RNA–Protein interactions for RNA: ENST00000490077.5

TNXB-206, Transcript of tenascin XB, humanhuman

TSL 1 (best)

Gene TNXB, Length 2,756 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-206ENST00000490077 RNF212BA8MTL3 300 aa10.86□□□□□ -0.67
TNXB-206ENST00000490077 B4DEV8 164 aa10.86□□□□□ -0.67
TNXB-206ENST00000490077 EREGO14944 169 aa10.86□□□□□ -0.67
TNXB-206ENST00000490077 KITLGP21583 273 aa10.86□□□□□ -0.67
TNXB-206ENST00000490077 DOLPP1Q86YN1 238 aa10.86□□□□□ -0.67
TNXB-206ENST00000490077 TMEM183AQ8IXX5 376 aa10.86□□□□□ -0.67
TNXB-206ENST00000490077 HSD17B10Q99714 261 aaKnown RBP10.86□□□□□ -0.67
TNXB-206ENST00000490077 LRFN3Q9BTN0 628 aa10.86□□□□□ -0.67
TNXB-206ENST00000490077 TMEM210A6NLX4 147 aa10.86□□□□□ -0.67
TNXB-206ENST00000490077 FAM90A26D6RGX4 464 aa10.86□□□□□ -0.67
TNXB-206ENST00000490077 IL6RP08887 468 aaPredicted RBP10.86□□□□□ -0.67
TNXB-206ENST00000490077 DDTP30046 118 aa10.86□□□□□ -0.67
TNXB-206ENST00000490077 ADMP35318 185 aa10.86□□□□□ -0.67
TNXB-206ENST00000490077 VWC2Q2TAL6 325 aa10.86□□□□□ -0.67
TNXB-206ENST00000490077 STPG3Q8N7X2 389 aa10.86□□□□□ -0.67
TNXB-206ENST00000490077 OR2T6Q8NHC8 308 aa10.86□□□□□ -0.67
TNXB-206ENST00000490077 RNASE7Q9H1E1 156 aaKnown RBP10.86□□□□□ -0.67
TNXB-206ENST00000490077 MRPL36Q9P0J6 103 aaKnown RBP10.86□□□□□ -0.67
TNXB-206ENST00000490077 H3BTX0 84 aa10.85□□□□□ -0.67
TNXB-206ENST00000490077 REG1AP05451 166 aa10.85□□□□□ -0.67
TNXB-206ENST00000490077 RPL31P62899 125 aaKnown RBP10.85□□□□□ -0.67
TNXB-206ENST00000490077 EFNB3Q15768 340 aa10.85□□□□□ -0.67
TNXB-206ENST00000490077 NEUROG1Q92886 237 aa10.85□□□□□ -0.67
TNXB-206ENST00000490077 ZNF503Q96F45 646 aa10.85□□□□□ -0.67
TNXB-206ENST00000490077 LURAP1Q96LR2 239 aa10.85□□□□□ -0.67
TNXB-206ENST00000490077 ASCL2Q99929 193 aa10.85□□□□□ -0.67
TNXB-206ENST00000490077 GCM1Q9NP62 436 aa10.85□□□□□ -0.67
TNXB-206ENST00000490077 PLSCR4Q9NRQ2 329 aa10.85□□□□□ -0.67
TNXB-206ENST00000490077 TMEM242Q9NWH2 141 aa10.85□□□□□ -0.67
TNXB-206ENST00000490077 SPG11Q96JI7 2443 aa10.85□□□□□ -0.67
TNXB-206ENST00000490077 IGHV3-72A0A0B4J1Y9 119 aa10.85□□□□□ -0.67
TNXB-206ENST00000490077 PRR33A8MZF0 331 aa10.85□□□□□ -0.67
TNXB-206ENST00000490077 RPL15P61313 204 aaKnown RBP10.85□□□□□ -0.67
TNXB-206ENST00000490077 DDB2Q92466 427 aa10.85□□□□□ -0.67
TNXB-206ENST00000490077 UHRF2Q96PU4 802 aa10.85□□□□□ -0.67
TNXB-206ENST00000490077 IDI2-AS1Q9NZ38 188 aa10.85□□□□□ -0.67
TNXB-206ENST00000490077 PROCRQ9UNN8 238 aa10.85□□□□□ -0.67
TNXB-206ENST00000490077 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.84□□□□□ -0.67
TNXB-206ENST00000490077 IFNA1P01562 189 aa10.84□□□□□ -0.67
TNXB-206ENST00000490077 PDLIM3Q53GG5 364 aaPredicted RBP10.84□□□□□ -0.67
TNXB-206ENST00000490077 KRTCAP3Q53RY4 240 aa10.84□□□□□ -0.67
TNXB-206ENST00000490077 ACTL10Q5JWF8 245 aa10.84□□□□□ -0.67
TNXB-206ENST00000490077 ZNF600Q6ZNG1 722 aa10.84□□□□□ -0.67
TNXB-206ENST00000490077 FAM168AQ92567 244 aa10.84□□□□□ -0.67
TNXB-206ENST00000490077 OR5B12Q96R08 314 aa10.84□□□□□ -0.67
TNXB-206ENST00000490077 S1PR3Q99500 378 aa10.84□□□□□ -0.67
TNXB-206ENST00000490077 PITPNC1Q9UKF7 332 aa10.84□□□□□ -0.67
TNXB-206ENST00000490077 TCF15Q12870 199 aa10.84□□□□□ -0.67
TNXB-206ENST00000490077 TPSG1Q9NRR2 321 aa10.84□□□□□ -0.67
TNXB-206ENST00000490077 RYDENQ9NUL5 291 aaKnown RBP10.84□□□□□ -0.67
TNXB-206ENST00000490077 TIMM9Q9Y5J7 89 aa10.84□□□□□ -0.67
TNXB-206ENST00000490077 TMEM250H0YL14 139 aa10.83□□□□□ -0.68
TNXB-206ENST00000490077 CGB3P0DN86 165 aa10.83□□□□□ -0.68
TNXB-206ENST00000490077 CGB7P0DN87 165 aa10.83□□□□□ -0.68
TNXB-206ENST00000490077 CD24P25063 80 aa10.83□□□□□ -0.68
TNXB-206ENST00000490077 CRYBB3P26998 211 aa10.83□□□□□ -0.68
TNXB-206ENST00000490077 CDKN1AP38936 164 aa10.83□□□□□ -0.68
TNXB-206ENST00000490077 SPCS3P61009 180 aa10.83□□□□□ -0.68
TNXB-206ENST00000490077 CYB5R2Q6BCY4 276 aa10.83□□□□□ -0.68
TNXB-206ENST00000490077 PRR7Q8TB68 274 aa10.83□□□□□ -0.68
TNXB-206ENST00000490077 CBLN4Q9NTU7 201 aa10.83□□□□□ -0.68
TNXB-206ENST00000490077 TMPRSS2O15393 492 aa10.83□□□□□ -0.68
TNXB-206ENST00000490077 HPRT1P00492 218 aa10.83□□□□□ -0.68
TNXB-206ENST00000490077 CT45A6P0DMU7 189 aa10.83□□□□□ -0.68
TNXB-206ENST00000490077 CT45A5P0DMU8 189 aa10.83□□□□□ -0.68
TNXB-206ENST00000490077 CT45A7P0DMV0 189 aa10.83□□□□□ -0.68
TNXB-206ENST00000490077 ACOT6Q3I5F7 207 aaPredicted RBP10.83□□□□□ -0.68
TNXB-206ENST00000490077 LYPD2Q6UXB3 125 aa10.83□□□□□ -0.68
TNXB-206ENST00000490077 TRAPPC1Q9Y5R8 145 aa10.83□□□□□ -0.68
TNXB-206ENST00000490077 LINC00869P0C866 280 aa10.82□□□□□ -0.68
TNXB-206ENST00000490077 CCKARP32238 428 aa10.82□□□□□ -0.68
TNXB-206ENST00000490077 MRPL41Q8IXM3 137 aaKnown RBP10.82□□□□□ -0.68
TNXB-206ENST00000490077 SFRP2Q96HF1 295 aa10.82□□□□□ -0.68
TNXB-206ENST00000490077 SSBP3Q9BWW4 388 aaPredicted RBP10.82□□□□□ -0.68
TNXB-206ENST00000490077 ITPR1Q14643 2758 aa10.82□□□□□ -0.68
TNXB-206ENST00000490077 TRAV34A0A0B4J273 112 aa10.82□□□□□ -0.68
TNXB-206ENST00000490077 GGCTO75223 188 aaKnown RBP10.82□□□□□ -0.68
TNXB-206ENST00000490077 IGHV1-46P01743 117 aa10.82□□□□□ -0.68
TNXB-206ENST00000490077 CHRNB4P30926 498 aa10.82□□□□□ -0.68
TNXB-206ENST00000490077 MRPS11P82912 194 aaKnown RBP10.82□□□□□ -0.68
TNXB-206ENST00000490077 JOSD1Q15040 202 aaPredicted RBP10.82□□□□□ -0.68
TNXB-206ENST00000490077 GSX1Q9H4S2 264 aaPredicted RBP10.82□□□□□ -0.68
TNXB-206ENST00000490077 MANBALQ9NQG1 85 aa10.82□□□□□ -0.68
TNXB-206ENST00000490077 ELOVL5Q9NYP7 299 aa10.82□□□□□ -0.68
TNXB-206ENST00000490077 LSM4Q9Y4Z0 139 aaKnown RBP10.82□□□□□ -0.68
TNXB-206ENST00000490077 PPIAL4AQ9Y536 164 aa10.82□□□□□ -0.68
TNXB-206ENST00000490077 LYNX1G3V0Z9 82 aa10.82□□□□□ -0.68
TNXB-206ENST00000490077 STAG3L2P0CL84 134 aa10.82□□□□□ -0.68
TNXB-206ENST00000490077 STAG3L3P0CL85 134 aa10.82□□□□□ -0.68
TNXB-206ENST00000490077 LYNX1P0DP58 116 aa10.82□□□□□ -0.68
TNXB-206ENST00000490077 GCHFRP30047 84 aa10.82□□□□□ -0.68
TNXB-206ENST00000490077 PRR30Q53SZ7 412 aaPredicted RBP10.82□□□□□ -0.68
TNXB-206ENST00000490077 MBNL2Q5VZF2 373 aaKnown RBP10.82□□□□□ -0.68
TNXB-206ENST00000490077 KIR3DL3Q8N743 410 aa10.82□□□□□ -0.68
TNXB-206ENST00000490077 PRSS33Q8NF86 280 aa10.82□□□□□ -0.68
TNXB-206ENST00000490077 GAFA1Q96PS6 74 aa10.82□□□□□ -0.68
TNXB-206ENST00000490077 PARD6GQ9BYG4 376 aaPredicted RBP10.82□□□□□ -0.68
TNXB-206ENST00000490077 CTDSP1Q9GZU7 261 aa10.82□□□□□ -0.68
TNXB-206ENST00000490077 MGST3O14880 152 aa10.81□□□□□ -0.68
TNXB-206ENST00000490077 LHBP01229 141 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms