RNA–Protein interactions for RNA: ENST00000488454.5

SKA1-204, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 3 BASIC

Gene SKA1, Length 669 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-204ENST00000488454 TEX50A0A1B0GTY4 177 aa8.1□□□□□ -1.11
SKA1-204ENST00000488454 C15orf61A6NNL5 157 aa8.1□□□□□ -1.11
SKA1-204ENST00000488454 IFNA17P01571 189 aa8.1□□□□□ -1.11
SKA1-204ENST00000488454 TRAPPC2P0DI81 140 aa8.1□□□□□ -1.11
SKA1-204ENST00000488454 TRAPPC2BP0DI82 140 aa8.1□□□□□ -1.11
SKA1-204ENST00000488454 SULT1A3P0DMM9 295 aa8.1□□□□□ -1.11
SKA1-204ENST00000488454 SULT1A4P0DMN0 295 aa8.1□□□□□ -1.11
SKA1-204ENST00000488454 SPNP16150 400 aa8.1□□□□□ -1.11
SKA1-204ENST00000488454 PROK1P58294 105 aa8.1□□□□□ -1.11
SKA1-204ENST00000488454 OR2B8PP59922 312 aa8.1□□□□□ -1.11
SKA1-204ENST00000488454 NDPQ00604 133 aa8.1□□□□□ -1.11
SKA1-204ENST00000488454 IZUMO4Q1ZYL8 232 aa8.1□□□□□ -1.11
SKA1-204ENST00000488454 MRGPRG-AS1Q2M3A8 158 aa8.1□□□□□ -1.11
SKA1-204ENST00000488454 TMEM65Q6PI78 240 aa8.1□□□□□ -1.11
SKA1-204ENST00000488454 ZNF329Q86UD4 541 aa8.1□□□□□ -1.11
SKA1-204ENST00000488454 MRPL41Q8IXM3 137 aaKnown RBP8.1□□□□□ -1.11
SKA1-204ENST00000488454 C12orf45Q8N5I9 185 aaPredicted RBP8.1□□□□□ -1.11
SKA1-204ENST00000488454 COMMD1Q8N668 190 aa8.1□□□□□ -1.11
SKA1-204ENST00000488454 C3orf56Q8N813 242 aa8.1□□□□□ -1.11
SKA1-204ENST00000488454 LFNGQ8NES3 379 aa8.1□□□□□ -1.11
SKA1-204ENST00000488454 OR5AU1Q8NGC0 362 aa8.1□□□□□ -1.11
SKA1-204ENST00000488454 OR52B4Q8NGK2 314 aa8.1□□□□□ -1.11
SKA1-204ENST00000488454 OR5B3Q8NH48 314 aa8.1□□□□□ -1.11
SKA1-204ENST00000488454 QTRT1Q9BXR0 403 aaKnown RBP8.1□□□□□ -1.11
SKA1-204ENST00000488454 WNT10AQ9GZT5 417 aa8.1□□□□□ -1.11
SKA1-204ENST00000488454 ZNF355PQ9NSJ1 428 aa8.1□□□□□ -1.11
SKA1-204ENST00000488454 TMEM14BQ9NUH8 114 aa8.1□□□□□ -1.11
SKA1-204ENST00000488454 CACNG5Q9UF02 275 aa8.1□□□□□ -1.11
SKA1-204ENST00000488454 ZNF580Q9UK33 172 aa8.1□□□□□ -1.11
SKA1-204ENST00000488454 FOXA2Q9Y261 457 aaPredicted RBP8.1□□□□□ -1.11
SKA1-204ENST00000488454 ZNF257Q9Y2Q1 563 aa8.1□□□□□ -1.11
SKA1-204ENST00000488454 A0A0B4J293 547 aa8.09□□□□□ -1.11
SKA1-204ENST00000488454 A0A1B0GU03 582 aa8.09□□□□□ -1.11
SKA1-204ENST00000488454 A0A1W2PN81 502 aa8.09□□□□□ -1.11
SKA1-204ENST00000488454 SNRPGP15A8MWD9 76 aa8.09□□□□□ -1.11
SKA1-204ENST00000488454 G3V318 75 aa8.09□□□□□ -1.11
SKA1-204ENST00000488454 P0C879 139 aa8.09□□□□□ -1.11
SKA1-204ENST00000488454 EGR2P11161 476 aaPredicted RBP8.09□□□□□ -1.11
SKA1-204ENST00000488454 CHRNA7P36544 502 aa8.09□□□□□ -1.11
SKA1-204ENST00000488454 HSPE1P61604 102 aaKnown RBP8.09□□□□□ -1.11
SKA1-204ENST00000488454 SMCO1Q147U7 214 aa8.09□□□□□ -1.11
SKA1-204ENST00000488454 KRTAP21-3Q3LHN1 58 aa8.09□□□□□ -1.11
SKA1-204ENST00000488454 C10orf55Q5SWW7 151 aa8.09□□□□□ -1.11
SKA1-204ENST00000488454 TEX38Q6PEX7 206 aa8.09□□□□□ -1.11
SKA1-204ENST00000488454 HSD17B13Q7Z5P4 300 aaPredicted RBP8.09□□□□□ -1.11
SKA1-204ENST00000488454 ZNF429Q86V71 674 aa8.09□□□□□ -1.11
SKA1-204ENST00000488454 OR5T1Q8NG75 326 aa8.09□□□□□ -1.11
SKA1-204ENST00000488454 OR4X2Q8NGF9 303 aa8.09□□□□□ -1.11
SKA1-204ENST00000488454 OR1S1Q8NH92 325 aa8.09□□□□□ -1.11
SKA1-204ENST00000488454 SRSF8Q9BRL6 282 aaKnown RBP8.09□□□□□ -1.11
SKA1-204ENST00000488454 ENY2Q9NPA8 101 aa8.09□□□□□ -1.11
SKA1-204ENST00000488454 U3KQE9 123 aa8.09□□□□□ -1.11
SKA1-204ENST00000488454 A0A0G2JRQ6 117 aa8.08□□□□□ -1.12
SKA1-204ENST00000488454 C13orf42A0A1B0GVH6 325 aa8.08□□□□□ -1.12
SKA1-204ENST00000488454 HMX3A6NHT5 357 aa8.08□□□□□ -1.12
SKA1-204ENST00000488454 CYB5BO43169 146 aa8.08□□□□□ -1.12
SKA1-204ENST00000488454 ST8SIA3O43173 380 aa8.08□□□□□ -1.12
SKA1-204ENST00000488454 SSNA1O43805 119 aa8.08□□□□□ -1.12
SKA1-204ENST00000488454 ADAP1O75689 374 aa8.08□□□□□ -1.12
SKA1-204ENST00000488454 APELAP0DMC3 54 aa8.08□□□□□ -1.12
SKA1-204ENST00000488454 SLC25A6P12236 298 aa8.08□□□□□ -1.12
SKA1-204ENST00000488454 MYOD1P15172 320 aa8.08□□□□□ -1.12
SKA1-204ENST00000488454 CRIP2P52943 208 aaPredicted RBP8.08□□□□□ -1.12
SKA1-204ENST00000488454 SSBP2P81877 361 aaPredicted RBP8.08□□□□□ -1.12
SKA1-204ENST00000488454 ERHP84090 104 aaKnown RBP8.08□□□□□ -1.12
SKA1-204ENST00000488454 NMSQ5H8A3 153 aa8.08□□□□□ -1.12
SKA1-204ENST00000488454 GGNBP1Q5YKI7 109 aa8.08□□□□□ -1.12
SKA1-204ENST00000488454 Q6ZRM9 215 aa8.08□□□□□ -1.12
SKA1-204ENST00000488454 MINDY2Q8NBR6 621 aa8.08□□□□□ -1.12
SKA1-204ENST00000488454 OR5M8Q8NGP6 311 aa8.08□□□□□ -1.12
SKA1-204ENST00000488454 PLEKHA3Q9HB20 300 aa8.08□□□□□ -1.12
SKA1-204ENST00000488454 NDUFA4L2Q9NRX3 87 aa8.08□□□□□ -1.12
SKA1-204ENST00000488454 COA4Q9NYJ1 87 aa8.08□□□□□ -1.12
SKA1-204ENST00000488454 FBXO7Q9Y3I1 522 aa8.08□□□□□ -1.12
SKA1-204ENST00000488454 TCRBV4S1A1TA0A5B7 111 aa8.07□□□□□ -1.12
SKA1-204ENST00000488454 C5orf51A6NDU8 294 aa8.07□□□□□ -1.12
SKA1-204ENST00000488454 DBX1A6NMT0 343 aa8.07□□□□□ -1.12
SKA1-204ENST00000488454 CEBPZOSA8MTT3 80 aa8.07□□□□□ -1.12
SKA1-204ENST00000488454 FAM25EA8MYX2 175 aa8.07□□□□□ -1.12
SKA1-204ENST00000488454 E7EUB6 86 aa8.07□□□□□ -1.12
SKA1-204ENST00000488454 IGHG4P01861 327 aa8.07□□□□□ -1.12
SKA1-204ENST00000488454 ELANEP08246 267 aa8.07□□□□□ -1.12
SKA1-204ENST00000488454 PF4V1P10720 104 aa8.07□□□□□ -1.12
SKA1-204ENST00000488454 DEFA4P12838 97 aa8.07□□□□□ -1.12
SKA1-204ENST00000488454 PPIFP30405 207 aaKnown RBP8.07□□□□□ -1.12
SKA1-204ENST00000488454 HOXA1P49639 335 aaPredicted RBP8.07□□□□□ -1.12
SKA1-204ENST00000488454 SPCS3P61009 180 aa8.07□□□□□ -1.12
SKA1-204ENST00000488454 PRCDQ00LT1 54 aa8.07□□□□□ -1.12
SKA1-204ENST00000488454 FOXE3Q13461 319 aa8.07□□□□□ -1.12
SKA1-204ENST00000488454 TATDN3Q17R31 274 aa8.07□□□□□ -1.12
SKA1-204ENST00000488454 CXorf66Q5JRM2 361 aaPredicted RBP8.07□□□□□ -1.12
SKA1-204ENST00000488454 TTC9CQ8N5M4 171 aa8.07□□□□□ -1.12
SKA1-204ENST00000488454 OR52E5Q8NH55 327 aa8.07□□□□□ -1.12
SKA1-204ENST00000488454 GSKIPQ9P0R6 139 aa8.07□□□□□ -1.12
SKA1-204ENST00000488454 ATRQ13535 2644 aa8.06□□□□□ -1.12
SKA1-204ENST00000488454 NPIPB5A8MRT5 1133 aa8.06□□□□□ -1.12
SKA1-204ENST00000488454 TEX22C9J3V5 150 aa8.06□□□□□ -1.12
SKA1-204ENST00000488454 H3BUA1 57 aa8.06□□□□□ -1.12
SKA1-204ENST00000488454 MED6O75586 246 aa8.06□□□□□ -1.12
SKA1-204ENST00000488454 OR13C7P0DN81 318 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms