RNA–Protein interactions for RNA: ENST00000488186.5

C9orf3-219, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-219ENST00000488186 HSD17B13Q7Z5P4 300 aaPredicted RBP12.3□□□□□ -0.44
C9orf3-219ENST00000488186 OR5B3Q8NH48 314 aa12.3□□□□□ -0.44
C9orf3-219ENST00000488186 COQ8AQ8NI60 647 aa12.3□□□□□ -0.44
C9orf3-219ENST00000488186 LHFPL5Q8TAF8 219 aa12.3□□□□□ -0.44
C9orf3-219ENST00000488186 FAM110DQ8TAY7 271 aaPredicted RBP12.3□□□□□ -0.44
C9orf3-219ENST00000488186 NUDT15Q9NV35 164 aa12.3□□□□□ -0.44
C9orf3-219ENST00000488186 PKD1L1Q8TDX9 2849 aa12.3□□□□□ -0.44
C9orf3-219ENST00000488186 TET2Q6N021 2002 aaPredicted RBP12.3□□□□□ -0.44
C9orf3-219ENST00000488186 A0A0B4J2A0 478 aa12.29□□□□□ -0.44
C9orf3-219ENST00000488186 C9orf170A2RU37 121 aa12.29□□□□□ -0.44
C9orf3-219ENST00000488186 H3BUA1 57 aa12.29□□□□□ -0.44
C9orf3-219ENST00000488186 HSPE1P61604 102 aaKnown RBP12.29□□□□□ -0.44
C9orf3-219ENST00000488186 C19orf54Q5BKX5 351 aa12.29□□□□□ -0.44
C9orf3-219ENST00000488186 ASPHD1Q5U4P2 390 aa12.29□□□□□ -0.44
C9orf3-219ENST00000488186 LYZL2Q7Z4W2 148 aa12.29□□□□□ -0.44
C9orf3-219ENST00000488186 TTC9CQ8N5M4 171 aa12.29□□□□□ -0.44
C9orf3-219ENST00000488186 SLC35G3Q8N808 338 aa12.29□□□□□ -0.44
C9orf3-219ENST00000488186 KLHL30-AS1Q8NEE0 82 aa12.29□□□□□ -0.44
C9orf3-219ENST00000488186 OR4F17Q8NGA8 305 aa12.29□□□□□ -0.44
C9orf3-219ENST00000488186 LSM10Q969L4 123 aaKnown RBP12.29□□□□□ -0.44
C9orf3-219ENST00000488186 GPR146Q96CH1 333 aa12.29□□□□□ -0.44
C9orf3-219ENST00000488186 OR4F4Q96R69 305 aa12.29□□□□□ -0.44
C9orf3-219ENST00000488186 SRSF8Q9BRL6 282 aaKnown RBP12.29□□□□□ -0.44
C9orf3-219ENST00000488186 KLK15Q9H2R5 256 aa12.29□□□□□ -0.44
C9orf3-219ENST00000488186 ENY2Q9NPA8 101 aa12.29□□□□□ -0.44
C9orf3-219ENST00000488186 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.29□□□□□ -0.44
C9orf3-219ENST00000488186 TMEM14BQ9NUH8 114 aa12.29□□□□□ -0.44
C9orf3-219ENST00000488186 SHPKQ9UHJ6 478 aa12.29□□□□□ -0.44
C9orf3-219ENST00000488186 A0A0G2JLM5 398 aa12.28□□□□□ -0.44
C9orf3-219ENST00000488186 C13orf42A0A1B0GVH6 325 aa12.28□□□□□ -0.44
C9orf3-219ENST00000488186 TEX22C9J3V5 150 aa12.28□□□□□ -0.44
C9orf3-219ENST00000488186 E7EUB6 86 aa12.28□□□□□ -0.44
C9orf3-219ENST00000488186 CYB5BO43169 146 aa12.28□□□□□ -0.44
C9orf3-219ENST00000488186 SOX15O60248 233 aa12.28□□□□□ -0.44
C9orf3-219ENST00000488186 REG1AP05451 166 aa12.28□□□□□ -0.44
C9orf3-219ENST00000488186 PSMB6P28072 239 aa12.28□□□□□ -0.44
C9orf3-219ENST00000488186 CDX1P47902 265 aaPredicted RBP12.28□□□□□ -0.44
C9orf3-219ENST00000488186 LYG2Q86SG7 212 aa12.28□□□□□ -0.44
C9orf3-219ENST00000488186 RNF152Q8N8N0 203 aa12.28□□□□□ -0.44
C9orf3-219ENST00000488186 ALX4Q9H161 411 aaPredicted RBP12.28□□□□□ -0.44
C9orf3-219ENST00000488186 NDUFA4L2Q9NRX3 87 aa12.28□□□□□ -0.44
C9orf3-219ENST00000488186 ZNF257Q9Y2Q1 563 aa12.28□□□□□ -0.44
C9orf3-219ENST00000488186 TNCP24821 2201 aa12.27□□□□□ -0.44
C9orf3-219ENST00000488186 A0A0B4J293 547 aa12.27□□□□□ -0.45
C9orf3-219ENST00000488186 DUXBA0A1W2PPF3 345 aa12.27□□□□□ -0.45
C9orf3-219ENST00000488186 NPIPB5A8MRT5 1133 aa12.27□□□□□ -0.45
C9orf3-219ENST00000488186 SULT1A3P0DMM9 295 aa12.27□□□□□ -0.45
C9orf3-219ENST00000488186 SULT1A4P0DMN0 295 aa12.27□□□□□ -0.45
C9orf3-219ENST00000488186 OR13C7P0DN81 318 aa12.27□□□□□ -0.45
C9orf3-219ENST00000488186 AREGP15514 252 aa12.27□□□□□ -0.45
C9orf3-219ENST00000488186 ERHP84090 104 aaKnown RBP12.27□□□□□ -0.45
C9orf3-219ENST00000488186 DHRS2Q13268 280 aa12.27□□□□□ -0.45
C9orf3-219ENST00000488186 ANKRD55Q3KP44 614 aa12.27□□□□□ -0.45
C9orf3-219ENST00000488186 PLET1Q6UQ28 207 aa12.27□□□□□ -0.45
C9orf3-219ENST00000488186 ZNF429Q86V71 674 aa12.27□□□□□ -0.45
C9orf3-219ENST00000488186 ZNF491Q8N8L2 437 aa12.27□□□□□ -0.45
C9orf3-219ENST00000488186 OR10W1Q8NGF6 305 aa12.27□□□□□ -0.45
C9orf3-219ENST00000488186 UBE2E2Q96LR5 201 aa12.27□□□□□ -0.45
C9orf3-219ENST00000488186 PLEKHA3Q9HB20 300 aa12.27□□□□□ -0.45
C9orf3-219ENST00000488186 CACNG5Q9UF02 275 aa12.27□□□□□ -0.45
C9orf3-219ENST00000488186 CACFD1Q9UGQ2 172 aa12.27□□□□□ -0.45
C9orf3-219ENST00000488186 A0A0G2JRQ6 117 aa12.26□□□□□ -0.45
C9orf3-219ENST00000488186 DBX1A6NMT0 343 aa12.26□□□□□ -0.45
C9orf3-219ENST00000488186 ST8SIA3O43173 380 aa12.26□□□□□ -0.45
C9orf3-219ENST00000488186 IFNA21P01568 189 aa12.26□□□□□ -0.45
C9orf3-219ENST00000488186 PF4P02776 101 aa12.26□□□□□ -0.45
C9orf3-219ENST00000488186 PRH1P02810 166 aa12.26□□□□□ -0.45
C9orf3-219ENST00000488186 HOXB5P09067 269 aa12.26□□□□□ -0.45
C9orf3-219ENST00000488186 P0C879 139 aa12.26□□□□□ -0.45
C9orf3-219ENST00000488186 NRARPQ7Z6K4 114 aa12.26□□□□□ -0.45
C9orf3-219ENST00000488186 LRTM2Q8N967 370 aa12.26□□□□□ -0.45
C9orf3-219ENST00000488186 UXS1Q8NBZ7 420 aa12.26□□□□□ -0.45
C9orf3-219ENST00000488186 OR1S1Q8NH92 325 aa12.26□□□□□ -0.45
C9orf3-219ENST00000488186 OR5B12Q96R08 314 aa12.26□□□□□ -0.45
C9orf3-219ENST00000488186 TMED3Q9Y3Q3 217 aa12.26□□□□□ -0.45
C9orf3-219ENST00000488186 FBN3Q75N90 2809 aa12.26□□□□□ -0.45
C9orf3-219ENST00000488186 VWFP04275 2813 aa12.25□□□□□ -0.45
C9orf3-219ENST00000488186 A0A1B0GW64 132 aa12.25□□□□□ -0.45
C9orf3-219ENST00000488186 CGB1A6NKQ9 187 aa12.25□□□□□ -0.45
C9orf3-219ENST00000488186 DUS4LO95620 317 aaKnown RBP12.25□□□□□ -0.45
C9orf3-219ENST00000488186 CRYGCP07315 174 aa12.25□□□□□ -0.45
C9orf3-219ENST00000488186 HIST1H1BP16401 226 aaKnown RBP12.25□□□□□ -0.45
C9orf3-219ENST00000488186 CTRB1P17538 263 aa12.25□□□□□ -0.45
C9orf3-219ENST00000488186 HOXA1P49639 335 aaPredicted RBP12.25□□□□□ -0.45
C9orf3-219ENST00000488186 PRCDQ00LT1 54 aa12.25□□□□□ -0.45
C9orf3-219ENST00000488186 ATP5G2Q06055 141 aa12.25□□□□□ -0.45
C9orf3-219ENST00000488186 SMCO1Q147U7 214 aa12.25□□□□□ -0.45
C9orf3-219ENST00000488186 SPINK9Q5DT21 86 aa12.25□□□□□ -0.45
C9orf3-219ENST00000488186 CTRB2Q6GPI1 263 aa12.25□□□□□ -0.45
C9orf3-219ENST00000488186 Q6ZRM9 215 aa12.25□□□□□ -0.45
C9orf3-219ENST00000488186 C8orf86Q6ZUL3 223 aa12.25□□□□□ -0.45
C9orf3-219ENST00000488186 DUSP18Q8NEJ0 188 aa12.25□□□□□ -0.45
C9orf3-219ENST00000488186 USMG5Q96IX5 58 aa12.25□□□□□ -0.45
C9orf3-219ENST00000488186 THYN1Q9P016 225 aa12.25□□□□□ -0.45
C9orf3-219ENST00000488186 A0A1B0GU03 582 aa12.24□□□□□ -0.45
C9orf3-219ENST00000488186 IGLC7A0M8Q6 106 aa12.24□□□□□ -0.45
C9orf3-219ENST00000488186 CEBPZOSA8MTT3 80 aa12.24□□□□□ -0.45
C9orf3-219ENST00000488186 ADARB2-AS1A8MUL3 147 aa12.24□□□□□ -0.45
C9orf3-219ENST00000488186 OR2J3O76001 311 aa12.24□□□□□ -0.45
C9orf3-219ENST00000488186 BRI3O95415 125 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms