RNA–Protein interactions for RNA: ENST00000486983.1

SMARCAL1-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 2

Gene SMARCAL1, Length 793 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-212ENST00000486983 RAB24Q969Q5 203 aa5.76□□□□□ -1.49
SMARCAL1-212ENST00000486983 NEIL1Q96FI4 390 aaPredicted RBP5.76□□□□□ -1.49
SMARCAL1-212ENST00000486983 BBC3Q96PG8 261 aaPredicted RBP5.76□□□□□ -1.49
SMARCAL1-212ENST00000486983 CCL13Q99616 98 aa5.76□□□□□ -1.49
SMARCAL1-212ENST00000486983 SLC25A22Q9H936 323 aa5.76□□□□□ -1.49
SMARCAL1-212ENST00000486983 CHODLQ9H9P2 273 aa5.76□□□□□ -1.49
SMARCAL1-212ENST00000486983 SAP30LQ9HAJ7 183 aa5.76□□□□□ -1.49
SMARCAL1-212ENST00000486983 NPVFQ9HCQ7 196 aa5.76□□□□□ -1.49
SMARCAL1-212ENST00000486983 HEYLQ9NQ87 328 aaPredicted RBP5.76□□□□□ -1.49
SMARCAL1-212ENST00000486983 FKBP11Q9NYL4 201 aa5.76□□□□□ -1.49
SMARCAL1-212ENST00000486983 BET1LQ9NYM9 111 aa5.76□□□□□ -1.49
SMARCAL1-212ENST00000486983 KAAG1Q9UBP8 84 aa5.76□□□□□ -1.49
SMARCAL1-212ENST00000486983 LSM4Q9Y4Z0 139 aaKnown RBP5.76□□□□□ -1.49
SMARCAL1-212ENST00000486983 ARL2-SNX15V9GYD0 113 aa5.76□□□□□ -1.49
SMARCAL1-212ENST00000486983 ARID1AO14497 2285 aa5.76□□□□□ -1.49
SMARCAL1-212ENST00000486983 PPIAL4EA0A075B759 164 aa5.75□□□□□ -1.49
SMARCAL1-212ENST00000486983 A0A087X0M5 115 aa5.75□□□□□ -1.49
SMARCAL1-212ENST00000486983 A0A1B0GX30 115 aa5.75□□□□□ -1.49
SMARCAL1-212ENST00000486983 ZNF98A6NK75 572 aa5.75□□□□□ -1.49
SMARCAL1-212ENST00000486983 ZNF727A8MUV8 499 aa5.75□□□□□ -1.49
SMARCAL1-212ENST00000486983 PPIAL4DF5H284 164 aa5.75□□□□□ -1.49
SMARCAL1-212ENST00000486983 F6UZH7 168 aa5.75□□□□□ -1.49
SMARCAL1-212ENST00000486983 TMEM178BH3BS89 294 aa5.75□□□□□ -1.49
SMARCAL1-212ENST00000486983 AP4M1O00189 453 aa5.75□□□□□ -1.49
SMARCAL1-212ENST00000486983 RRHO14718 337 aa5.75□□□□□ -1.49
SMARCAL1-212ENST00000486983 TNFRSF13BO14836 293 aaPredicted RBP5.75□□□□□ -1.49
SMARCAL1-212ENST00000486983 PRB1P04280 392 aa5.75□□□□□ -1.49
SMARCAL1-212ENST00000486983 PPIAL4FP0DN26 164 aa5.75□□□□□ -1.49
SMARCAL1-212ENST00000486983 ZNF137PP52743 207 aa5.75□□□□□ -1.49
SMARCAL1-212ENST00000486983 CEBPGP53567 150 aa5.75□□□□□ -1.49
SMARCAL1-212ENST00000486983 UCNP55089 124 aa5.75□□□□□ -1.49
SMARCAL1-212ENST00000486983 S100A12P80511 92 aa5.75□□□□□ -1.49
SMARCAL1-212ENST00000486983 TLE1Q04724 770 aa5.75□□□□□ -1.49
SMARCAL1-212ENST00000486983 RAB31Q13636 194 aa5.75□□□□□ -1.49
SMARCAL1-212ENST00000486983 SSX2Q16385 188 aa5.75□□□□□ -1.49
SMARCAL1-212ENST00000486983 BSXQ3C1V8 233 aa5.75□□□□□ -1.49
SMARCAL1-212ENST00000486983 FBXL19-AS1Q494R0 122 aa5.75□□□□□ -1.49
SMARCAL1-212ENST00000486983 FAM201AQ5SY85 155 aa5.75□□□□□ -1.49
SMARCAL1-212ENST00000486983 NCMAPQ5T1S8 102 aa5.75□□□□□ -1.49
SMARCAL1-212ENST00000486983 ADAM5Q6NVV9 412 aa5.75□□□□□ -1.49
SMARCAL1-212ENST00000486983 DUX4L9Q6RFH8 374 aaPredicted RBP5.75□□□□□ -1.49
SMARCAL1-212ENST00000486983 SSX9Q7RTT3 188 aa5.75□□□□□ -1.49
SMARCAL1-212ENST00000486983 ZFP82Q8N141 532 aa5.75□□□□□ -1.49
SMARCAL1-212ENST00000486983 LYG1Q8N1E2 194 aa5.75□□□□□ -1.49
SMARCAL1-212ENST00000486983 OR4A5Q8NH83 315 aa5.75□□□□□ -1.49
SMARCAL1-212ENST00000486983 ZNF714Q96N38 554 aa5.75□□□□□ -1.49
SMARCAL1-212ENST00000486983 SSX3Q99909 188 aa5.75□□□□□ -1.49
SMARCAL1-212ENST00000486983 SMIM7Q9BQ49 75 aa5.75□□□□□ -1.49
SMARCAL1-212ENST00000486983 VKORC1Q9BQB6 163 aa5.75□□□□□ -1.49
SMARCAL1-212ENST00000486983 GGTLC1Q9BX51 225 aa5.75□□□□□ -1.49
SMARCAL1-212ENST00000486983 MS4A5Q9H3V2 200 aa5.75□□□□□ -1.49
SMARCAL1-212ENST00000486983 ENY2Q9NPA8 101 aa5.75□□□□□ -1.49
SMARCAL1-212ENST00000486983 TMEM106BQ9NUM4 274 aa5.75□□□□□ -1.49
SMARCAL1-212ENST00000486983 SLC25A10Q9UBX3 287 aaPredicted RBP5.75□□□□□ -1.49
SMARCAL1-212ENST00000486983 PPIAL4AQ9Y536 164 aa5.75□□□□□ -1.49
SMARCAL1-212ENST00000486983 ANKRD11Q6UB99 2663 aaPredicted RBP5.74□□□□□ -1.49
SMARCAL1-212ENST00000486983 TRBV23-1A0A0A0MS06 115 aa5.74□□□□□ -1.49
SMARCAL1-212ENST00000486983 TRAV3A0A0B4J244 114 aa5.74□□□□□ -1.49
SMARCAL1-212ENST00000486983 UPK2O00526 184 aa5.74□□□□□ -1.49
SMARCAL1-212ENST00000486983 CXorf1O96002 111 aa5.74□□□□□ -1.49
SMARCAL1-212ENST00000486983 APOA2P02652 100 aa5.74□□□□□ -1.49
SMARCAL1-212ENST00000486983 STAG3L2P0CL84 134 aa5.74□□□□□ -1.49
SMARCAL1-212ENST00000486983 STAG3L3P0CL85 134 aa5.74□□□□□ -1.49
SMARCAL1-212ENST00000486983 CT45A6P0DMU7 189 aa5.74□□□□□ -1.49
SMARCAL1-212ENST00000486983 CT45A5P0DMU8 189 aa5.74□□□□□ -1.49
SMARCAL1-212ENST00000486983 CT45A7P0DMV0 189 aa5.74□□□□□ -1.49
SMARCAL1-212ENST00000486983 CD99P14209 185 aa5.74□□□□□ -1.49
SMARCAL1-212ENST00000486983 RPL35P42766 123 aaKnown RBP5.74□□□□□ -1.49
SMARCAL1-212ENST00000486983 RPL29P47914 159 aaKnown RBP5.74□□□□□ -1.49
SMARCAL1-212ENST00000486983 MEOX2P50222 304 aa5.74□□□□□ -1.49
SMARCAL1-212ENST00000486983 AKR1D1P51857 326 aa5.74□□□□□ -1.49
SMARCAL1-212ENST00000486983 SNRPEP62304 92 aaKnown RBP5.74□□□□□ -1.49
SMARCAL1-212ENST00000486983 RPL31P62899 125 aaKnown RBP5.74□□□□□ -1.49
SMARCAL1-212ENST00000486983 CCL8P80075 99 aa5.74□□□□□ -1.49
SMARCAL1-212ENST00000486983 TMEM241Q24JQ0 296 aa5.74□□□□□ -1.49
SMARCAL1-212ENST00000486983 TMEM177Q53S58 311 aa5.74□□□□□ -1.49
SMARCAL1-212ENST00000486983 LRRC10Q5BKY1 277 aa5.74□□□□□ -1.49
SMARCAL1-212ENST00000486983 SPINK9Q5DT21 86 aa5.74□□□□□ -1.49
SMARCAL1-212ENST00000486983 TEPPQ6URK8 271 aa5.74□□□□□ -1.49
SMARCAL1-212ENST00000486983 PDPNQ86YL7 162 aa5.74□□□□□ -1.49
SMARCAL1-212ENST00000486983 TGIF2LYQ8IUE0 185 aa5.74□□□□□ -1.49
SMARCAL1-212ENST00000486983 VKORC1L1Q8N0U8 176 aa5.74□□□□□ -1.49
SMARCAL1-212ENST00000486983 PNKDQ8N490 385 aa5.74□□□□□ -1.49
SMARCAL1-212ENST00000486983 OR5AN1Q8NGI8 311 aa5.74□□□□□ -1.49
SMARCAL1-212ENST00000486983 OR1L8Q8NGR8 309 aa5.74□□□□□ -1.49
SMARCAL1-212ENST00000486983 VSTM2AQ8TAG5 236 aa5.74□□□□□ -1.49
SMARCAL1-212ENST00000486983 NANPQ8TBE9 248 aa5.74□□□□□ -1.49
SMARCAL1-212ENST00000486983 TMEM170AQ8WVE7 144 aa5.74□□□□□ -1.49
SMARCAL1-212ENST00000486983 RND1Q92730 232 aa5.74□□□□□ -1.49
SMARCAL1-212ENST00000486983 NEUROG1Q92886 237 aa5.74□□□□□ -1.49
SMARCAL1-212ENST00000486983 RNASE6Q93091 150 aaKnown RBP5.74□□□□□ -1.49
SMARCAL1-212ENST00000486983 ANAPC16Q96DE5 110 aa5.74□□□□□ -1.49
SMARCAL1-212ENST00000486983 SNRNP40Q96DI7 357 aaKnown RBP5.74□□□□□ -1.49
SMARCAL1-212ENST00000486983 ZNF503Q96F45 646 aa5.74□□□□□ -1.49
SMARCAL1-212ENST00000486983 MGST2Q99735 147 aa5.74□□□□□ -1.49
SMARCAL1-212ENST00000486983 PYGO2Q9BRQ0 406 aa5.74□□□□□ -1.49
SMARCAL1-212ENST00000486983 PCGF1Q9BSM1 259 aa5.74□□□□□ -1.49
SMARCAL1-212ENST00000486983 TMEM204Q9BSN7 226 aa5.74□□□□□ -1.49
SMARCAL1-212ENST00000486983 PARLQ9H300 379 aa5.74□□□□□ -1.49
SMARCAL1-212ENST00000486983 PLEKHA3Q9HB20 300 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms