RNA–Protein interactions for RNA: ENST00000489535.2

SMC6-209, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 550 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-209ENST00000489535 DTD1Q8TEA8 209 aa6.21□□□□□ -1.42
SMC6-209ENST00000489535 BSCL2Q96G97 398 aaPredicted RBP6.21□□□□□ -1.42
SMC6-209ENST00000489535 SMIM8Q96KF7 97 aa6.21□□□□□ -1.42
SMC6-209ENST00000489535 SMIM3Q9BZL3 60 aa6.21□□□□□ -1.42
SMC6-209ENST00000489535 SLC25A31Q9H0C2 315 aa6.21□□□□□ -1.42
SMC6-209ENST00000489535 FBXL17Q9UF56 701 aa6.21□□□□□ -1.42
SMC6-209ENST00000489535 NUP50Q9UKX7 468 aa6.21□□□□□ -1.42
SMC6-209ENST00000489535 TBL2Q9Y4P3 447 aaKnown RBP6.21□□□□□ -1.42
SMC6-209ENST00000489535 MINOS1-NBL1R4GNA1 71 aa6.21□□□□□ -1.42
SMC6-209ENST00000489535 U3KQ87 197 aa6.21□□□□□ -1.42
SMC6-209ENST00000489535 SPG11Q96JI7 2443 aa6.2□□□□□ -1.42
SMC6-209ENST00000489535 ASH1LQ9NR48 2969 aaKnown RBP6.2□□□□□ -1.42
SMC6-209ENST00000489535 CSMD2Q7Z408 3487 aa6.2□□□□□ -1.42
SMC6-209ENST00000489535 TRAV40A0A0B4J280 105 aa6.2□□□□□ -1.42
SMC6-209ENST00000489535 B4DSR2 109 aa6.2□□□□□ -1.42
SMC6-209ENST00000489535 TAAR5O14804 337 aa6.2□□□□□ -1.42
SMC6-209ENST00000489535 TIMM23O14925 209 aa6.2□□□□□ -1.42
SMC6-209ENST00000489535 CFDP00746 253 aaPredicted RBP6.2□□□□□ -1.42
SMC6-209ENST00000489535 IFNA7P01567 189 aa6.2□□□□□ -1.42
SMC6-209ENST00000489535 IGLV2-23P01705 113 aa6.2□□□□□ -1.42
SMC6-209ENST00000489535 IL6RP08887 468 aaPredicted RBP6.2□□□□□ -1.42
SMC6-209ENST00000489535 MYOD1P15172 320 aa6.2□□□□□ -1.42
SMC6-209ENST00000489535 PAX6P26367 422 aa6.2□□□□□ -1.42
SMC6-209ENST00000489535 CNTFRP26992 372 aa6.2□□□□□ -1.42
SMC6-209ENST00000489535 CD1BP29016 333 aa6.2□□□□□ -1.42
SMC6-209ENST00000489535 TAS2R30P59541 319 aa6.2□□□□□ -1.42
SMC6-209ENST00000489535 SPCS3P61009 180 aa6.2□□□□□ -1.42
SMC6-209ENST00000489535 LOXL1Q08397 574 aaPredicted RBP6.2□□□□□ -1.42
SMC6-209ENST00000489535 EXOSC2Q13868 293 aaKnown RBP6.2□□□□□ -1.42
SMC6-209ENST00000489535 SSX2Q16385 188 aa6.2□□□□□ -1.42
SMC6-209ENST00000489535 VMA21Q3ZAQ7 101 aa6.2□□□□□ -1.42
SMC6-209ENST00000489535 AARDQ4LEZ3 155 aa6.2□□□□□ -1.42
SMC6-209ENST00000489535 SPANXN5Q5MJ07 72 aa6.2□□□□□ -1.42
SMC6-209ENST00000489535 ZNF429Q86V71 674 aa6.2□□□□□ -1.42
SMC6-209ENST00000489535 DYNAPQ8N1N2 210 aa6.2□□□□□ -1.42
SMC6-209ENST00000489535 TMEM252Q8N6L7 170 aa6.2□□□□□ -1.42
SMC6-209ENST00000489535 OR52E5Q8NH55 327 aa6.2□□□□□ -1.42
SMC6-209ENST00000489535 OR4A5Q8NH83 315 aa6.2□□□□□ -1.42
SMC6-209ENST00000489535 VSTM2AQ8TAG5 236 aa6.2□□□□□ -1.42
SMC6-209ENST00000489535 TMEM167AQ8TBQ9 72 aa6.2□□□□□ -1.42
SMC6-209ENST00000489535 ST8SIA2Q92186 375 aa6.2□□□□□ -1.42
SMC6-209ENST00000489535 Q96MF0 132 aa6.2□□□□□ -1.42
SMC6-209ENST00000489535 CLCC1Q96S66 551 aa6.2□□□□□ -1.42
SMC6-209ENST00000489535 PRNDQ9UKY0 176 aa6.2□□□□□ -1.42
SMC6-209ENST00000489535 PAIP2BQ9ULR5 123 aaKnown RBP6.2□□□□□ -1.42
SMC6-209ENST00000489535 TCF19Q9Y242 345 aa6.2□□□□□ -1.42
SMC6-209ENST00000489535 FOXA2Q9Y261 457 aaPredicted RBP6.2□□□□□ -1.42
SMC6-209ENST00000489535 OR51B2Q9Y5P1 312 aa6.2□□□□□ -1.42
SMC6-209ENST00000489535 AUP1Q9Y679 476 aa6.2□□□□□ -1.42
SMC6-209ENST00000489535 WSB1Q9Y6I7 421 aa6.2□□□□□ -1.42
SMC6-209ENST00000489535 APCP25054 2843 aa6.19□□□□□ -1.42
SMC6-209ENST00000489535 IGHV3OR16-10A0A075B7F0 116 aa6.19□□□□□ -1.42
SMC6-209ENST00000489535 TRAV20A0A0B4J274 112 aa6.19□□□□□ -1.42
SMC6-209ENST00000489535 CENPVL3A0A0U1RRI6 287 aa6.19□□□□□ -1.42
SMC6-209ENST00000489535 OOSP1A8MZH6 123 aa6.19□□□□□ -1.42
SMC6-209ENST00000489535 SMAD7O15105 426 aaKnown RBP6.19□□□□□ -1.42
SMC6-209ENST00000489535 NPFFO15130 113 aa6.19□□□□□ -1.42
SMC6-209ENST00000489535 SLC25A17O43808 307 aa6.19□□□□□ -1.42
SMC6-209ENST00000489535 CST7O76096 145 aa6.19□□□□□ -1.42
SMC6-209ENST00000489535 VENTXO95231 258 aa6.19□□□□□ -1.42
SMC6-209ENST00000489535 IGKV1D-33P01593 117 aa6.19□□□□□ -1.42
SMC6-209ENST00000489535 IGKV1-33P01594 117 aa6.19□□□□□ -1.42
SMC6-209ENST00000489535 FGF2P09038 288 aa6.19□□□□□ -1.42
SMC6-209ENST00000489535 TPT1P13693 172 aaKnown RBP6.19□□□□□ -1.42
SMC6-209ENST00000489535 SAA4P35542 130 aa6.19□□□□□ -1.42
SMC6-209ENST00000489535 LGALS7P47929 136 aa6.19□□□□□ -1.42
SMC6-209ENST00000489535 HOXA1P49639 335 aaPredicted RBP6.19□□□□□ -1.42
SMC6-209ENST00000489535 SULT1A1P50225 295 aa6.19□□□□□ -1.42
SMC6-209ENST00000489535 DYNLT3P51808 116 aa6.19□□□□□ -1.42
SMC6-209ENST00000489535 HSPE1P61604 102 aaKnown RBP6.19□□□□□ -1.42
SMC6-209ENST00000489535 BAXQ07812 192 aa6.19□□□□□ -1.42
SMC6-209ENST00000489535 RUSC1-AS1Q66K80 236 aa6.19□□□□□ -1.42
SMC6-209ENST00000489535 RPL7L1Q6DKI1 246 aaKnown RBP6.19□□□□□ -1.42
SMC6-209ENST00000489535 CCDC144NLQ6NUI1 221 aa6.19□□□□□ -1.42
SMC6-209ENST00000489535 PRSS57Q6UWY2 283 aa6.19□□□□□ -1.42
SMC6-209ENST00000489535 ALKAL2Q6UX46 152 aa6.19□□□□□ -1.42
SMC6-209ENST00000489535 STX12Q86Y82 276 aa6.19□□□□□ -1.42
SMC6-209ENST00000489535 MAPK1IP1LQ8NDC0 245 aa6.19□□□□□ -1.42
SMC6-209ENST00000489535 ZNF680Q8NEM1 530 aa6.19□□□□□ -1.42
SMC6-209ENST00000489535 C17orf50Q8WW18 174 aa6.19□□□□□ -1.42
SMC6-209ENST00000489535 MALSU1Q96EH3 234 aa6.19□□□□□ -1.42
SMC6-209ENST00000489535 RITA1Q96K30 269 aa6.19□□□□□ -1.42
SMC6-209ENST00000489535 CIB3Q96Q77 187 aaPredicted RBP6.19□□□□□ -1.42
SMC6-209ENST00000489535 TSNAXQ99598 290 aaKnown RBP6.19□□□□□ -1.42
SMC6-209ENST00000489535 HINT2Q9BX68 163 aa6.19□□□□□ -1.42
SMC6-209ENST00000489535 REG4Q9BYZ8 158 aa6.19□□□□□ -1.42
SMC6-209ENST00000489535 HIPK2Q9H2X6 1198 aa6.19□□□□□ -1.42
SMC6-209ENST00000489535 ENY2Q9NPA8 101 aa6.19□□□□□ -1.42
SMC6-209ENST00000489535 HEYLQ9NQ87 328 aaPredicted RBP6.19□□□□□ -1.42
SMC6-209ENST00000489535 CYTL1Q9NRR1 136 aa6.19□□□□□ -1.42
SMC6-209ENST00000489535 TMEM14BQ9NUH8 114 aa6.19□□□□□ -1.42
SMC6-209ENST00000489535 HIF1ANQ9NWT6 349 aa6.19□□□□□ -1.42
SMC6-209ENST00000489535 FKBP11Q9NYL4 201 aa6.19□□□□□ -1.42
SMC6-209ENST00000489535 CACFD1Q9UGQ2 172 aa6.19□□□□□ -1.42
SMC6-209ENST00000489535 UBQLN2Q9UHD9 624 aa6.19□□□□□ -1.42
SMC6-209ENST00000489535 AKAP9Q99996 3911 aa6.18□□□□□ -1.42
SMC6-209ENST00000489535 BORCS7-ASMTA0A0B4J1R7 106 aa6.18□□□□□ -1.42
SMC6-209ENST00000489535 IGHV1-69DA0A0B4J2H0 117 aa6.18□□□□□ -1.42
SMC6-209ENST00000489535 TEX50A0A1B0GTY4 177 aa6.18□□□□□ -1.42
SMC6-209ENST00000489535 JTBO76095 146 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms