RNA–Protein interactions for RNA: ENST00000488228.1

UBE4B-210, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-210ENST00000488228 FAM240BA0A1B0GVZ2 78 aa8.6□□□□□ -1.03
UBE4B-210ENST00000488228 RBMXL2O75526 392 aaKnown RBP8.6□□□□□ -1.03
UBE4B-210ENST00000488228 ATG12O94817 140 aa8.6□□□□□ -1.03
UBE4B-210ENST00000488228 SFT2D2O95562 160 aa8.6□□□□□ -1.03
UBE4B-210ENST00000488228 TRGV3P03979 118 aa8.6□□□□□ -1.03
UBE4B-210ENST00000488228 TCRBP04435 133 aa8.6□□□□□ -1.03
UBE4B-210ENST00000488228 FGF2P09038 288 aa8.6□□□□□ -1.03
UBE4B-210ENST00000488228 DHRS2Q13268 280 aa8.6□□□□□ -1.03
UBE4B-210ENST00000488228 MZT2BQ6NZ67 158 aa8.6□□□□□ -1.03
UBE4B-210ENST00000488228 TMEM65Q6PI78 240 aa8.6□□□□□ -1.03
UBE4B-210ENST00000488228 C8orf86Q6ZUL3 223 aa8.6□□□□□ -1.03
UBE4B-210ENST00000488228 CADM3Q8N126 398 aa8.6□□□□□ -1.03
UBE4B-210ENST00000488228 OR1L8Q8NGR8 309 aa8.6□□□□□ -1.03
UBE4B-210ENST00000488228 ENKURQ8TC29 256 aa8.6□□□□□ -1.03
UBE4B-210ENST00000488228 OR5B12Q96R08 314 aa8.6□□□□□ -1.03
UBE4B-210ENST00000488228 CACNG5Q9UF02 275 aa8.6□□□□□ -1.03
UBE4B-210ENST00000488228 KCNIP3Q9Y2W7 256 aa8.6□□□□□ -1.03
UBE4B-210ENST00000488228 C9orf170A2RU37 121 aa8.59□□□□□ -1.03
UBE4B-210ENST00000488228 ST8SIA3O43173 380 aa8.59□□□□□ -1.03
UBE4B-210ENST00000488228 NXPH3O95157 252 aa8.59□□□□□ -1.03
UBE4B-210ENST00000488228 IGHV3-11P01762 117 aa8.59□□□□□ -1.03
UBE4B-210ENST00000488228 OR4E1P0C645 316 aa8.59□□□□□ -1.03
UBE4B-210ENST00000488228 RAB9AP51151 201 aa8.59□□□□□ -1.03
UBE4B-210ENST00000488228 RAB25P57735 213 aa8.59□□□□□ -1.03
UBE4B-210ENST00000488228 UBE2MP61081 183 aaKnown RBP8.59□□□□□ -1.03
UBE4B-210ENST00000488228 SRPXP78539 464 aa8.59□□□□□ -1.03
UBE4B-210ENST00000488228 WT1-ASQ06250 92 aa8.59□□□□□ -1.03
UBE4B-210ENST00000488228 KIAA0141Q14154 515 aaPredicted RBP8.59□□□□□ -1.03
UBE4B-210ENST00000488228 C4orf46Q504U0 113 aa8.59□□□□□ -1.03
UBE4B-210ENST00000488228 NMSQ5H8A3 153 aa8.59□□□□□ -1.03
UBE4B-210ENST00000488228 ETV3LQ6ZN32 361 aa8.59□□□□□ -1.03
UBE4B-210ENST00000488228 Q6ZRM9 215 aa8.59□□□□□ -1.03
UBE4B-210ENST00000488228 LYZL2Q7Z4W2 148 aa8.59□□□□□ -1.03
UBE4B-210ENST00000488228 NRARPQ7Z6K4 114 aa8.59□□□□□ -1.03
UBE4B-210ENST00000488228 LYG2Q86SG7 212 aa8.59□□□□□ -1.03
UBE4B-210ENST00000488228 LGI3Q8N145 548 aa8.59□□□□□ -1.03
UBE4B-210ENST00000488228 OR52B4Q8NGK2 314 aa8.59□□□□□ -1.03
UBE4B-210ENST00000488228 IL22RA2Q969J5 263 aa8.59□□□□□ -1.03
UBE4B-210ENST00000488228 GPR146Q96CH1 333 aa8.59□□□□□ -1.03
UBE4B-210ENST00000488228 DUX3Q96PT4 197 aa8.59□□□□□ -1.03
UBE4B-210ENST00000488228 ALX4Q9H161 411 aaPredicted RBP8.59□□□□□ -1.03
UBE4B-210ENST00000488228 NDUFA4L2Q9NRX3 87 aa8.59□□□□□ -1.03
UBE4B-210ENST00000488228 ZNF257Q9Y2Q1 563 aa8.59□□□□□ -1.03
UBE4B-210ENST00000488228 NOTCH1P46531 2555 aa8.59□□□□□ -1.03
UBE4B-210ENST00000488228 A0A0B4J2A0 478 aa8.58□□□□□ -1.04
UBE4B-210ENST00000488228 NPIPB5A8MRT5 1133 aa8.58□□□□□ -1.04
UBE4B-210ENST00000488228 TRAPPC2P0DI81 140 aa8.58□□□□□ -1.04
UBE4B-210ENST00000488228 TRAPPC2BP0DI82 140 aa8.58□□□□□ -1.04
UBE4B-210ENST00000488228 OR13C7P0DN81 318 aa8.58□□□□□ -1.04
UBE4B-210ENST00000488228 PSMB6P28072 239 aa8.58□□□□□ -1.04
UBE4B-210ENST00000488228 MECP2P51608 486 aaKnown RBP8.58□□□□□ -1.04
UBE4B-210ENST00000488228 PRCDQ00LT1 54 aa8.58□□□□□ -1.04
UBE4B-210ENST00000488228 PRR31Q5SQ13 230 aa8.58□□□□□ -1.04
UBE4B-210ENST00000488228 FAM219AQ8IW50 185 aa8.58□□□□□ -1.04
UBE4B-210ENST00000488228 TTC9CQ8N5M4 171 aa8.58□□□□□ -1.04
UBE4B-210ENST00000488228 ZNF491Q8N8L2 437 aa8.58□□□□□ -1.04
UBE4B-210ENST00000488228 OR5B3Q8NH48 314 aa8.58□□□□□ -1.04
UBE4B-210ENST00000488228 C4orf3Q8WVX3 66 aa8.58□□□□□ -1.04
UBE4B-210ENST00000488228 LSM10Q969L4 123 aaKnown RBP8.58□□□□□ -1.04
UBE4B-210ENST00000488228 TMEM68Q96MH6 324 aa8.58□□□□□ -1.04
UBE4B-210ENST00000488228 SEC22CQ9BRL7 303 aa8.58□□□□□ -1.04
UBE4B-210ENST00000488228 SLA2Q9H6Q3 261 aa8.58□□□□□ -1.04
UBE4B-210ENST00000488228 ZFP57Q9NU63 452 aa8.58□□□□□ -1.04
UBE4B-210ENST00000488228 SHPKQ9UHJ6 478 aa8.58□□□□□ -1.04
UBE4B-210ENST00000488228 NOTCH3Q9UM47 2321 aa8.58□□□□□ -1.04
UBE4B-210ENST00000488228 H3BUA1 57 aa8.57□□□□□ -1.04
UBE4B-210ENST00000488228 OR2J3O76001 311 aa8.57□□□□□ -1.04
UBE4B-210ENST00000488228 H2AFB2P0C5Z0 115 aa8.57□□□□□ -1.04
UBE4B-210ENST00000488228 CTRB1P17538 263 aa8.57□□□□□ -1.04
UBE4B-210ENST00000488228 CDX1P47902 265 aaPredicted RBP8.57□□□□□ -1.04
UBE4B-210ENST00000488228 DEFA1P59665 94 aa8.57□□□□□ -1.04
UBE4B-210ENST00000488228 DEFA3P59666 94 aa8.57□□□□□ -1.04
UBE4B-210ENST00000488228 RHOGP84095 191 aa8.57□□□□□ -1.04
UBE4B-210ENST00000488228 CTRB2Q6GPI1 263 aa8.57□□□□□ -1.04
UBE4B-210ENST00000488228 THOC7Q6I9Y2 204 aaKnown RBP8.57□□□□□ -1.04
UBE4B-210ENST00000488228 C11orf87Q6NUJ2 197 aa8.57□□□□□ -1.04
UBE4B-210ENST00000488228 ZNF429Q86V71 674 aa8.57□□□□□ -1.04
UBE4B-210ENST00000488228 LRTM2Q8N967 370 aa8.57□□□□□ -1.04
UBE4B-210ENST00000488228 OR4F17Q8NGA8 305 aa8.57□□□□□ -1.04
UBE4B-210ENST00000488228 RAX2Q96IS3 184 aa8.57□□□□□ -1.04
UBE4B-210ENST00000488228 UBE2E2Q96LR5 201 aa8.57□□□□□ -1.04
UBE4B-210ENST00000488228 OR4F4Q96R69 305 aa8.57□□□□□ -1.04
UBE4B-210ENST00000488228 PLEKHA3Q9HB20 300 aa8.57□□□□□ -1.04
UBE4B-210ENST00000488228 FKBP11Q9NYL4 201 aa8.57□□□□□ -1.04
UBE4B-210ENST00000488228 DMRT1Q9Y5R6 373 aa8.57□□□□□ -1.04
UBE4B-210ENST00000488228 DUXBA0A1W2PPF3 345 aa8.56□□□□□ -1.04
UBE4B-210ENST00000488228 ADAP1O75689 374 aa8.56□□□□□ -1.04
UBE4B-210ENST00000488228 DUS4LO95620 317 aaKnown RBP8.56□□□□□ -1.04
UBE4B-210ENST00000488228 IFNA17P01571 189 aa8.56□□□□□ -1.04
UBE4B-210ENST00000488228 PF4P02776 101 aa8.56□□□□□ -1.04
UBE4B-210ENST00000488228 CRYGCP07315 174 aa8.56□□□□□ -1.04
UBE4B-210ENST00000488228 HOXB5P09067 269 aa8.56□□□□□ -1.04
UBE4B-210ENST00000488228 LGALS1P09382 135 aaKnown RBP8.56□□□□□ -1.04
UBE4B-210ENST00000488228 SULT1A3P0DMM9 295 aa8.56□□□□□ -1.04
UBE4B-210ENST00000488228 SULT1A4P0DMN0 295 aa8.56□□□□□ -1.04
UBE4B-210ENST00000488228 SPNP16150 400 aa8.56□□□□□ -1.04
UBE4B-210ENST00000488228 HOXA1P49639 335 aaPredicted RBP8.56□□□□□ -1.04
UBE4B-210ENST00000488228 MFAP2P55001 183 aa8.56□□□□□ -1.04
UBE4B-210ENST00000488228 HSPE1P61604 102 aaKnown RBP8.56□□□□□ -1.04
UBE4B-210ENST00000488228 EXOSC2Q13868 293 aaKnown RBP8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms