RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 C8orf4Q9NR00 106 aa1.54□□□□□ -2.16
HMGB1P36-201ENST00000487709 BATF3Q9NR55 127 aa1.54□□□□□ -2.16
HMGB1P36-201ENST00000487709 CISHQ9NSE2 258 aa1.54□□□□□ -2.16
HMGB1P36-201ENST00000487709 C14orf105Q9NVL8 296 aa1.54□□□□□ -2.16
HMGB1P36-201ENST00000487709 CMTM6Q9NX76 183 aa1.54□□□□□ -2.16
HMGB1P36-201ENST00000487709 TAAR3PQ9P1P4 343 aa1.54□□□□□ -2.16
HMGB1P36-201ENST00000487709 UFC1Q9Y3C8 167 aa1.54□□□□□ -2.16
HMGB1P36-201ENST00000487709 OR51B4Q9Y5P0 310 aa1.54□□□□□ -2.16
HMGB1P36-201ENST00000487709 RTL1A6NKG5 1358 aa1.54□□□□□ -2.16
HMGB1P36-201ENST00000487709 MTUS2Q5JR59 1369 aa1.54□□□□□ -2.16
HMGB1P36-201ENST00000487709 LCTP09848 1927 aa1.54□□□□□ -2.16
HMGB1P36-201ENST00000487709 EXOC1LA0A1B0GW35 172 aa1.53□□□□□ -2.16
HMGB1P36-201ENST00000487709 PIRO00625 290 aa1.53□□□□□ -2.16
HMGB1P36-201ENST00000487709 COX7A2LO14548 114 aa1.53□□□□□ -2.16
HMGB1P36-201ENST00000487709 PFDN1O60925 122 aa1.53□□□□□ -2.16
HMGB1P36-201ENST00000487709 NUP155O75694 1391 aa1.53□□□□□ -2.16
HMGB1P36-201ENST00000487709 CRHP06850 196 aa1.53□□□□□ -2.16
HMGB1P36-201ENST00000487709 RBP1P09455 135 aa1.53□□□□□ -2.16
HMGB1P36-201ENST00000487709 UCHL1P09936 223 aa1.53□□□□□ -2.16
HMGB1P36-201ENST00000487709 ZNF705DP0CH99 300 aaPredicted RBP1.53□□□□□ -2.16
HMGB1P36-201ENST00000487709 IDO1P14902 403 aa1.53□□□□□ -2.16
HMGB1P36-201ENST00000487709 CRHBPP24387 322 aa1.53□□□□□ -2.16
HMGB1P36-201ENST00000487709 ERP29P30040 261 aaKnown RBP1.53□□□□□ -2.16
HMGB1P36-201ENST00000487709 RAB4BP61018 213 aa1.53□□□□□ -2.16
HMGB1P36-201ENST00000487709 TBPL1P62380 186 aa1.53□□□□□ -2.16
HMGB1P36-201ENST00000487709 GNG3P63215 75 aa1.53□□□□□ -2.16
HMGB1P36-201ENST00000487709 TNFAIP6P98066 277 aaPredicted RBP1.53□□□□□ -2.16
HMGB1P36-201ENST00000487709 RUNX1Q01196 453 aa1.53□□□□□ -2.16
HMGB1P36-201ENST00000487709 FOXF1Q12946 379 aa1.53□□□□□ -2.16
HMGB1P36-201ENST00000487709 MOGQ16653 247 aa1.53□□□□□ -2.16
HMGB1P36-201ENST00000487709 AKR1C8PQ5T2L2 129 aa1.53□□□□□ -2.16
HMGB1P36-201ENST00000487709 CAMSAP1Q5T5Y3 1602 aa1.53□□□□□ -2.16
HMGB1P36-201ENST00000487709 GOLT1AQ6ZVE7 132 aa1.53□□□□□ -2.16
HMGB1P36-201ENST00000487709 STX19Q8N4C7 294 aa1.53□□□□□ -2.16
HMGB1P36-201ENST00000487709 OR11H6Q8NGC7 330 aa1.53□□□□□ -2.16
HMGB1P36-201ENST00000487709 OR4X2Q8NGF9 303 aa1.53□□□□□ -2.16
HMGB1P36-201ENST00000487709 TSPAN32Q96QS1 320 aa1.53□□□□□ -2.16
HMGB1P36-201ENST00000487709 NMNAT3Q96T66 252 aa1.53□□□□□ -2.16
HMGB1P36-201ENST00000487709 GPER1Q99527 375 aa1.53□□□□□ -2.16
HMGB1P36-201ENST00000487709 GINS3Q9BRX5 216 aa1.53□□□□□ -2.16
HMGB1P36-201ENST00000487709 UPK3BQ9BT76 320 aa1.53□□□□□ -2.16
HMGB1P36-201ENST00000487709 UQCC1Q9NVA1 299 aa1.53□□□□□ -2.16
HMGB1P36-201ENST00000487709 SMPXQ9UHP9 88 aa1.53□□□□□ -2.16
HMGB1P36-201ENST00000487709 MYO5BQ9ULV0 1848 aa1.53□□□□□ -2.16
HMGB1P36-201ENST00000487709 COQ4Q9Y3A0 265 aa1.53□□□□□ -2.16
HMGB1P36-201ENST00000487709 TMEM56-RWDD3S4R434 201 aa1.53□□□□□ -2.16
HMGB1P36-201ENST00000487709 FHAD1B1AJZ9 1412 aa1.52□□□□□ -2.17
HMGB1P36-201ENST00000487709 TRBV20OR9-2A0A075B6H5 130 aa1.52□□□□□ -2.17
HMGB1P36-201ENST00000487709 hCG_1818297A0A087WSY0 165 aa1.52□□□□□ -2.17
HMGB1P36-201ENST00000487709 IGHV3-15A0A0B4J1V0 119 aa1.52□□□□□ -2.17
HMGB1P36-201ENST00000487709 C19orf71A6NCJ1 209 aa1.52□□□□□ -2.17
HMGB1P36-201ENST00000487709 A8MT66 165 aa1.52□□□□□ -2.17
HMGB1P36-201ENST00000487709 OR11H12B2RN74 326 aa1.52□□□□□ -2.17
HMGB1P36-201ENST00000487709 C9JCJ5 164 aa1.52□□□□□ -2.17
HMGB1P36-201ENST00000487709 G3V2T6 193 aa1.52□□□□□ -2.17
HMGB1P36-201ENST00000487709 TSTD3H0UI37 97 aa1.52□□□□□ -2.17
HMGB1P36-201ENST00000487709 LST1O00453 97 aa1.52□□□□□ -2.17
HMGB1P36-201ENST00000487709 HMGB3O15347 200 aaKnown RBP1.52□□□□□ -2.17
HMGB1P36-201ENST00000487709 NDUFC2O95298 119 aa1.52□□□□□ -2.17
HMGB1P36-201ENST00000487709 IFNA14P01570 189 aa1.52□□□□□ -2.17
HMGB1P36-201ENST00000487709 IGHV1-69P01742 117 aa1.52□□□□□ -2.17
HMGB1P36-201ENST00000487709 C8GP07360 202 aa1.52□□□□□ -2.17
HMGB1P36-201ENST00000487709 SRP19P09132 144 aaKnown RBP1.52□□□□□ -2.17
HMGB1P36-201ENST00000487709 CYBAP13498 195 aa1.52□□□□□ -2.17
HMGB1P36-201ENST00000487709 PPIBP23284 216 aaKnown RBP1.52□□□□□ -2.17
HMGB1P36-201ENST00000487709 RAB13P51153 203 aa1.52□□□□□ -2.17
HMGB1P36-201ENST00000487709 RPS20P60866 119 aaKnown RBP1.52□□□□□ -2.17
HMGB1P36-201ENST00000487709 FKBP1AP62942 108 aaKnown RBP1.52□□□□□ -2.17
HMGB1P36-201ENST00000487709 DEFB103AP81534 67 aa1.52□□□□□ -2.17
HMGB1P36-201ENST00000487709 C12orf74Q32Q52 190 aa1.52□□□□□ -2.17
HMGB1P36-201ENST00000487709 FAM229BQ4G0N7 80 aa1.52□□□□□ -2.17
HMGB1P36-201ENST00000487709 PABPC1L2AQ5JQF8 200 aa1.52□□□□□ -2.17
HMGB1P36-201ENST00000487709 C9orf64Q5T6V5 341 aa1.52□□□□□ -2.17
HMGB1P36-201ENST00000487709 AGTRAPQ6RW13 159 aa1.52□□□□□ -2.17
HMGB1P36-201ENST00000487709 Q6ZS49 121 aa1.52□□□□□ -2.17
HMGB1P36-201ENST00000487709 GRINAQ7Z429 371 aa1.52□□□□□ -2.17
HMGB1P36-201ENST00000487709 SMIM20Q8N5G0 67 aa1.52□□□□□ -2.17
HMGB1P36-201ENST00000487709 ZNF439Q8NDP4 499 aa1.52□□□□□ -2.17
HMGB1P36-201ENST00000487709 OR11H2Q8NH07 326 aa1.52□□□□□ -2.17
HMGB1P36-201ENST00000487709 SGMS2Q8NHU3 365 aa1.52□□□□□ -2.17
HMGB1P36-201ENST00000487709 RNASE11Q8TAA1 199 aaKnown RBP1.52□□□□□ -2.17
HMGB1P36-201ENST00000487709 MRPL30Q8TCC3 161 aaKnown RBP1.52□□□□□ -2.17
HMGB1P36-201ENST00000487709 KLK6Q92876 244 aa1.52□□□□□ -2.17
HMGB1P36-201ENST00000487709 GPR146Q96CH1 333 aa1.52□□□□□ -2.17
HMGB1P36-201ENST00000487709 TMEM70Q9BUB7 260 aa1.52□□□□□ -2.17
HMGB1P36-201ENST00000487709 PBDC1Q9BVG4 233 aa1.52□□□□□ -2.17
HMGB1P36-201ENST00000487709 RNASE7Q9H1E1 156 aaKnown RBP1.52□□□□□ -2.17
HMGB1P36-201ENST00000487709 CXCL16Q9H2A7 254 aa1.52□□□□□ -2.17
HMGB1P36-201ENST00000487709 C11orf1Q9H5F2 150 aa1.52□□□□□ -2.17
HMGB1P36-201ENST00000487709 PARVBQ9HBI1 364 aa1.52□□□□□ -2.17
HMGB1P36-201ENST00000487709 DOCK10Q96BY6 2186 aa1.52□□□□□ -2.17
HMGB1P36-201ENST00000487709 MPDZO75970 2070 aa1.52□□□□□ -2.17
HMGB1P36-201ENST00000487709 MUC21A0A0G2JKD1 596 aa1.51□□□□□ -2.17
HMGB1P36-201ENST00000487709 A0A0J9YY10 115 aa1.51□□□□□ -2.17
HMGB1P36-201ENST00000487709 MUC21A0A140T8X8 626 aa1.51□□□□□ -2.17
HMGB1P36-201ENST00000487709 A0A1B0GX78 115 aa1.51□□□□□ -2.17
HMGB1P36-201ENST00000487709 TRAPPC13A5PLN9 417 aa1.51□□□□□ -2.17
HMGB1P36-201ENST00000487709 SIGLEC16A6NMB1 481 aa1.51□□□□□ -2.17
HMGB1P36-201ENST00000487709 A8MUN3 132 aa1.51□□□□□ -2.17
HMGB1P36-201ENST00000487709 AIPO00170 330 aa1.51□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms