RNA–Protein interactions for RNA: ENST00000489212.2

LIME1-207, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 5

Gene LIME1, Length 559 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-207ENST00000489212 WT1-ASQ06250 92 aa16.11■□□□□ 0.17
LIME1-207ENST00000489212 OR1L8Q8NGR8 309 aa16.11■□□□□ 0.17
LIME1-207ENST00000489212 SMIM4Q8WVI0 70 aa16.11■□□□□ 0.17
LIME1-207ENST00000489212 SEC22AQ96IW7 307 aa16.11■□□□□ 0.17
LIME1-207ENST00000489212 C6orf62Q9GZU0 229 aaPredicted RBP16.11■□□□□ 0.17
LIME1-207ENST00000489212 OR51B2Q9Y5P1 312 aa16.11■□□□□ 0.17
LIME1-207ENST00000489212 CEPT1Q9Y6K0 416 aa16.11■□□□□ 0.17
LIME1-207ENST00000489212 MFSD2BA6NFX1 497 aa16.1■□□□□ 0.17
LIME1-207ENST00000489212 NOL3O60936 208 aaKnown RBP16.1■□□□□ 0.17
LIME1-207ENST00000489212 RAB3DO95716 219 aa16.1■□□□□ 0.17
LIME1-207ENST00000489212 PPP5CP53041 499 aa16.1■□□□□ 0.17
LIME1-207ENST00000489212 MRPS10P82664 201 aaKnown RBP16.1■□□□□ 0.17
LIME1-207ENST00000489212 SSBP1Q04837 148 aaKnown RBP16.1■□□□□ 0.17
LIME1-207ENST00000489212 TATDN3Q17R31 274 aa16.1■□□□□ 0.17
LIME1-207ENST00000489212 FAAP20Q6NZ36 180 aa16.1■□□□□ 0.17
LIME1-207ENST00000489212 STEAP1BQ6NZ63 245 aa16.1■□□□□ 0.17
LIME1-207ENST00000489212 CLEC19AQ6UXS0 136 aa16.1■□□□□ 0.17
LIME1-207ENST00000489212 MRGPRFQ96AM1 343 aa16.1■□□□□ 0.17
LIME1-207ENST00000489212 ZNF486Q96H40 463 aaPredicted RBP16.1■□□□□ 0.17
LIME1-207ENST00000489212 SMAD5-AS1Q9Y6J3 95 aa16.1■□□□□ 0.17
LIME1-207ENST00000489212 SNAPC5O75971 98 aa16.09■□□□□ 0.17
LIME1-207ENST00000489212 OR2C1O95371 312 aa16.09■□□□□ 0.17
LIME1-207ENST00000489212 OR13C7P0DN81 318 aa16.09■□□□□ 0.17
LIME1-207ENST00000489212 PIGPP57054 158 aa16.09■□□□□ 0.17
LIME1-207ENST00000489212 IL18Q14116 193 aa16.09■□□□□ 0.17
LIME1-207ENST00000489212 FAM209BQ5JX69 171 aa16.09■□□□□ 0.17
LIME1-207ENST00000489212 THOC7Q6I9Y2 204 aaKnown RBP16.09■□□□□ 0.17
LIME1-207ENST00000489212 ADAMTSL5Q6ZMM2 481 aa16.09■□□□□ 0.17
LIME1-207ENST00000489212 TERB2Q8NHR7 220 aa16.09■□□□□ 0.17
LIME1-207ENST00000489212 EEF1AKMT3Q96AZ1 226 aa16.09■□□□□ 0.17
LIME1-207ENST00000489212 HINT2Q9BX68 163 aa16.09■□□□□ 0.17
LIME1-207ENST00000489212 TMEM14BQ9NUH8 114 aa16.09■□□□□ 0.17
LIME1-207ENST00000489212 SIGLEC8Q9NYZ4 499 aa16.09■□□□□ 0.17
LIME1-207ENST00000489212 PRNDQ9UKY0 176 aa16.09■□□□□ 0.17
LIME1-207ENST00000489212 CTDSPLO15194 276 aa16.08■□□□□ 0.16
LIME1-207ENST00000489212 GGCTO75223 188 aaKnown RBP16.08■□□□□ 0.16
LIME1-207ENST00000489212 SCGB2B2Q4G0G5 96 aa16.08■□□□□ 0.16
LIME1-207ENST00000489212 GDPD1Q8N9F7 314 aa16.08■□□□□ 0.16
LIME1-207ENST00000489212 TP53RKQ96S44 253 aa16.08■□□□□ 0.16
LIME1-207ENST00000489212 ASCL2Q99929 193 aa16.08■□□□□ 0.16
LIME1-207ENST00000489212 NXF2Q9GZY0 626 aaKnown RBP16.08■□□□□ 0.16
LIME1-207ENST00000489212 C15orf61A6NNL5 157 aa16.07■□□□□ 0.16
LIME1-207ENST00000489212 SERPINE2P07093 398 aa16.07■□□□□ 0.16
LIME1-207ENST00000489212 EDN2P20800 178 aa16.07■□□□□ 0.16
LIME1-207ENST00000489212 ARL3P36405 182 aa16.07■□□□□ 0.16
LIME1-207ENST00000489212 MECP2P51608 486 aaKnown RBP16.07■□□□□ 0.16
LIME1-207ENST00000489212 MFAP2P55001 183 aa16.07■□□□□ 0.16
LIME1-207ENST00000489212 HSD17B13Q7Z5P4 300 aaPredicted RBP16.07■□□□□ 0.16
LIME1-207ENST00000489212 OR13C8Q8NGS7 320 aa16.07■□□□□ 0.16
LIME1-207ENST00000489212 MARCH1Q8TCQ1 289 aa16.07■□□□□ 0.16
LIME1-207ENST00000489212 LSM10Q969L4 123 aaKnown RBP16.07■□□□□ 0.16
LIME1-207ENST00000489212 TSC22D3Q99576 134 aa16.07■□□□□ 0.16
LIME1-207ENST00000489212 SOSTQ9BQB4 213 aa16.07■□□□□ 0.16
LIME1-207ENST00000489212 PEMTQ9UBM1 199 aa16.07■□□□□ 0.16
LIME1-207ENST00000489212 STAB2Q8WWQ8 2551 aa16.06■□□□□ 0.16
LIME1-207ENST00000489212 H0Y980 276 aa16.06■□□□□ 0.16
LIME1-207ENST00000489212 TNFSF8P32971 234 aa16.06■□□□□ 0.16
LIME1-207ENST00000489212 H2BFWTQ7Z2G1 175 aa16.06■□□□□ 0.16
LIME1-207ENST00000489212 Q8N1Y9 231 aa16.06■□□□□ 0.16
LIME1-207ENST00000489212 OR5B3Q8NH48 314 aa16.06■□□□□ 0.16
LIME1-207ENST00000489212 ZNF502Q8TBZ5 544 aa16.06■□□□□ 0.16
LIME1-207ENST00000489212 CXorf58Q96LI9 332 aa16.06■□□□□ 0.16
LIME1-207ENST00000489212 RABL2AQ9UBK7 228 aaPredicted RBP16.06■□□□□ 0.16
LIME1-207ENST00000489212 RABL2BQ9UNT1 228 aa16.06■□□□□ 0.16
LIME1-207ENST00000489212 TRBV7-1A0A0A6YYK4 115 aa16.05■□□□□ 0.16
LIME1-207ENST00000489212 IZUMO1RA6ND01 250 aa16.05■□□□□ 0.16
LIME1-207ENST00000489212 CLEC3BP05452 202 aa16.05■□□□□ 0.16
LIME1-207ENST00000489212 MEF2DQ14814 521 aa16.05■□□□□ 0.16
LIME1-207ENST00000489212 IZUMO4Q1ZYL8 232 aa16.05■□□□□ 0.16
LIME1-207ENST00000489212 GPHB5Q86YW7 130 aa16.05■□□□□ 0.16
LIME1-207ENST00000489212 OR4C16Q8NGL9 310 aa16.05■□□□□ 0.16
LIME1-207ENST00000489212 MCFD2Q8NI22 146 aa16.05■□□□□ 0.16
LIME1-207ENST00000489212 ZFAND1Q8TCF1 268 aa16.05■□□□□ 0.16
LIME1-207ENST00000489212 ZC4H2Q9NQZ6 224 aa16.05■□□□□ 0.16
LIME1-207ENST00000489212 FKBP11Q9NYL4 201 aa16.05■□□□□ 0.16
LIME1-207ENST00000489212 F11RQ9Y624 299 aaKnown RBP16.05■□□□□ 0.16
LIME1-207ENST00000489212 C3orf85A0A1B0GTC6 90 aa16.04■□□□□ 0.16
LIME1-207ENST00000489212 GSTZ1O43708 216 aaPredicted RBP16.04■□□□□ 0.16
LIME1-207ENST00000489212 IGKV1-5P01602 117 aa16.04■□□□□ 0.16
LIME1-207ENST00000489212 CTSDP07339 412 aaPredicted RBP16.04■□□□□ 0.16
LIME1-207ENST00000489212 P0C879 139 aa16.04■□□□□ 0.16
LIME1-207ENST00000489212 NHLRC4P0CG21 123 aaPredicted RBP16.04■□□□□ 0.16
LIME1-207ENST00000489212 SP6Q3SY56 376 aa16.04■□□□□ 0.16
LIME1-207ENST00000489212 SLC25A24Q6NUK1 477 aa16.04■□□□□ 0.16
LIME1-207ENST00000489212 OR4A16Q8NH70 328 aa16.04■□□□□ 0.16
LIME1-207ENST00000489212 THAP7Q9BT49 309 aaPredicted RBP16.04■□□□□ 0.16
LIME1-207ENST00000489212 THYN1Q9P016 225 aa16.04■□□□□ 0.16
LIME1-207ENST00000489212 COPZ2Q9P299 210 aa16.04■□□□□ 0.16
LIME1-207ENST00000489212 TENM3Q9P273 2699 aa16.03■□□□□ 0.16
LIME1-207ENST00000489212 C2orf70A6NJV1 201 aa16.03■□□□□ 0.16
LIME1-207ENST00000489212 LGALS9O00182 355 aa16.03■□□□□ 0.16
LIME1-207ENST00000489212 AKAIN1P0CW23 69 aa16.03■□□□□ 0.16
LIME1-207ENST00000489212 GPR183P32249 361 aa16.03■□□□□ 0.16
LIME1-207ENST00000489212 TMEM56Q96MV1 263 aa16.03■□□□□ 0.16
LIME1-207ENST00000489212 RTBDNQ9BSG5 229 aaPredicted RBP16.03■□□□□ 0.16
LIME1-207ENST00000489212 RBM38Q9H0Z9 239 aaKnown RBP16.03■□□□□ 0.16
LIME1-207ENST00000489212 IGHV3-21A0A0B4J1V1 117 aa16.02■□□□□ 0.16
LIME1-207ENST00000489212 ANKRD20A5PA0PJZ0 165 aa16.02■□□□□ 0.16
LIME1-207ENST00000489212 DISC1C4P0D8 188 aa16.02■□□□□ 0.16
LIME1-207ENST00000489212 FRMD6-AS1P0C7T7 363 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms