aa5.5□□□□□ -1.53
PRPF4B-208ENST00000490653 C3orf84H3BNL1 204 aa5.5□□□□□ -1.53
PRPF4B-208ENST00000490653 M0QYG6 137 aa5.5□□□□□ -1.53
PRPF4B-208ENST00000490653 GGCTO75223 188 aaKnown RBP5.5□□□□□ -1.53
PRPF4B-208ENST00000490653 TNFAIP8O95379 198 aa5.5□□□□□ -1.53
PRPF4B-208ENST00000490653 IGKV1-39P01597 117 aa5.5□□□□□ -1.53
PRPF4B-208ENST00000490653 IGKV1D-39P04432 117 aa5.5□□□□□ -1.53
PRPF4B-208ENST00000490653 RLN1P04808 185 aa5.5□□□□□ -1.53
PRPF4B-208ENST00000490653 CLEC3BP05452 202 aa5.5□□□□□ -1.53
PRPF4B-208ENST00000490653 RBMY1DP0C7P1 496 aaKnown RBP5.5□□□□□ -1.53
PRPF4B-208ENST00000490653 FOLR2P14207 255 aa5.5□□□□□ -1.53
PRPF4B-208ENST00000490653 HRH1P35367 487 aa5.5□□□□□ -1.53
PRPF4B-208ENST00000490653 MAS1LP35410 378 aa5.5□□□□□ -1.53
PRPF4B-208ENST00000490653 G6PCP35575 357 aa5.5□□□□□ -1.53
PRPF4B-208ENST00000490653 KIR2DS2P43631 304 aa5.5□□□□□ -1.53
PRPF4B-208ENST00000490653 CBX5P45973 191 aa5.5□□□□□ -1.53
PRPF4B-208ENST00000490653 MSMO1Q15800 293 aa5.5□□□□□ -1.53
PRPF4B-208ENST00000490653 POU2AF1Q16633 256 aa5.5□□□□□ -1.53
PRPF4B-208ENST00000490653 IZUMO4Q1ZYL8 232 aa5.5□□□□□ -1.53
PRPF4B-208ENST00000490653 KLK9Q2XQG4 91 aa5.5□□□□□ -1.53
PRPF4B-208ENST00000490653 PHLDA2Q53GA4 152 aa5.5□□□□□ -1.53
PRPF4B-208ENST00000490653 TM4SF20Q53R12 229 aa5.5□□□□□ -1.53
PRPF4B-208ENST00000490653 TMEM69Q5SWH9 247 aa5.5□□□□□ -1.53
PRPF4B-208ENST00000490653 AADACL3Q5VUY0 350 aa5.5□□□□□ -1.53
PRPF4B-208ENST00000490653 ZFAND6Q6FIF0 208 aa5.5□□□□□ -1.53
PRPF4B-208ENST00000490653 UNQ9165/PRO28630Q6UXU0 137 aa5.5□□□□□ -1.53
PRPF4B-208ENST00000490653 LINC00322Q6ZN03 302 aaPredicted RBP5.5□□□□□ -1.53
PRPF4B-208ENST00000490653 SLC25A42Q86VD7 318 aa5.5□□□□□ -1.53
PRPF4B-208ENST00000490653 OR5H2Q8NGV7 314 aa5.5□□□□□ -1.53
PRPF4B-208ENST00000490653 VSTM2AQ8TAG5 236 aa5.5□□□□□ -1.53
PRPF4B-208ENST00000490653 ZNF414Q96IQ9 312 aa5.5□□□□□ -1.53
PRPF4B-208ENST00000490653 PLEKHA3Q9HB20 300 aa5.5□□□□□ -1.53
PRPF4B-208ENST00000490653 SIGLEC8Q9NYZ4 499 aa5.5□□□□□ -1.53
PRPF4B-208ENST00000490653 KLK9Q9UKQ9 250 aa5.5□□□□□ -1.53
PRPF4B-208ENST00000490653 IGHV3OR16-8A0A075B7F1 116 aa5.49□□□□□ -1.53
PRPF4B-208ENST00000490653 ZNF320A2RRD8 509 aa5.49□□□□□ -1.53
PRPF4B-208ENST00000490653 TMEM213A2RRL7 107 aa5.49□□□□□ -1.53
PRPF4B-208ENST00000490653 A8MZ25 164 aa5.49□□□□□ -1.53
PRPF4B-208ENST00000490653 RBFOX2O43251 390 aaKnown RBP eCLIP5.49□□□□□ -1.53
PRPF4B-208ENST00000490653 KRASP01116 189 aa5.49□□□□□ -1.53
PRPF4B-208ENST00000490653 TRAPPC2P0DI81 140 aa5.49□□□□□ -1.53
PRPF4B-208ENST00000490653 TRAPPC2BP0DI82 140 aa5.49□□□□□ -1.53
PRPF4B-208ENST00000490653 NQO2P16083 231 aa5.49□□□□□ -1.53
PRPF4B-208ENST00000490653 CBLN1P23435 193 aa5.49□□□□□ -1.53
PRPF4B-208ENST00000490653 F2RP25116 425 aa5.49□□□□□ -1.53
PRPF4B-208ENST00000490653 ARL3P36405 182 aa5.49□□□□□ -1.53
PRPF4B-208ENST00000490653 TAS2R31P59538 309 aa5.49□□□□□ -1.53
PRPF4B-208ENST00000490653 HERV-K104P61576 105 aa5.49□□□□□ -1.53
PRPF4B-208ENST00000490653 WT1-ASQ06250 92 aa5.49□□□□□ -1.53
PRPF4B-208ENST00000490653 GPR107Q5VW38 600 aa5.49□□□□□ -1.53
PRPF4B-208ENST00000490653 SLC25A24Q6NUK1 477 aa5.49□□□□□ -1.53
PRPF4B-208ENST00000490653 GPHB5Q86YW7 130 aa5.49□□□□□ -1.53
PRPF4B-208ENST00000490653 CROCCP3Q8IVE0 287 aa5.49□□□□□ -1.53
PRPF4B-208ENST00000490653 SGPP2Q8IWX5 399 aa5.49□□□□□ -1.53
PRPF4B-208ENST00000490653 Q8N402 240 aa5.49□□□□□ -1.53
PRPF4B-208ENST00000490653 UXS1Q8NBZ7 420 aa5.49□□□□□ -1.53
PRPF4B-208ENST00000490653 DMBX1Q8NFW5 382 aa5.49□□□□□ -1.53
PRPF4B-208ENST00000490653 OR6F1Q8NGZ6 308 aa5.49□□□□□ -1.53
PRPF4B-208ENST00000490653 OR4A5Q8NH83 315 aa5.49□□□□□ -1.53
PRPF4B-208ENST00000490653 MUC7Q8TAX7 377 aa5.49□□□□□ -1.53
PRPF4B-208ENST00000490653 ZNF502Q8TBZ5 544 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms