RNA–Protein interactions for RNA: ENST00000487084.1

CDHR3-212, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 834 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-212ENST00000487084 MRGPRFQ96AM1 343 aa17.14■□□□□ 0.33
CDHR3-212ENST00000487084 COPZ2Q9P299 210 aa17.14■□□□□ 0.33
CDHR3-212ENST00000487084 DISC1C4P0D8 188 aa17.13■□□□□ 0.33
CDHR3-212ENST00000487084 PPP5D1E7EU14 171 aa17.13■□□□□ 0.33
CDHR3-212ENST00000487084 SPNP16150 400 aa17.13■□□□□ 0.33
CDHR3-212ENST00000487084 TNFSF8P32971 234 aa17.13■□□□□ 0.33
CDHR3-212ENST00000487084 THOC7Q6I9Y2 204 aaKnown RBP17.13■□□□□ 0.33
CDHR3-212ENST00000487084 H2BFWTQ7Z2G1 175 aa17.13■□□□□ 0.33
CDHR3-212ENST00000487084 OR13C8Q8NGS7 320 aa17.13■□□□□ 0.33
CDHR3-212ENST00000487084 ZFAND1Q8TCF1 268 aa17.13■□□□□ 0.33
CDHR3-212ENST00000487084 MARCH1Q8TCQ1 289 aa17.13■□□□□ 0.33
CDHR3-212ENST00000487084 TSC22D3Q99576 134 aa17.13■□□□□ 0.33
CDHR3-212ENST00000487084 SRSF8Q9BRL6 282 aaKnown RBP17.13■□□□□ 0.33
CDHR3-212ENST00000487084 RSL24D1Q9UHA3 163 aaKnown RBP17.13■□□□□ 0.33
CDHR3-212ENST00000487084 PRNDQ9UKY0 176 aa17.13■□□□□ 0.33
CDHR3-212ENST00000487084 FABP12A6NFH5 140 aa17.12■□□□□ 0.33
CDHR3-212ENST00000487084 IGKV1-39P01597 117 aa17.12■□□□□ 0.33
CDHR3-212ENST00000487084 IGKV1D-39P04432 117 aa17.12■□□□□ 0.33
CDHR3-212ENST00000487084 AKAIN1P0CW23 69 aa17.12■□□□□ 0.33
CDHR3-212ENST00000487084 OR13C7P0DN81 318 aa17.12■□□□□ 0.33
CDHR3-212ENST00000487084 CD69Q07108 199 aa17.12■□□□□ 0.33
CDHR3-212ENST00000487084 FAM209BQ5JX69 171 aa17.12■□□□□ 0.33
CDHR3-212ENST00000487084 CCDC71LQ8N9Z2 235 aa17.12■□□□□ 0.33
CDHR3-212ENST00000487084 OR4C16Q8NGL9 310 aa17.12■□□□□ 0.33
CDHR3-212ENST00000487084 EEF1AKMT3Q96AZ1 226 aa17.12■□□□□ 0.33
CDHR3-212ENST00000487084 SEC22AQ96IW7 307 aa17.12■□□□□ 0.33
CDHR3-212ENST00000487084 NXF2Q9GZY0 626 aaKnown RBP17.12■□□□□ 0.33
CDHR3-212ENST00000487084 IGLV11-55A0A075B6I3 123 aa17.11■□□□□ 0.33
CDHR3-212ENST00000487084 C15orf61A6NNL5 157 aa17.11■□□□□ 0.33
CDHR3-212ENST00000487084 H0Y980 276 aa17.11■□□□□ 0.33
CDHR3-212ENST00000487084 PTBP1P26599 531 aaKnown RBP eCLIP17.11■□□□□ 0.33
CDHR3-212ENST00000487084 MECP2P51608 486 aaKnown RBP17.11■□□□□ 0.33
CDHR3-212ENST00000487084 CLEC19AQ6UXS0 136 aa17.11■□□□□ 0.33
CDHR3-212ENST00000487084 OR4A16Q8NH70 328 aa17.11■□□□□ 0.33
CDHR3-212ENST00000487084 LSM10Q969L4 123 aaKnown RBP17.11■□□□□ 0.33
CDHR3-212ENST00000487084 TP53RKQ96S44 253 aa17.11■□□□□ 0.33
CDHR3-212ENST00000487084 NDUFA4L2Q9NRX3 87 aa17.11■□□□□ 0.33
CDHR3-212ENST00000487084 FKBP11Q9NYL4 201 aa17.11■□□□□ 0.33
CDHR3-212ENST00000487084 C3orf85A0A1B0GTC6 90 aa17.1■□□□□ 0.33
CDHR3-212ENST00000487084 GSTZ1O43708 216 aaPredicted RBP17.1■□□□□ 0.33
CDHR3-212ENST00000487084 HLA-AP01891 365 aaKnown RBP17.1■□□□□ 0.33
CDHR3-212ENST00000487084 WT1-ASQ06250 92 aa17.1■□□□□ 0.33
CDHR3-212ENST00000487084 TRIM16LQ309B1 348 aa17.1■□□□□ 0.33
CDHR3-212ENST00000487084 HSD17B13Q7Z5P4 300 aaPredicted RBP17.1■□□□□ 0.33
CDHR3-212ENST00000487084 CADM3Q8N126 398 aa17.1■□□□□ 0.33
CDHR3-212ENST00000487084 GDPD1Q8N9F7 314 aa17.1■□□□□ 0.33
CDHR3-212ENST00000487084 OR5B3Q8NH48 314 aa17.1■□□□□ 0.33
CDHR3-212ENST00000487084 CCDC140Q96MF4 163 aa17.1■□□□□ 0.33
CDHR3-212ENST00000487084 PEMTQ9UBM1 199 aa17.1■□□□□ 0.33
CDHR3-212ENST00000487084 C14orf166Q9Y224 244 aaKnown RBP17.1■□□□□ 0.33
CDHR3-212ENST00000487084 MFSD2BA6NFX1 497 aa17.09■□□□□ 0.33
CDHR3-212ENST00000487084 DBX1A6NMT0 343 aa17.09■□□□□ 0.33
CDHR3-212ENST00000487084 CYB5BO43169 146 aa17.09■□□□□ 0.33
CDHR3-212ENST00000487084 CTSDP07339 412 aaPredicted RBP17.09■□□□□ 0.33
CDHR3-212ENST00000487084 GP9P14770 177 aa17.09■□□□□ 0.33
CDHR3-212ENST00000487084 ARL3P36405 182 aa17.09■□□□□ 0.33
CDHR3-212ENST00000487084 RBM38Q9H0Z9 239 aaKnown RBP17.09■□□□□ 0.33
CDHR3-212ENST00000487084 TMEM14BQ9NUH8 114 aa17.09■□□□□ 0.33
CDHR3-212ENST00000487084 THYN1Q9P016 225 aa17.09■□□□□ 0.33
CDHR3-212ENST00000487084 LSM4Q9Y4Z0 139 aaKnown RBP17.09■□□□□ 0.33
CDHR3-212ENST00000487084 ANKRD20A5PA0PJZ0 165 aa17.08■□□□□ 0.32
CDHR3-212ENST00000487084 GGCTO75223 188 aaKnown RBP17.08■□□□□ 0.32
CDHR3-212ENST00000487084 S100A5P33763 92 aa17.08■□□□□ 0.32
CDHR3-212ENST00000487084 AKR1C2P52895 323 aa17.08■□□□□ 0.32
CDHR3-212ENST00000487084 KLK9Q2XQG4 91 aa17.08■□□□□ 0.32
CDHR3-212ENST00000487084 SP6Q3SY56 376 aa17.08■□□□□ 0.32
CDHR3-212ENST00000487084 SLC25A24Q6NUK1 477 aa17.08■□□□□ 0.32
CDHR3-212ENST00000487084 IL34Q6ZMJ4 242 aa17.08■□□□□ 0.32
CDHR3-212ENST00000487084 CXorf58Q96LI9 332 aa17.08■□□□□ 0.32
CDHR3-212ENST00000487084 TMEM56Q96MV1 263 aa17.08■□□□□ 0.32
CDHR3-212ENST00000487084 B9D2Q9BPU9 175 aa17.08■□□□□ 0.32
CDHR3-212ENST00000487084 KLK9Q9UKQ9 250 aa17.08■□□□□ 0.32
CDHR3-212ENST00000487084 DMRT1Q9Y5R6 373 aa17.08■□□□□ 0.32
CDHR3-212ENST00000487084 SORL1Q92673 2214 aa17.07■□□□□ 0.32
CDHR3-212ENST00000487084 OR2C1O95371 312 aa17.07■□□□□ 0.32
CDHR3-212ENST00000487084 IGLV1-51P01701 117 aa17.07■□□□□ 0.32
CDHR3-212ENST00000487084 IZUMO4Q1ZYL8 232 aa17.07■□□□□ 0.32
CDHR3-212ENST00000487084 OR51S1Q8NGJ8 323 aa17.07■□□□□ 0.32
CDHR3-212ENST00000487084 PRRT1Q99946 306 aa17.07■□□□□ 0.32
CDHR3-212ENST00000487084 SOSTQ9BQB4 213 aa17.07■□□□□ 0.32
CDHR3-212ENST00000487084 ZC4H2Q9NQZ6 224 aa17.07■□□□□ 0.32
CDHR3-212ENST00000487084 MCUBQ9NWR8 336 aa17.07■□□□□ 0.32
CDHR3-212ENST00000487084 TRBV7-1A0A0A6YYK4 115 aa17.06■□□□□ 0.32
CDHR3-212ENST00000487084 ATG12O94817 140 aa17.06■□□□□ 0.32
CDHR3-212ENST00000487084 CSN3P07498 182 aa17.06■□□□□ 0.32
CDHR3-212ENST00000487084 PYDC2Q56P42 97 aa17.06■□□□□ 0.32
CDHR3-212ENST00000487084 RNASE11Q8TAA1 199 aaKnown RBP17.06■□□□□ 0.32
CDHR3-212ENST00000487084 THAP7Q9BT49 309 aaPredicted RBP17.06■□□□□ 0.32
CDHR3-212ENST00000487084 F11RQ9Y624 299 aaKnown RBP17.06■□□□□ 0.32
CDHR3-212ENST00000487084 SMAD5-AS1Q9Y6J3 95 aa17.06■□□□□ 0.32
CDHR3-212ENST00000487084 IGHV3-21A0A0B4J1V1 117 aa17.05■□□□□ 0.32
CDHR3-212ENST00000487084 TEX13DA0A0J9YY54 714 aaPredicted RBP17.05■□□□□ 0.32
CDHR3-212ENST00000487084 IGKV1-5P01602 117 aa17.05■□□□□ 0.32
CDHR3-212ENST00000487084 CLEC3BP05452 202 aa17.05■□□□□ 0.32
CDHR3-212ENST00000487084 GPR183P32249 361 aa17.05■□□□□ 0.32
CDHR3-212ENST00000487084 SURF2Q15527 256 aaPredicted RBP17.05■□□□□ 0.32
CDHR3-212ENST00000487084 RTBDNQ9BSG5 229 aaPredicted RBP17.05■□□□□ 0.32
CDHR3-212ENST00000487084 OR5AC1P0C628 307 aa17.04■□□□□ 0.32
CDHR3-212ENST00000487084 SPINK9Q5DT21 86 aa17.04■□□□□ 0.32
CDHR3-212ENST00000487084 ZNF502Q8TBZ5 544 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms