RNA–Protein interactions for RNA: ENST00000487984.1

SDC3-204, Transcript of syndecan 3, humanhuman

TSL 3

Gene SDC3, Length 355 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-204ENST00000487984 SLC25A21Q9BQT8 299 aaPredicted RBP9.34□□□□□ -0.91
SDC3-204ENST00000487984 CCL28Q9NRJ3 127 aa9.34□□□□□ -0.91
SDC3-204ENST00000487984 ZNF257Q9Y2Q1 563 aa9.34□□□□□ -0.91
SDC3-204ENST00000487984 IZUMO1RA6ND01 250 aa9.33□□□□□ -0.92
SDC3-204ENST00000487984 NPIPB5A8MRT5 1133 aa9.33□□□□□ -0.92
SDC3-204ENST00000487984 M0QYG6 137 aa9.33□□□□□ -0.92
SDC3-204ENST00000487984 PPYP01298 95 aa9.33□□□□□ -0.92
SDC3-204ENST00000487984 PMP2P02689 132 aa9.33□□□□□ -0.92
SDC3-204ENST00000487984 ZNF735P0CB33 412 aa9.33□□□□□ -0.92
SDC3-204ENST00000487984 MAS1LP35410 378 aa9.33□□□□□ -0.92
SDC3-204ENST00000487984 KIR2DS2P43631 304 aa9.33□□□□□ -0.92
SDC3-204ENST00000487984 MECP2P51608 486 aaKnown RBP9.33□□□□□ -0.92
SDC3-204ENST00000487984 OXA1LQ15070 435 aa9.33□□□□□ -0.92
SDC3-204ENST00000487984 MSMO1Q15800 293 aa9.33□□□□□ -0.92
SDC3-204ENST00000487984 CASC10Q5T4H9 136 aa9.33□□□□□ -0.92
SDC3-204ENST00000487984 LCN12Q6JVE5 192 aa9.33□□□□□ -0.92
SDC3-204ENST00000487984 ADAMTSL5Q6ZMM2 481 aa9.33□□□□□ -0.92
SDC3-204ENST00000487984 DUSP18Q8NEJ0 188 aa9.33□□□□□ -0.92
SDC3-204ENST00000487984 OR6F1Q8NGZ6 308 aa9.33□□□□□ -0.92
SDC3-204ENST00000487984 FYTTD1Q96QD9 318 aaKnown RBP9.33□□□□□ -0.92
SDC3-204ENST00000487984 SLC2A9Q9NRM0 540 aa9.33□□□□□ -0.92
SDC3-204ENST00000487984 SLC2A8Q9NY64 477 aa9.33□□□□□ -0.92
SDC3-204ENST00000487984 EHFQ9NZC4 300 aa9.33□□□□□ -0.92
SDC3-204ENST00000487984 PEMTQ9UBM1 199 aa9.33□□□□□ -0.92
SDC3-204ENST00000487984 DMRT1Q9Y5R6 373 aa9.33□□□□□ -0.92
SDC3-204ENST00000487984 PPP5D1E7EU14 171 aa9.32□□□□□ -0.92
SDC3-204ENST00000487984 HRASP01112 189 aa9.32□□□□□ -0.92
SDC3-204ENST00000487984 MYOD1P15172 320 aa9.32□□□□□ -0.92
SDC3-204ENST00000487984 AREGP15514 252 aa9.32□□□□□ -0.92
SDC3-204ENST00000487984 RFX2P48378 723 aa9.32□□□□□ -0.92
SDC3-204ENST00000487984 RPL8P62917 257 aaKnown RBP9.32□□□□□ -0.92
SDC3-204ENST00000487984 RBMS2Q15434 407 aaKnown RBP9.32□□□□□ -0.92
SDC3-204ENST00000487984 SCGB2B2Q4G0G5 96 aa9.32□□□□□ -0.92
SDC3-204ENST00000487984 NRARPQ7Z6K4 114 aa9.32□□□□□ -0.92
SDC3-204ENST00000487984 GTSCR1Q86UQ5 136 aa9.32□□□□□ -0.92
SDC3-204ENST00000487984 SPAG16Q8N0X2 631 aa9.32□□□□□ -0.92
SDC3-204ENST00000487984 CENPSQ8N2Z9 138 aa9.32□□□□□ -0.92
SDC3-204ENST00000487984 OR51S1Q8NGJ8 323 aa9.32□□□□□ -0.92
SDC3-204ENST00000487984 OR2K2Q8NGT1 345 aa9.32□□□□□ -0.92
SDC3-204ENST00000487984 FANCD2OSQ96PS1 177 aa9.32□□□□□ -0.92
SDC3-204ENST00000487984 CITED4Q96RK1 184 aa9.32□□□□□ -0.92
SDC3-204ENST00000487984 SLC5A7Q9GZV3 580 aa9.32□□□□□ -0.92
SDC3-204ENST00000487984 FBXL7Q9UJT9 491 aa9.32□□□□□ -0.92
SDC3-204ENST00000487984 RBFOX2O43251 390 aaKnown RBP eCLIP9.31□□□□□ -0.92
SDC3-204ENST00000487984 NDUFB8O95169 186 aa9.31□□□□□ -0.92
SDC3-204ENST00000487984 IGHV3-23P01764 117 aa9.31□□□□□ -0.92
SDC3-204ENST00000487984 HLA-AP01891 365 aaKnown RBP9.31□□□□□ -0.92
SDC3-204ENST00000487984 TCRBP04435 133 aa9.31□□□□□ -0.92
SDC3-204ENST00000487984 CRYGCP07315 174 aa9.31□□□□□ -0.92
SDC3-204ENST00000487984 HLA-GP17693 338 aa9.31□□□□□ -0.92
SDC3-204ENST00000487984 PSMB6P28072 239 aa9.31□□□□□ -0.92
SDC3-204ENST00000487984 FXYD4P59646 89 aa9.31□□□□□ -0.92
SDC3-204ENST00000487984 HERV-K104P61576 105 aa9.31□□□□□ -0.92
SDC3-204ENST00000487984 CD300EQ496F6 205 aaPredicted RBP9.31□□□□□ -0.92
SDC3-204ENST00000487984 FAM209BQ5JX69 171 aa9.31□□□□□ -0.92
SDC3-204ENST00000487984 OR4A47Q6IF82 309 aa9.31□□□□□ -0.92
SDC3-204ENST00000487984 ZNF818PQ6ZRF7 136 aa9.31□□□□□ -0.92
SDC3-204ENST00000487984 ZBTB34Q8NCN2 500 aa9.31□□□□□ -0.92
SDC3-204ENST00000487984 TERB2Q8NHR7 220 aa9.31□□□□□ -0.92
SDC3-204ENST00000487984 GIMAP1Q8WWP7 306 aa9.31□□□□□ -0.92
SDC3-204ENST00000487984 CCDC140Q96MF4 163 aa9.31□□□□□ -0.92
SDC3-204ENST00000487984 BET1LQ9NYM9 111 aa9.31□□□□□ -0.92
SDC3-204ENST00000487984 CGB1A6NKQ9 187 aa9.3□□□□□ -0.92
SDC3-204ENST00000487984 GGCTO75223 188 aaKnown RBP9.3□□□□□ -0.92
SDC3-204ENST00000487984 NDUFB6O95139 128 aa9.3□□□□□ -0.92
SDC3-204ENST00000487984 OR2C1O95371 312 aa9.3□□□□□ -0.92
SDC3-204ENST00000487984 DHFRP00374 187 aa9.3□□□□□ -0.92
SDC3-204ENST00000487984 REG1AP05451 166 aa9.3□□□□□ -0.92
SDC3-204ENST00000487984 LYL1P12980 280 aa9.3□□□□□ -0.92
SDC3-204ENST00000487984 CTRB1P17538 263 aa9.3□□□□□ -0.92
SDC3-204ENST00000487984 EDN2P20800 178 aa9.3□□□□□ -0.92
SDC3-204ENST00000487984 TAS2R31P59538 309 aa9.3□□□□□ -0.92
SDC3-204ENST00000487984 SURF2Q15527 256 aaPredicted RBP9.3□□□□□ -0.92
SDC3-204ENST00000487984 HAGHQ16775 308 aa9.3□□□□□ -0.92
SDC3-204ENST00000487984 KLK9Q2XQG4 91 aa9.3□□□□□ -0.92
SDC3-204ENST00000487984 CTRB2Q6GPI1 263 aa9.3□□□□□ -0.92
SDC3-204ENST00000487984 FAAP20Q6NZ36 180 aa9.3□□□□□ -0.92
SDC3-204ENST00000487984 LPCAT3Q6P1A2 487 aa9.3□□□□□ -0.92
SDC3-204ENST00000487984 DHRS11Q6UWP2 260 aa9.3□□□□□ -0.92
SDC3-204ENST00000487984 OR4D10Q8NGI6 311 aa9.3□□□□□ -0.92
SDC3-204ENST00000487984 OR4A5Q8NH83 315 aa9.3□□□□□ -0.92
SDC3-204ENST00000487984 ZNF2Q9BSG1 426 aaPredicted RBP9.3□□□□□ -0.92
SDC3-204ENST00000487984 TUBA4BQ9H853 241 aa9.3□□□□□ -0.92
SDC3-204ENST00000487984 KLK9Q9UKQ9 250 aa9.3□□□□□ -0.92
SDC3-204ENST00000487984 S4R3C0 116 aa9.3□□□□□ -0.92
SDC3-204ENST00000487984 DYNC2H1Q8NCM8 4307 aaKnown RBP9.29□□□□□ -0.92
SDC3-204ENST00000487984 CSMD3Q7Z407 3707 aa9.29□□□□□ -0.92
SDC3-204ENST00000487984 TRAV3A0A0B4J244 114 aa9.29□□□□□ -0.92
SDC3-204ENST00000487984 C2orf70A6NJV1 201 aa9.29□□□□□ -0.92
SDC3-204ENST00000487984 HPRT1P00492 218 aa9.29□□□□□ -0.92
SDC3-204ENST00000487984 H2AFB2P0C5Z0 115 aa9.29□□□□□ -0.92
SDC3-204ENST00000487984 FOLR2P14207 255 aa9.29□□□□□ -0.92
SDC3-204ENST00000487984 NQO2P16083 231 aa9.29□□□□□ -0.92
SDC3-204ENST00000487984 S100GP29377 79 aa9.29□□□□□ -0.92
SDC3-204ENST00000487984 BTCP35070 178 aa9.29□□□□□ -0.92
SDC3-204ENST00000487984 ARL3P36405 182 aa9.29□□□□□ -0.92
SDC3-204ENST00000487984 CCR6P51684 374 aa9.29□□□□□ -0.92
SDC3-204ENST00000487984 OR2B8PP59922 312 aa9.29□□□□□ -0.92
SDC3-204ENST00000487984 CATR1Q13166 79 aa9.29□□□□□ -0.92
SDC3-204ENST00000487984 POU2AF1Q16633 256 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms