RNA–Protein interactions for RNA: ENST00000488058.1

RNF38-208, Transcript of ring finger protein 38, humanhuman

TSL 3

Gene RNF38, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-208ENST00000488058 H3BMQ9 156 aa18.07■□□□□ 0.48
RNF38-208ENST00000488058 GGCTO75223 188 aaKnown RBP18.07■□□□□ 0.48
RNF38-208ENST00000488058 OR2C1O95371 312 aa18.07■□□□□ 0.48
RNF38-208ENST00000488058 OR13C7P0DN81 318 aa18.07■□□□□ 0.48
RNF38-208ENST00000488058 MRPS10P82664 201 aaKnown RBP18.07■□□□□ 0.48
RNF38-208ENST00000488058 STEAP1BQ6NZ63 245 aa18.07■□□□□ 0.48
RNF38-208ENST00000488058 LHFPL1Q86WI0 220 aa18.07■□□□□ 0.48
RNF38-208ENST00000488058 ISOC1Q96CN7 298 aa18.07■□□□□ 0.48
RNF38-208ENST00000488058 PRNDQ9UKY0 176 aa18.07■□□□□ 0.48
RNF38-208ENST00000488058 MFSD2BA6NFX1 497 aa18.06■□□□□ 0.48
RNF38-208ENST00000488058 SERPINE2P07093 398 aa18.06■□□□□ 0.48
RNF38-208ENST00000488058 MECP2P51608 486 aaKnown RBP18.06■□□□□ 0.48
RNF38-208ENST00000488058 PIGPP57054 158 aa18.06■□□□□ 0.48
RNF38-208ENST00000488058 H2BFWTQ7Z2G1 175 aa18.06■□□□□ 0.48
RNF38-208ENST00000488058 MRGPRFQ96AM1 343 aa18.06■□□□□ 0.48
RNF38-208ENST00000488058 TSC22D3Q99576 134 aa18.06■□□□□ 0.48
RNF38-208ENST00000488058 FAM212BQ9NTI7 297 aaPredicted RBP18.06■□□□□ 0.48
RNF38-208ENST00000488058 H0Y980 276 aa18.05■□□□□ 0.48
RNF38-208ENST00000488058 CYB5BO43169 146 aa18.05■□□□□ 0.48
RNF38-208ENST00000488058 CD74P04233 296 aa18.05■□□□□ 0.48
RNF38-208ENST00000488058 WT1-ASQ06250 92 aa18.05■□□□□ 0.48
RNF38-208ENST00000488058 SLC25A24Q6NUK1 477 aa18.05■□□□□ 0.48
RNF38-208ENST00000488058 FAAP20Q6NZ36 180 aa18.05■□□□□ 0.48
RNF38-208ENST00000488058 HSD17B13Q7Z5P4 300 aaPredicted RBP18.05■□□□□ 0.48
RNF38-208ENST00000488058 GDPD1Q8N9F7 314 aa18.05■□□□□ 0.48
RNF38-208ENST00000488058 LSM10Q969L4 123 aaKnown RBP18.05■□□□□ 0.48
RNF38-208ENST00000488058 ZNF486Q96H40 463 aaPredicted RBP18.05■□□□□ 0.48
RNF38-208ENST00000488058 CXorf58Q96LI9 332 aa18.05■□□□□ 0.48
RNF38-208ENST00000488058 ZC4H2Q9NQZ6 224 aa18.05■□□□□ 0.48
RNF38-208ENST00000488058 NDUFA4L2Q9NRX3 87 aa18.05■□□□□ 0.48
RNF38-208ENST00000488058 THYN1Q9P016 225 aa18.05■□□□□ 0.48
RNF38-208ENST00000488058 DMRT1Q9Y5R6 373 aa18.05■□□□□ 0.48
RNF38-208ENST00000488058 IGKV1-39P01597 117 aa18.04■□□□□ 0.48
RNF38-208ENST00000488058 IGKV1D-39P04432 117 aa18.04■□□□□ 0.48
RNF38-208ENST00000488058 RND3P61587 244 aa18.04■□□□□ 0.48
RNF38-208ENST00000488058 KLK9Q2XQG4 91 aa18.04■□□□□ 0.48
RNF38-208ENST00000488058 OR4A16Q8NH70 328 aa18.04■□□□□ 0.48
RNF38-208ENST00000488058 SMIM4Q8WVI0 70 aa18.04■□□□□ 0.48
RNF38-208ENST00000488058 SEC22AQ96IW7 307 aa18.04■□□□□ 0.48
RNF38-208ENST00000488058 FKBP11Q9NYL4 201 aa18.04■□□□□ 0.48
RNF38-208ENST00000488058 COPZ2Q9P299 210 aa18.04■□□□□ 0.48
RNF38-208ENST00000488058 KLK9Q9UKQ9 250 aa18.04■□□□□ 0.48
RNF38-208ENST00000488058 TRBV7-1A0A0A6YYK4 115 aa18.03■□□□□ 0.48
RNF38-208ENST00000488058 CCDC160A6NGH7 325 aa18.03■□□□□ 0.48
RNF38-208ENST00000488058 DBX1A6NMT0 343 aa18.03■□□□□ 0.48
RNF38-208ENST00000488058 C15orf61A6NNL5 157 aa18.03■□□□□ 0.48
RNF38-208ENST00000488058 NHLRC4P0CG21 123 aaPredicted RBP18.03■□□□□ 0.48
RNF38-208ENST00000488058 PTBP1P26599 531 aaKnown RBP eCLIP18.03■□□□□ 0.489e-10■■■■■ 40.8
RNF38-208ENST00000488058 SSBP1Q04837 148 aaKnown RBP18.03■□□□□ 0.48
RNF38-208ENST00000488058 LCN12Q6JVE5 192 aa18.03■□□□□ 0.48
RNF38-208ENST00000488058 CADM3Q8N126 398 aa18.03■□□□□ 0.48
RNF38-208ENST00000488058 OR5B3Q8NH48 314 aa18.03■□□□□ 0.48
RNF38-208ENST00000488058 TERB2Q8NHR7 220 aa18.03■□□□□ 0.48
RNF38-208ENST00000488058 ZFAND1Q8TCF1 268 aa18.03■□□□□ 0.48
RNF38-208ENST00000488058 MARCH1Q8TCQ1 289 aa18.03■□□□□ 0.48
RNF38-208ENST00000488058 DYNLRB2Q8TF09 96 aa18.03■□□□□ 0.48
RNF38-208ENST00000488058 TMEM56Q96MV1 263 aa18.03■□□□□ 0.48
RNF38-208ENST00000488058 SIGLEC8Q9NYZ4 499 aa18.03■□□□□ 0.48
RNF38-208ENST00000488058 ZNF320A2RRD8 509 aa18.02■□□□□ 0.48
RNF38-208ENST00000488058 CLEC3BP05452 202 aa18.02■□□□□ 0.48
RNF38-208ENST00000488058 GPR183P32249 361 aa18.02■□□□□ 0.48
RNF38-208ENST00000488058 MEF2DQ14814 521 aa18.02■□□□□ 0.48
RNF38-208ENST00000488058 CCDC71LQ8N9Z2 235 aa18.02■□□□□ 0.48
RNF38-208ENST00000488058 OR13C8Q8NGS7 320 aa18.02■□□□□ 0.48
RNF38-208ENST00000488058 MCFD2Q8NI22 146 aa18.02■□□□□ 0.48
RNF38-208ENST00000488058 TP53RKQ96S44 253 aa18.02■□□□□ 0.48
RNF38-208ENST00000488058 SLIRPQ9GZT3 109 aaKnown RBP18.02■□□□□ 0.48
RNF38-208ENST00000488058 RABL2AQ9UBK7 228 aaPredicted RBP18.02■□□□□ 0.48
RNF38-208ENST00000488058 RABL2BQ9UNT1 228 aa18.02■□□□□ 0.48
RNF38-208ENST00000488058 C3orf85A0A1B0GTC6 90 aa18.01■□□□□ 0.47
RNF38-208ENST00000488058 DISC1C4P0D8 188 aa18.01■□□□□ 0.47
RNF38-208ENST00000488058 FRMD6-AS1P0C7T7 363 aa18.01■□□□□ 0.47
RNF38-208ENST00000488058 EDN2P20800 178 aa18.01■□□□□ 0.47
RNF38-208ENST00000488058 Q8N402 240 aa18.01■□□□□ 0.47
RNF38-208ENST00000488058 ZNF502Q8TBZ5 544 aa18.01■□□□□ 0.47
RNF38-208ENST00000488058 TMEM14BQ9NUH8 114 aa18.01■□□□□ 0.47
RNF38-208ENST00000488058 F11RQ9Y624 299 aaKnown RBP18.01■□□□□ 0.47
RNF38-208ENST00000488058 CEPT1Q9Y6K0 416 aa18.01■□□□□ 0.47
RNF38-208ENST00000488058 DNAH9Q9NYC9 4486 aa18■□□□□ 0.47
RNF38-208ENST00000488058 IGHV3-21A0A0B4J1V1 117 aa18■□□□□ 0.47
RNF38-208ENST00000488058 IZUMO1RA6ND01 250 aa18■□□□□ 0.47
RNF38-208ENST00000488058 CTDSPLO15194 276 aa18■□□□□ 0.47
RNF38-208ENST00000488058 AKR1C2P52895 323 aa18■□□□□ 0.47
RNF38-208ENST00000488058 IZUMO4Q1ZYL8 232 aa18■□□□□ 0.47
RNF38-208ENST00000488058 TRIM16LQ309B1 348 aa18■□□□□ 0.47
RNF38-208ENST00000488058 SP6Q3SY56 376 aa18■□□□□ 0.47
RNF38-208ENST00000488058 FAM106AQ4KMX7 169 aa18■□□□□ 0.47
RNF38-208ENST00000488058 GPHB5Q86YW7 130 aa18■□□□□ 0.47
RNF38-208ENST00000488058 SGPP2Q8IWX5 399 aa18■□□□□ 0.47
RNF38-208ENST00000488058 U3KQK5 164 aa18■□□□□ 0.47
RNF38-208ENST00000488058 C2orf70A6NJV1 201 aa17.99■□□□□ 0.47
RNF38-208ENST00000488058 AKAIN1P0CW23 69 aa17.99■□□□□ 0.47
RNF38-208ENST00000488058 FOLR2P14207 255 aa17.99■□□□□ 0.47
RNF38-208ENST00000488058 MFAP2P55001 183 aa17.99■□□□□ 0.47
RNF38-208ENST00000488058 ADAMTSL5Q6ZMM2 481 aa17.99■□□□□ 0.47
RNF38-208ENST00000488058 OR4C16Q8NGL9 310 aa17.99■□□□□ 0.47
RNF38-208ENST00000488058 C14orf166Q9Y224 244 aaKnown RBP17.99■□□□□ 0.47
RNF38-208ENST00000488058 IGHV3-35A0A0C4DH35 117 aa17.98■□□□□ 0.47
RNF38-208ENST00000488058 LGALS9O00182 355 aa17.98■□□□□ 0.47
RNF38-208ENST00000488058 CTSDP07339 412 aaPredicted RBP17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms