RNA–Protein interactions for RNA: ENST00000487890.5

GPNMB-212, Transcript of glycoprotein nmb, humanhuman

TSL 5

Gene GPNMB, Length 577 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-212ENST00000487890 Q6ZR03 302 aa2.43□□□□□ -2.02
GPNMB-212ENST00000487890 TMEM144Q7Z5S9 345 aa2.43□□□□□ -2.02
GPNMB-212ENST00000487890 APRG1Q8IVJ8 170 aa2.43□□□□□ -2.02
GPNMB-212ENST00000487890 C1orf174Q8IYL3 243 aa2.43□□□□□ -2.02
GPNMB-212ENST00000487890 DEFB107AQ8IZN7 70 aa2.43□□□□□ -2.02
GPNMB-212ENST00000487890 ZNF561Q8N587 486 aa2.43□□□□□ -2.02
GPNMB-212ENST00000487890 ZNF283Q8N7M2 679 aa2.43□□□□□ -2.02
GPNMB-212ENST00000487890 SIGLECL1Q8N7X8 197 aa2.43□□□□□ -2.02
GPNMB-212ENST00000487890 ZNF738Q8NE65 137 aa2.43□□□□□ -2.02
GPNMB-212ENST00000487890 CCDC54Q8NEL0 328 aa2.43□□□□□ -2.02
GPNMB-212ENST00000487890 DEFB108BQ8NET1 73 aa2.43□□□□□ -2.02
GPNMB-212ENST00000487890 OR10W1Q8NGF6 305 aa2.43□□□□□ -2.02
GPNMB-212ENST00000487890 OR8B3Q8NGG8 313 aa2.43□□□□□ -2.02
GPNMB-212ENST00000487890 OR52E2Q8NGJ4 325 aa2.43□□□□□ -2.02
GPNMB-212ENST00000487890 OR9Q1Q8NGQ5 310 aa2.43□□□□□ -2.02
GPNMB-212ENST00000487890 OR6K6Q8NGW6 343 aa2.43□□□□□ -2.02
GPNMB-212ENST00000487890 OR13G1Q8NGZ3 307 aa2.43□□□□□ -2.02
GPNMB-212ENST00000487890 TYMSOSQ8TAI1 123 aa2.43□□□□□ -2.02
GPNMB-212ENST00000487890 ZNF420Q8TAQ5 688 aaPredicted RBP2.43□□□□□ -2.02
GPNMB-212ENST00000487890 GNPDA2Q8TDQ7 276 aa2.43□□□□□ -2.02
GPNMB-212ENST00000487890 SPTSSAQ969W0 71 aa2.43□□□□□ -2.02
GPNMB-212ENST00000487890 APOBEC3DQ96AK3 386 aaPredicted RBP2.43□□□□□ -2.02
GPNMB-212ENST00000487890 RPUSD4Q96CM3 377 aaKnown RBP2.43□□□□□ -2.02
GPNMB-212ENST00000487890 YIPF6Q96EC8 236 aa2.43□□□□□ -2.02
GPNMB-212ENST00000487890 PYURFQ96I23 114 aa2.43□□□□□ -2.02
GPNMB-212ENST00000487890 OR8B2Q96RD0 313 aa2.43□□□□□ -2.02
GPNMB-212ENST00000487890 NMNAT3Q96T66 252 aa2.43□□□□□ -2.02
GPNMB-212ENST00000487890 ZNF2Q9BSG1 426 aaPredicted RBP2.43□□□□□ -2.02
GPNMB-212ENST00000487890 ADAT1Q9BUB4 502 aaKnown RBP2.43□□□□□ -2.02
GPNMB-212ENST00000487890 PAXXQ9BUH6 204 aa2.43□□□□□ -2.02
GPNMB-212ENST00000487890 OR52D1Q9H346 318 aa2.43□□□□□ -2.02
GPNMB-212ENST00000487890 MMP26Q9NRE1 261 aa2.43□□□□□ -2.02
GPNMB-212ENST00000487890 TMEM100Q9NV29 134 aa2.43□□□□□ -2.02
GPNMB-212ENST00000487890 SDHAF2Q9NX18 166 aa2.43□□□□□ -2.02
GPNMB-212ENST00000487890 BABAM2Q9NXR7 383 aa2.43□□□□□ -2.02
GPNMB-212ENST00000487890 DNAJC27Q9NZQ0 273 aa2.43□□□□□ -2.02
GPNMB-212ENST00000487890 SIGLEC7Q9Y286 467 aa2.43□□□□□ -2.02
GPNMB-212ENST00000487890 GOLT1BQ9Y3E0 138 aa2.43□□□□□ -2.02
GPNMB-212ENST00000487890 LHFPL6Q9Y693 200 aa2.43□□□□□ -2.02
GPNMB-212ENST00000487890 PLXNB1O43157 2135 aa2.42□□□□□ -2.02
GPNMB-212ENST00000487890 IGLV1-36A0A0B4J1U3 117 aa2.42□□□□□ -2.02
GPNMB-212ENST00000487890 TRAV40A0A0B4J280 105 aa2.42□□□□□ -2.02
GPNMB-212ENST00000487890 PSMB11A5LHX3 300 aa2.42□□□□□ -2.02
GPNMB-212ENST00000487890 RIIAD1A6NNX1 92 aa2.42□□□□□ -2.02
GPNMB-212ENST00000487890 IQCF6A8MYZ5 107 aa2.42□□□□□ -2.02
GPNMB-212ENST00000487890 F5H768 121 aa2.42□□□□□ -2.02
GPNMB-212ENST00000487890 M0R135 149 aa2.42□□□□□ -2.02
GPNMB-212ENST00000487890 TNFRSF11BO00300 401 aa2.42□□□□□ -2.02
GPNMB-212ENST00000487890 GNGT2O14610 69 aa2.42□□□□□ -2.02
GPNMB-212ENST00000487890 HSBP1O75506 76 aa2.42□□□□□ -2.02
GPNMB-212ENST00000487890 SERF1AO75920 110 aa2.42□□□□□ -2.02
GPNMB-212ENST00000487890 DCTN3O75935 186 aa2.42□□□□□ -2.02
GPNMB-212ENST00000487890 IFNGP01579 166 aa2.42□□□□□ -2.02
GPNMB-212ENST00000487890 CRYBA1P05813 215 aa2.42□□□□□ -2.02
GPNMB-212ENST00000487890 FMO3P31513 532 aa2.42□□□□□ -2.02
GPNMB-212ENST00000487890 PMELP40967 661 aa2.42□□□□□ -2.02
GPNMB-212ENST00000487890 RPS27P42677 84 aaKnown RBP2.42□□□□□ -2.02
GPNMB-212ENST00000487890 SUB1P53999 127 aaKnown RBP eCLIP2.42□□□□□ -2.02
GPNMB-212ENST00000487890 APOC4P55056 127 aa2.42□□□□□ -2.02
GPNMB-212ENST00000487890 FXYD6P3P58550 94 aa2.42□□□□□ -2.02
GPNMB-212ENST00000487890 ESRRGP62508 458 aa2.42□□□□□ -2.02
GPNMB-212ENST00000487890 UBA52P62987 128 aaKnown RBP2.42□□□□□ -2.02
GPNMB-212ENST00000487890 RPL19P84098 196 aaKnown RBP2.42□□□□□ -2.02
GPNMB-212ENST00000487890 MED21Q13503 144 aa2.42□□□□□ -2.02
GPNMB-212ENST00000487890 FCN2Q15485 313 aa2.42□□□□□ -2.02
GPNMB-212ENST00000487890 KCNJ8Q15842 424 aa2.42□□□□□ -2.02
GPNMB-212ENST00000487890 RPEL1Q2QD12 228 aa2.42□□□□□ -2.02
GPNMB-212ENST00000487890 TMEM155Q4W5P6 130 aa2.42□□□□□ -2.02
GPNMB-212ENST00000487890 GFI1BQ5VTD9 330 aa2.42□□□□□ -2.02
GPNMB-212ENST00000487890 KRTAP5-3Q6L8H2 238 aa2.42□□□□□ -2.02
GPNMB-212ENST00000487890 RPL13AP3Q6NVV1 102 aa2.42□□□□□ -2.02
GPNMB-212ENST00000487890 ZFP1Q6P2D0 407 aa2.42□□□□□ -2.02
GPNMB-212ENST00000487890 FAHD1Q6P587 224 aa2.42□□□□□ -2.02
GPNMB-212ENST00000487890 FBXW12Q6X9E4 464 aa2.42□□□□□ -2.02
GPNMB-212ENST00000487890 Q6ZTC4 211 aa2.42□□□□□ -2.02
GPNMB-212ENST00000487890 LINC00336Q6ZUF6 198 aa2.42□□□□□ -2.02
GPNMB-212ENST00000487890 LRRC28Q86X40 367 aaPredicted RBP2.42□□□□□ -2.02
GPNMB-212ENST00000487890 OR6V1Q8N148 313 aa2.42□□□□□ -2.02
GPNMB-212ENST00000487890 SLC26A10Q8NG04 563 aa2.42□□□□□ -2.02
GPNMB-212ENST00000487890 OR8G5Q8NG78 346 aa2.42□□□□□ -2.02
GPNMB-212ENST00000487890 OR6N2Q8NGY6 317 aa2.42□□□□□ -2.02
GPNMB-212ENST00000487890 OR2T4Q8NH00 348 aa2.42□□□□□ -2.02
GPNMB-212ENST00000487890 OR8S1Q8NH09 359 aa2.42□□□□□ -2.02
GPNMB-212ENST00000487890 OR2AE1Q8NHA4 323 aa2.42□□□□□ -2.02
GPNMB-212ENST00000487890 RHOXF1Q8NHV9 184 aa2.42□□□□□ -2.02
GPNMB-212ENST00000487890 POP5Q969H6 163 aaKnown RBP2.42□□□□□ -2.02
GPNMB-212ENST00000487890 RPEQ96AT9 228 aa2.42□□□□□ -2.02
GPNMB-212ENST00000487890 ZMYND19Q96E35 227 aaPredicted RBP2.42□□□□□ -2.02
GPNMB-212ENST00000487890 MRPL48Q96GC5 212 aaKnown RBP2.42□□□□□ -2.02
GPNMB-212ENST00000487890 ZNF799Q96GE5 643 aa2.42□□□□□ -2.02
GPNMB-212ENST00000487890 TMEM56Q96MV1 263 aa2.42□□□□□ -2.02
GPNMB-212ENST00000487890 GPX7Q96SL4 187 aaPredicted RBP2.42□□□□□ -2.02
GPNMB-212ENST00000487890 PFDN5Q99471 154 aa2.42□□□□□ -2.02
GPNMB-212ENST00000487890 TSSK6Q9BXA6 273 aa2.42□□□□□ -2.02
GPNMB-212ENST00000487890 PLA2G12AQ9BZM1 189 aa2.42□□□□□ -2.02
GPNMB-212ENST00000487890 REEP1Q9H902 201 aa2.42□□□□□ -2.02
GPNMB-212ENST00000487890 PATZ1Q9HBE1 687 aaKnown RBP2.42□□□□□ -2.02
GPNMB-212ENST00000487890 VCX3AQ9NNX9 186 aa2.42□□□□□ -2.02
GPNMB-212ENST00000487890 ZC4H2Q9NQZ6 224 aa2.42□□□□□ -2.02
GPNMB-212ENST00000487890 GSKIPQ9P0R6 139 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms