RNA–Protein interactions for RNA: ENST00000487615.5

TRA2B-214, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,485 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-214ENST00000487615 LMO1P25800 156 aa9.81□□□□□ -0.84
TRA2B-214ENST00000487615 HTR1DP28221 377 aa9.81□□□□□ -0.84
TRA2B-214ENST00000487615 ZNF585BQ52M93 769 aa9.81□□□□□ -0.84
TRA2B-214ENST00000487615 OR1L6Q8NGR2 347 aa9.81□□□□□ -0.84
TRA2B-214ENST00000487615 TXN2Q99757 166 aa9.81□□□□□ -0.84
TRA2B-214ENST00000487615 WDR83OSQ9Y284 106 aa9.81□□□□□ -0.84
TRA2B-214ENST00000487615 HTTP42858 3142 aa9.81□□□□□ -0.84
TRA2B-214ENST00000487615 IGKV1D-17A0A075B6S4 117 aa9.81□□□□□ -0.84
TRA2B-214ENST00000487615 TRAV1-1A0A0B4J248 108 aa9.81□□□□□ -0.84
TRA2B-214ENST00000487615 TRAV20A0A0B4J274 112 aa9.81□□□□□ -0.84
TRA2B-214ENST00000487615 A0A1B0GW64 132 aa9.81□□□□□ -0.84
TRA2B-214ENST00000487615 IER3P46695 156 aa9.81□□□□□ -0.84
TRA2B-214ENST00000487615 NPIPB3Q92617 1050 aa9.81□□□□□ -0.84
TRA2B-214ENST00000487615 TRBV23-1A0A0A0MS06 115 aa9.81□□□□□ -0.84
TRA2B-214ENST00000487615 PLAUP00749 431 aa9.81□□□□□ -0.84
TRA2B-214ENST00000487615 IGFBP2P18065 325 aa9.81□□□□□ -0.84
TRA2B-214ENST00000487615 CCKARP32238 428 aa9.81□□□□□ -0.84
TRA2B-214ENST00000487615 CAMPP49913 170 aa9.81□□□□□ -0.84
TRA2B-214ENST00000487615 MRPL54Q6P161 138 aaKnown RBP9.81□□□□□ -0.84
TRA2B-214ENST00000487615 CYYR1Q96J86 154 aa9.81□□□□□ -0.84
TRA2B-214ENST00000487615 IFI27L2Q9H2X8 130 aa9.81□□□□□ -0.84
TRA2B-214ENST00000487615 EML6Q6ZMW3 1958 aa9.81□□□□□ -0.84
TRA2B-214ENST00000487615 ZNF785A8K8V0 405 aa9.8□□□□□ -0.84
TRA2B-214ENST00000487615 LIPFP07098 398 aa9.8□□□□□ -0.84
TRA2B-214ENST00000487615 SNRPCP09234 159 aaKnown RBP9.8□□□□□ -0.84
TRA2B-214ENST00000487615 TOMM20LQ6UXN7 152 aa9.8□□□□□ -0.84
TRA2B-214ENST00000487615 AP1S3Q96PC3 154 aa9.8□□□□□ -0.84
TRA2B-214ENST00000487615 RPUSD1Q9UJJ7 312 aaKnown RBP9.8□□□□□ -0.84
TRA2B-214ENST00000487615 BDP1A6H8Y1 2624 aa9.8□□□□□ -0.84
TRA2B-214ENST00000487615 LINC00473A8K010 186 aa9.8□□□□□ -0.84
TRA2B-214ENST00000487615 COMPP49747 757 aaPredicted RBP9.8□□□□□ -0.84
TRA2B-214ENST00000487615 ARF6P62330 175 aa9.8□□□□□ -0.84
TRA2B-214ENST00000487615 OR5I1Q13606 314 aa9.8□□□□□ -0.84
TRA2B-214ENST00000487615 OR52E5Q8NH55 327 aa9.8□□□□□ -0.84
TRA2B-214ENST00000487615 HIGD1AQ9Y241 93 aa9.8□□□□□ -0.84
TRA2B-214ENST00000487615 NUP210LQ5VU65 1888 aa9.8□□□□□ -0.84
TRA2B-214ENST00000487615 A0A1W2PNU3 283 aaPredicted RBP9.8□□□□□ -0.84
TRA2B-214ENST00000487615 UPK2O00526 184 aa9.8□□□□□ -0.84
TRA2B-214ENST00000487615 REG1AP05451 166 aa9.8□□□□□ -0.84
TRA2B-214ENST00000487615 HIST1H1BP16401 226 aaKnown RBP9.8□□□□□ -0.84
TRA2B-214ENST00000487615 TMEM11P17152 192 aa9.8□□□□□ -0.84
TRA2B-214ENST00000487615 Q8WTZ3 238 aa9.8□□□□□ -0.84
TRA2B-214ENST00000487615 TMUB1Q9BVT8 246 aa9.8□□□□□ -0.84
TRA2B-214ENST00000487615 AKAP6Q13023 2319 aa9.8□□□□□ -0.84
TRA2B-214ENST00000487615 ZNF253O75346 499 aa9.8□□□□□ -0.84
TRA2B-214ENST00000487615 TNFSF13O75888 250 aa9.8□□□□□ -0.84
TRA2B-214ENST00000487615 IGHV3-48P01763 117 aa9.8□□□□□ -0.84
TRA2B-214ENST00000487615 TRGC1P0CF51 173 aa9.8□□□□□ -0.84
TRA2B-214ENST00000487615 SAA1P0DJI8 122 aaPredicted RBP9.8□□□□□ -0.84
TRA2B-214ENST00000487615 CRYBB3P26998 211 aa9.8□□□□□ -0.84
TRA2B-214ENST00000487615 RNASE6Q93091 150 aaKnown RBP9.8□□□□□ -0.84
TRA2B-214ENST00000487615 MRPL32Q9BYC8 188 aaKnown RBP9.8□□□□□ -0.84
TRA2B-214ENST00000487615 PLCE1Q9P212 2302 aa9.79□□□□□ -0.84
TRA2B-214ENST00000487615 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.79□□□□□ -0.84
TRA2B-214ENST00000487615 HIST1H1EP10412 219 aaKnown RBP9.79□□□□□ -0.84
TRA2B-214ENST00000487615 CDX1P47902 265 aaPredicted RBP9.79□□□□□ -0.84
TRA2B-214ENST00000487615 Q6ZR03 302 aa9.79□□□□□ -0.84
TRA2B-214ENST00000487615 WNK2Q9Y3S1 2297 aa9.79□□□□□ -0.84
TRA2B-214ENST00000487615 RRHO14718 337 aa9.79□□□□□ -0.84
TRA2B-214ENST00000487615 TMEM50AO95807 157 aa9.79□□□□□ -0.84
TRA2B-214ENST00000487615 AMTP48728 403 aa9.79□□□□□ -0.84
TRA2B-214ENST00000487615 SNRNP40Q96DI7 357 aaKnown RBP9.79□□□□□ -0.84
TRA2B-214ENST00000487615 VKORC1Q9BQB6 163 aa9.79□□□□□ -0.84
TRA2B-214ENST00000487615 PRO1933Q9H354 126 aa9.79□□□□□ -0.84
TRA2B-214ENST00000487615 OTOGLQ3ZCN5 2332 aa9.79□□□□□ -0.84
TRA2B-214ENST00000487615 H0Y8G0 127 aa9.79□□□□□ -0.84
TRA2B-214ENST00000487615 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.79□□□□□ -0.84
TRA2B-214ENST00000487615 P01737 135 aa9.79□□□□□ -0.84
TRA2B-214ENST00000487615 PAX6P26367 422 aa9.79□□□□□ -0.84
TRA2B-214ENST00000487615 ATP5G3P48201 142 aa9.79□□□□□ -0.84
TRA2B-214ENST00000487615 IGFL3Q6UXB1 125 aa9.79□□□□□ -0.84
TRA2B-214ENST00000487615 TMEM144Q7Z5S9 345 aa9.79□□□□□ -0.84
TRA2B-214ENST00000487615 PNKDQ8N490 385 aa9.79□□□□□ -0.84
TRA2B-214ENST00000487615 FAM222BQ8WU58 562 aa9.79□□□□□ -0.84
TRA2B-214ENST00000487615 NOL4LQ96MY1 436 aaPredicted RBP9.79□□□□□ -0.84
TRA2B-214ENST00000487615 GPR61Q9BZJ8 451 aa9.79□□□□□ -0.84
TRA2B-214ENST00000487615 SRD5A3Q9H8P0 318 aa9.79□□□□□ -0.84
TRA2B-214ENST00000487615 COLCA2A8K830 154 aa9.78□□□□□ -0.84
TRA2B-214ENST00000487615 COL8A1P27658 744 aa9.78□□□□□ -0.84
TRA2B-214ENST00000487615 RPP25LQ8N5L8 163 aaKnown RBP9.78□□□□□ -0.84
TRA2B-214ENST00000487615 SERTM2A0A1B0GWG4 89 aa9.78□□□□□ -0.84
TRA2B-214ENST00000487615 F2RL2O00254 374 aa9.78□□□□□ -0.84
TRA2B-214ENST00000487615 IBA57Q5T440 356 aaKnown RBP9.78□□□□□ -0.84
TRA2B-214ENST00000487615 CACNG8Q8WXS5 425 aa9.78□□□□□ -0.84
TRA2B-214ENST00000487615 FGF23Q9GZV9 251 aaPredicted RBP9.78□□□□□ -0.84
TRA2B-214ENST00000487615 OR51G1Q8NGK1 321 aa9.78□□□□□ -0.84
TRA2B-214ENST00000487615 SFRP2Q96HF1 295 aa9.78□□□□□ -0.84
TRA2B-214ENST00000487615 A0A0G2JNJ9 132 aa9.78□□□□□ -0.84
TRA2B-214ENST00000487615 LINC00205P59089 165 aa9.78□□□□□ -0.84
TRA2B-214ENST00000487615 Q9UFV3 132 aa9.78□□□□□ -0.84
TRA2B-214ENST00000487615 CLEC3BP05452 202 aa9.77□□□□□ -0.85
TRA2B-214ENST00000487615 ARL3P36405 182 aa9.77□□□□□ -0.85
TRA2B-214ENST00000487615 CD81P60033 236 aa9.77□□□□□ -0.85
TRA2B-214ENST00000487615 RPL23P62829 140 aaKnown RBP9.77□□□□□ -0.85
TRA2B-214ENST00000487615 OR8I2Q8N0Y5 310 aa9.77□□□□□ -0.85
TRA2B-214ENST00000487615 RPRMLQ8N4K4 120 aa9.77□□□□□ -0.85
TRA2B-214ENST00000487615 OR51M1Q9H341 326 aa9.77□□□□□ -0.85
TRA2B-214ENST00000487615 CGAP01215 116 aa9.77□□□□□ -0.85
TRA2B-214ENST00000487615 IGLV1-44P01699 117 aa9.77□□□□□ -0.85
TRA2B-214ENST00000487615 PRCDQ00LT1 54 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms