RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 MAP3K5Q99683 1374 aa1.11□□□□□ -2.23
CD46-216ENST00000490278 A0A1B0GV50 99 aa1.11□□□□□ -2.23
CD46-216ENST00000490278 GGT3PA6NGU5 568 aa1.11□□□□□ -2.23
CD46-216ENST00000490278 TCL1AP56279 114 aa1.11□□□□□ -2.23
CD46-216ENST00000490278 RAB5BP61020 215 aa1.11□□□□□ -2.23
CD46-216ENST00000490278 RPL18Q07020 188 aaKnown RBP1.11□□□□□ -2.23
CD46-216ENST00000490278 NDUFA5Q16718 116 aa1.11□□□□□ -2.23
CD46-216ENST00000490278 CDKL4Q5MAI5 379 aa1.11□□□□□ -2.23
CD46-216ENST00000490278 DCXRQ7Z4W1 244 aa1.11□□□□□ -2.23
CD46-216ENST00000490278 OR5B17Q8NGF7 314 aa1.11□□□□□ -2.23
CD46-216ENST00000490278 OR8B3Q8NGG8 313 aa1.11□□□□□ -2.23
CD46-216ENST00000490278 DDI1Q8WTU0 396 aa1.11□□□□□ -2.23
CD46-216ENST00000490278 OPTNQ96CV9 577 aa1.11□□□□□ -2.23
CD46-216ENST00000490278 XPNPEP1Q9NQW7 623 aa1.11□□□□□ -2.23
CD46-216ENST00000490278 IL36BQ9NZH7 164 aa1.11□□□□□ -2.23
CD46-216ENST00000490278 IBA57-AS1B1ANH7 110 aa1.1□□□□□ -2.23
CD46-216ENST00000490278 DCTN3O75935 186 aa1.1□□□□□ -2.23
CD46-216ENST00000490278 KRT7P08729 469 aa1.1□□□□□ -2.23
CD46-216ENST00000490278 NFYAP23511 347 aaPredicted RBP1.1□□□□□ -2.23
CD46-216ENST00000490278 FXYD2P54710 66 aa1.1□□□□□ -2.23
CD46-216ENST00000490278 MAGOHP61326 146 aaKnown RBP1.1□□□□□ -2.23
CD46-216ENST00000490278 PTH2Q96A98 100 aa1.1□□□□□ -2.23
CD46-216ENST00000490278 ADAT1Q9BUB4 502 aaKnown RBP1.1□□□□□ -2.23
CD46-216ENST00000490278 EFCAB1Q9HAE3 211 aa1.1□□□□□ -2.23
CD46-216ENST00000490278 MED9Q9NWA0 146 aa1.1□□□□□ -2.23
CD46-216ENST00000490278 LSM5Q9Y4Y9 91 aaKnown RBP1.1□□□□□ -2.23
CD46-216ENST00000490278 HELZ2Q9BYK8 2649 aaKnown RBP1.1□□□□□ -2.23
CD46-216ENST00000490278 GREB1Q4ZG55 1949 aa1.09□□□□□ -2.23
CD46-216ENST00000490278 MYH11P35749 1972 aa1.09□□□□□ -2.23
CD46-216ENST00000490278 IGKV3-7A0A075B6H7 116 aa1.09□□□□□ -2.23
CD46-216ENST00000490278 A0A0J9YY10 115 aa1.09□□□□□ -2.23
CD46-216ENST00000490278 A0A1B0GX78 115 aa1.09□□□□□ -2.23
CD46-216ENST00000490278 IRGMA1A4Y4 181 aa1.09□□□□□ -2.23
CD46-216ENST00000490278 INMT-MINDY4F8WBC2 141 aa1.09□□□□□ -2.23
CD46-216ENST00000490278 SDCBPO00560 298 aaPredicted RBP1.09□□□□□ -2.23
CD46-216ENST00000490278 TGOLN2O43493 480 aa1.09□□□□□ -2.23
CD46-216ENST00000490278 CALB1P05937 261 aa1.09□□□□□ -2.23
CD46-216ENST00000490278 KRTAP10-4P60372 401 aaPredicted RBP1.09□□□□□ -2.23
CD46-216ENST00000490278 PMAIP1Q13794 54 aa1.09□□□□□ -2.23
CD46-216ENST00000490278 CDK5R1Q15078 307 aa1.09□□□□□ -2.23
CD46-216ENST00000490278 GRK1Q15835 563 aa1.09□□□□□ -2.23
CD46-216ENST00000490278 GUK1Q16774 197 aa1.09□□□□□ -2.23
CD46-216ENST00000490278 DHFR2Q86XF0 187 aa1.09□□□□□ -2.23
CD46-216ENST00000490278 OR51D1Q8NGF3 324 aa1.09□□□□□ -2.23
CD46-216ENST00000490278 BAIAP2Q9UQB8 552 aa1.09□□□□□ -2.23
CD46-216ENST00000490278 LHFPL6Q9Y693 200 aa1.09□□□□□ -2.23
CD46-216ENST00000490278 KIF24Q5T7B8 1368 aa1.08□□□□□ -2.24
CD46-216ENST00000490278 FBN3Q75N90 2809 aa1.08□□□□□ -2.24
CD46-216ENST00000490278 TRBV20OR9-2A0A075B6H5 130 aa1.08□□□□□ -2.24
CD46-216ENST00000490278 IGKV1D-43A0A0B4J1Z2 117 aa1.08□□□□□ -2.24
CD46-216ENST00000490278 FABP5P3A8MUU1 101 aa1.08□□□□□ -2.24
CD46-216ENST00000490278 PRM2P04554 102 aa1.08□□□□□ -2.24
CD46-216ENST00000490278 METTL15P1P0C7V9 234 aa1.08□□□□□ -2.24
CD46-216ENST00000490278 IL9P15248 144 aa1.08□□□□□ -2.24
CD46-216ENST00000490278 G6PCP35575 357 aa1.08□□□□□ -2.24
CD46-216ENST00000490278 EIF2B2P49770 351 aaKnown RBP1.08□□□□□ -2.24
CD46-216ENST00000490278 CCL20P78556 96 aa1.08□□□□□ -2.24
CD46-216ENST00000490278 IBA57Q5T440 356 aaKnown RBP1.08□□□□□ -2.24
CD46-216ENST00000490278 SYPL2Q5VXT5 272 aa1.08□□□□□ -2.24
CD46-216ENST00000490278 LPCAT4Q643R3 524 aa1.08□□□□□ -2.24
CD46-216ENST00000490278 MRPS26Q9BYN8 205 aaKnown RBP1.08□□□□□ -2.24
CD46-216ENST00000490278 CISHQ9NSE2 258 aa1.08□□□□□ -2.24
CD46-216ENST00000490278 FLG2Q5D862 2391 aaPredicted RBP1.08□□□□□ -2.24
CD46-216ENST00000490278 FREM1Q5H8C1 2179 aa1.08□□□□□ -2.24
CD46-216ENST00000490278 TONSLQ96HA7 1378 aa1.08□□□□□ -2.24
CD46-216ENST00000490278 PMP2P02689 132 aa1.07□□□□□ -2.24
CD46-216ENST00000490278 OR5G3P0C626 314 aa1.07□□□□□ -2.24
CD46-216ENST00000490278 UBBP0CG47 229 aa1.07□□□□□ -2.24
CD46-216ENST00000490278 RPS4Y1P22090 263 aaKnown RBP1.07□□□□□ -2.24
CD46-216ENST00000490278 ZNF80P51504 273 aaPredicted RBP1.07□□□□□ -2.24
CD46-216ENST00000490278 SUPT4H1P63272 117 aaKnown RBP1.07□□□□□ -2.24
CD46-216ENST00000490278 ZNF345Q14585 488 aa1.07□□□□□ -2.24
CD46-216ENST00000490278 Q8N2B8 174 aa1.07□□□□□ -2.24
CD46-216ENST00000490278 OR2T4Q8NH00 348 aa1.07□□□□□ -2.24
CD46-216ENST00000490278 C11orf40Q8WZ69 217 aa1.07□□□□□ -2.24
CD46-216ENST00000490278 WDR61Q9GZS3 305 aaKnown RBP1.07□□□□□ -2.24
CD46-216ENST00000490278 GLI3P10071 1580 aa1.07□□□□□ -2.24
CD46-216ENST00000490278 BAZ2BQ9UIF8 2168 aaKnown RBP1.06□□□□□ -2.24
CD46-216ENST00000490278 EEF1E1-BLOC1S5C9J1V9 151 aa1.06□□□□□ -2.24
CD46-216ENST00000490278 IFITM2Q01629 132 aa1.06□□□□□ -2.24
CD46-216ENST00000490278 SURF2Q15527 256 aaPredicted RBP1.06□□□□□ -2.24
CD46-216ENST00000490278 HIST3H3Q16695 136 aa1.06□□□□□ -2.24
CD46-216ENST00000490278 HIST2H3PS2Q5TEC6 136 aa1.06□□□□□ -2.24
CD46-216ENST00000490278 ALKAL1Q6UXT8 129 aa1.06□□□□□ -2.24
CD46-216ENST00000490278 Q6ZS49 121 aa1.06□□□□□ -2.24
CD46-216ENST00000490278 OTUD6BQ8N6M0 293 aa1.06□□□□□ -2.24
CD46-216ENST00000490278 ZNF439Q8NDP4 499 aa1.06□□□□□ -2.24
CD46-216ENST00000490278 SLC35B4Q969S0 331 aa1.06□□□□□ -2.24
CD46-216ENST00000490278 YIPF3Q9GZM5 350 aa1.06□□□□□ -2.24
CD46-216ENST00000490278 SETD5Q9C0A6 1442 aa1.06□□□□□ -2.24
CD46-216ENST00000490278 PCDH15Q96QU1 1955 aa1.05□□□□□ -2.24
CD46-216ENST00000490278 KCNK1O00180 336 aa1.05□□□□□ -2.24
CD46-216ENST00000490278 IFNA5P01569 189 aa1.05□□□□□ -2.24
CD46-216ENST00000490278 TNNC2P02585 160 aa1.05□□□□□ -2.24
CD46-216ENST00000490278 HIST1H1EP10412 219 aaKnown RBP1.05□□□□□ -2.24
CD46-216ENST00000490278 AADACL3Q5VUY0 350 aa1.05□□□□□ -2.24
CD46-216ENST00000490278 C1orf158Q8N1D5 194 aa1.05□□□□□ -2.24
CD46-216ENST00000490278 C15orf53Q8NAA6 179 aa1.05□□□□□ -2.24
CD46-216ENST00000490278 RASSF5Q8WWW0 418 aa1.05□□□□□ -2.24
CD46-216ENST00000490278 KLK6Q92876 244 aa1.05□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms