RNA–Protein interactions for RNA: ENST00000486235.5

TMEM39A-209, Transcript of transmembrane protein 39A, human

TSL 3

Gene TMEM39A, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMEM39A-209	ENST00000486235	KLK11	Q9UBX7	282 aa		5	□□□□□ -1.61
TMEM39A-209	ENST00000486235		R4GMQ9	66 aa		5	□□□□□ -1.61
TMEM39A-209	ENST00000486235	LYST	Q99698	3801 aa		4.99	□□□□□ -1.61
TMEM39A-209	ENST00000486235	HYDIN	Q4G0P3	5121 aa		4.99	□□□□□ -1.61
TMEM39A-209	ENST00000486235	TEX13D	A0A0J9YY54	714 aa	Predicted RBP	4.99	□□□□□ -1.61
TMEM39A-209	ENST00000486235		A0A1W2PPE3	182 aa		4.99	□□□□□ -1.61
TMEM39A-209	ENST00000486235	ODAM	A1E959	279 aa		4.99	□□□□□ -1.61
TMEM39A-209	ENST00000486235	NCBP2L	A6PVI3	153 aa	Known RBP	4.99	□□□□□ -1.61
TMEM39A-209	ENST00000486235	ZNF736	B4DX44	427 aa	Predicted RBP	4.99	□□□□□ -1.61
TMEM39A-209	ENST00000486235	SYT7	O43581	403 aa		4.99	□□□□□ -1.61
TMEM39A-209	ENST00000486235	GATC	O43716	136 aa	Known RBP	4.99	□□□□□ -1.61
TMEM39A-209	ENST00000486235	KDM4B	O94953	1096 aa		4.99	□□□□□ -1.61
TMEM39A-209	ENST00000486235	NXPH3	O95157	252 aa		4.99	□□□□□ -1.61
TMEM39A-209	ENST00000486235	OR2H2	O95918	312 aa		4.99	□□□□□ -1.61
TMEM39A-209	ENST00000486235	RLN2	P04090	185 aa		4.99	□□□□□ -1.61
TMEM39A-209	ENST00000486235	HCK	P08631	526 aa		4.99	□□□□□ -1.61
TMEM39A-209	ENST00000486235	ZNF44	P15621	663 aa		4.99	□□□□□ -1.61
TMEM39A-209	ENST00000486235	GLP1R	P43220	463 aa		4.99	□□□□□ -1.61
TMEM39A-209	ENST00000486235	GPR12	P47775	334 aa		4.99	□□□□□ -1.61
TMEM39A-209	ENST00000486235	CDX1	P47902	265 aa	Predicted RBP	4.99	□□□□□ -1.61
TMEM39A-209	ENST00000486235	GNG10	P50151	68 aa		4.99	□□□□□ -1.61
TMEM39A-209	ENST00000486235	MEOX2	P50222	304 aa		4.99	□□□□□ -1.61
TMEM39A-209	ENST00000486235	FUT6	P51993	359 aa		4.99	□□□□□ -1.61
TMEM39A-209	ENST00000486235	CD81	P60033	236 aa		4.99	□□□□□ -1.61
TMEM39A-209	ENST00000486235	MADCAM1	Q13477	382 aa		4.99	□□□□□ -1.61
TMEM39A-209	ENST00000486235	ATXN7L3	Q14CW9	347 aa	Predicted RBP	4.99	□□□□□ -1.61
TMEM39A-209	ENST00000486235	C17orf58	Q2M2W7	97 aa		4.99	□□□□□ -1.61
TMEM39A-209	ENST00000486235	HES5	Q5TA89	166 aa		4.99	□□□□□ -1.61
TMEM39A-209	ENST00000486235	ASPHD1	Q5U4P2	390 aa		4.99	□□□□□ -1.61
TMEM39A-209	ENST00000486235	LYG2	Q86SG7	212 aa		4.99	□□□□□ -1.61
TMEM39A-209	ENST00000486235	TBC1D26	Q86UD7	250 aa		4.99	□□□□□ -1.61
TMEM39A-209	ENST00000486235	SLC25A42	Q86VD7	318 aa		4.99	□□□□□ -1.61
TMEM39A-209	ENST00000486235	C15orf54	Q8N8G6	183 aa		4.99	□□□□□ -1.61
TMEM39A-209	ENST00000486235	OR4D10	Q8NGI6	311 aa		4.99	□□□□□ -1.61
TMEM39A-209	ENST00000486235	MITD1	Q8WV92	249 aa		4.99	□□□□□ -1.61
TMEM39A-209	ENST00000486235	C4orf3	Q8WVX3	66 aa		4.99	□□□□□ -1.61
TMEM39A-209	ENST00000486235	COQ2	Q96H96	371 aa		4.99	□□□□□ -1.61
TMEM39A-209	ENST00000486235	OR5B12	Q96R08	314 aa		4.99	□□□□□ -1.61
TMEM39A-209	ENST00000486235	C12orf57	Q99622	126 aa		4.99	□□□□□ -1.61
TMEM39A-209	ENST00000486235	ZNF251	Q9BRH9	671 aa		4.99	□□□□□ -1.61
TMEM39A-209	ENST00000486235	SMDT1	Q9H4I9	107 aa		4.99	□□□□□ -1.61
TMEM39A-209	ENST00000486235	TUBA4B	Q9H853	241 aa		4.99	□□□□□ -1.61
TMEM39A-209	ENST00000486235	MRM2	Q9UI43	246 aa	Known RBP	4.99	□□□□□ -1.61
TMEM39A-209	ENST00000486235	FLVCR2	Q9UPI3	526 aa		4.99	□□□□□ -1.61
TMEM39A-209	ENST00000486235	AMMECR1	Q9Y4X0	333 aa	Predicted RBP	4.99	□□□□□ -1.61
TMEM39A-209	ENST00000486235	OR4C45	A6NMZ5	311 aa		4.98	□□□□□ -1.61
TMEM39A-209	ENST00000486235	ZNF729	A6NN14	1252 aa	Predicted RBP	4.98	□□□□□ -1.61
TMEM39A-209	ENST00000486235	DHRS7C	A6NNS2	312 aa		4.98	□□□□□ -1.61
TMEM39A-209	ENST00000486235		J3QR06	171 aa		4.98	□□□□□ -1.61
TMEM39A-209	ENST00000486235	WRB	O00258	174 aa		4.98	□□□□□ -1.61
TMEM39A-209	ENST00000486235	HSPB6	O14558	160 aa		4.98	□□□□□ -1.61
TMEM39A-209	ENST00000486235	PRY	O14603	147 aa		4.98	□□□□□ -1.61
TMEM39A-209	ENST00000486235	SH2D1B	O14796	132 aa		4.98	□□□□□ -1.61
TMEM39A-209	ENST00000486235	SAP30	O75446	220 aa		4.98	□□□□□ -1.61
TMEM39A-209	ENST00000486235	S100A6	P06703	90 aa		4.98	□□□□□ -1.61
TMEM39A-209	ENST00000486235	GP9	P14770	177 aa		4.98	□□□□□ -1.61
TMEM39A-209	ENST00000486235	EDN2	P20800	178 aa		4.98	□□□□□ -1.61
TMEM39A-209	ENST00000486235	CCL1	P22362	96 aa		4.98	□□□□□ -1.61
TMEM39A-209	ENST00000486235	REG1B	P48304	166 aa		4.98	□□□□□ -1.61
TMEM39A-209	ENST00000486235	ATP1B3	P54709	279 aa		4.98	□□□□□ -1.61
TMEM39A-209	ENST00000486235	CFHR3	Q02985	330 aa		4.98	□□□□□ -1.61
TMEM39A-209	ENST00000486235	PJVK	Q0ZLH3	352 aa		4.98	□□□□□ -1.61
TMEM39A-209	ENST00000486235	ZNF146	Q15072	292 aa		4.98	□□□□□ -1.61
TMEM39A-209	ENST00000486235	SURF2	Q15527	256 aa	Predicted RBP	4.98	□□□□□ -1.61
TMEM39A-209	ENST00000486235	RNASE10	Q5GAN6	216 aa	Known RBP	4.98	□□□□□ -1.61
TMEM39A-209	ENST00000486235	SPIN3	Q5JUX0	258 aa		4.98	□□□□□ -1.61
TMEM39A-209	ENST00000486235	DNLZ	Q5SXM8	178 aa		4.98	□□□□□ -1.61
TMEM39A-209	ENST00000486235	FAM53A	Q6NSI3	398 aa	Predicted RBP	4.98	□□□□□ -1.61
TMEM39A-209	ENST00000486235		Q6ZSR3	168 aa		4.98	□□□□□ -1.61
TMEM39A-209	ENST00000486235		Q6ZWC4	215 aa		4.98	□□□□□ -1.61
TMEM39A-209	ENST00000486235	MOB3B	Q86TA1	216 aa		4.98	□□□□□ -1.61
TMEM39A-209	ENST00000486235	BAP18	Q8IXM2	172 aa		4.98	□□□□□ -1.61
TMEM39A-209	ENST00000486235		Q8IYB0	196 aa		4.98	□□□□□ -1.61
TMEM39A-209	ENST00000486235	ARRDC1	Q8N5I2	433 aa		4.98	□□□□□ -1.61
TMEM39A-209	ENST00000486235	BPIFC	Q8NFQ6	507 aa		4.98	□□□□□ -1.61
TMEM39A-209	ENST00000486235	OR51S1	Q8NGJ8	323 aa		4.98	□□□□□ -1.61
TMEM39A-209	ENST00000486235	OR1N2	Q8NGR9	330 aa		4.98	□□□□□ -1.61
TMEM39A-209	ENST00000486235	OR2G2	Q8NGZ5	317 aa		4.98	□□□□□ -1.61
TMEM39A-209	ENST00000486235	GLYATL2	Q8WU03	294 aa		4.98	□□□□□ -1.61
TMEM39A-209	ENST00000486235	TMEM106A	Q96A25	262 aa		4.98	□□□□□ -1.61
TMEM39A-209	ENST00000486235	FAM3D	Q96BQ1	224 aa		4.98	□□□□□ -1.61
TMEM39A-209	ENST00000486235	RBMXL1	Q96E39	390 aa	Known RBP	4.98	□□□□□ -1.61
TMEM39A-209	ENST00000486235	HARBI1	Q96MB7	349 aa		4.98	□□□□□ -1.61
TMEM39A-209	ENST00000486235	GFI1	Q99684	422 aa		4.98	□□□□□ -1.61
TMEM39A-209	ENST00000486235	PDCD1LG2	Q9BQ51	273 aa		4.98	□□□□□ -1.61
TMEM39A-209	ENST00000486235	ZNF471	Q9BX82	626 aa	Predicted RBP	4.98	□□□□□ -1.61
TMEM39A-209	ENST00000486235	CHST5	Q9GZS9	411 aa		4.98	□□□□□ -1.61
TMEM39A-209	ENST00000486235	GNB4	Q9HAV0	340 aa		4.98	□□□□□ -1.61
TMEM39A-209	ENST00000486235	EDA2R	Q9HAV5	297 aa		4.98	□□□□□ -1.61
TMEM39A-209	ENST00000486235	SEBOX	Q9HB31	216 aa	Predicted RBP	4.98	□□□□□ -1.61
TMEM39A-209	ENST00000486235	SMCO4	Q9NRQ5	59 aa		4.98	□□□□□ -1.61
TMEM39A-209	ENST00000486235	PSG11	Q9UQ72	335 aa		4.98	□□□□□ -1.61
TMEM39A-209	ENST00000486235	TRAV18	A0A075B6X5	111 aa		4.97	□□□□□ -1.61
TMEM39A-209	ENST00000486235	TRAV14DV4	A0A0A6YYC5	116 aa		4.97	□□□□□ -1.61
TMEM39A-209	ENST00000486235	PIGBOS1	A0A0B4J2F0	54 aa		4.97	□□□□□ -1.61
TMEM39A-209	ENST00000486235	IGKV1-9	A0A0C4DH69	117 aa		4.97	□□□□□ -1.61
TMEM39A-209	ENST00000486235	IGKV1-12	A0A0C4DH73	117 aa		4.97	□□□□□ -1.61
TMEM39A-209	ENST00000486235	KBTBD11-OT1	A0A1B0GTJ5	212 aa		4.97	□□□□□ -1.61
TMEM39A-209	ENST00000486235	CBY3	A6NI87	242 aa		4.97	□□□□□ -1.61
TMEM39A-209	ENST00000486235	C1orf196	B1AJZ1	125 aa		4.97	□□□□□ -1.61

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