RNA–Protein interactions for RNA: ENST00000485994.5

VPS50-218, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-218ENST00000485994 FAM25GB3EWG6 89 aa5.33□□□□□ -1.56
VPS50-218ENST00000485994 H3BMQ9 156 aa5.33□□□□□ -1.56
VPS50-218ENST00000485994 GABARAPH6UMI1 98 aa5.33□□□□□ -1.56
VPS50-218ENST00000485994 BMPR1BO00238 502 aa5.33□□□□□ -1.56
VPS50-218ENST00000485994 CTDSPLO15194 276 aa5.33□□□□□ -1.56
VPS50-218ENST00000485994 CYB5BO43169 146 aa5.33□□□□□ -1.56
VPS50-218ENST00000485994 GGCTO75223 188 aaKnown RBP5.33□□□□□ -1.56
VPS50-218ENST00000485994 B3GALNT1O75752 331 aa5.33□□□□□ -1.56
VPS50-218ENST00000485994 S1PR2O95136 353 aa5.33□□□□□ -1.56
VPS50-218ENST00000485994 NDUFB8O95169 186 aa5.33□□□□□ -1.56
VPS50-218ENST00000485994 CD74P04233 296 aa5.33□□□□□ -1.56
VPS50-218ENST00000485994 SERPINE2P07093 398 aa5.33□□□□□ -1.56
VPS50-218ENST00000485994 TRAPPC2P0DI81 140 aa5.33□□□□□ -1.56
VPS50-218ENST00000485994 TRAPPC2BP0DI82 140 aa5.33□□□□□ -1.56
VPS50-218ENST00000485994 LPAR6P43657 344 aa5.33□□□□□ -1.56
VPS50-218ENST00000485994 SYNJ2BPP57105 145 aa5.33□□□□□ -1.56
VPS50-218ENST00000485994 C15orf32Q32M92 178 aa5.33□□□□□ -1.56
VPS50-218ENST00000485994 OR2B11Q5JQS5 317 aa5.33□□□□□ -1.56
VPS50-218ENST00000485994 C10orf55Q5SWW7 151 aa5.33□□□□□ -1.56
VPS50-218ENST00000485994 SSX9Q7RTT3 188 aa5.33□□□□□ -1.56
VPS50-218ENST00000485994 LHFPL1Q86WI0 220 aa5.33□□□□□ -1.56
VPS50-218ENST00000485994 SLC38A6Q8IZM9 456 aa5.33□□□□□ -1.56
VPS50-218ENST00000485994 TMEM229BQ8NBD8 167 aa5.33□□□□□ -1.56
VPS50-218ENST00000485994 OR1L6Q8NGR2 347 aa5.33□□□□□ -1.56
VPS50-218ENST00000485994 OR5B3Q8NH48 314 aa5.33□□□□□ -1.56
VPS50-218ENST00000485994 OR51H1Q8NH63 302 aa5.33□□□□□ -1.56
VPS50-218ENST00000485994 TERB2Q8NHR7 220 aa5.33□□□□□ -1.56
VPS50-218ENST00000485994 VN1R17PQ8TDU5 208 aa5.33□□□□□ -1.56
VPS50-218ENST00000485994 RAB2BQ8WUD1 216 aa5.33□□□□□ -1.56
VPS50-218ENST00000485994 FCAMRQ8WWV6 532 aa5.33□□□□□ -1.56
VPS50-218ENST00000485994 ISOC1Q96CN7 298 aa5.33□□□□□ -1.56
VPS50-218ENST00000485994 SEC22AQ96IW7 307 aa5.33□□□□□ -1.56
VPS50-218ENST00000485994 GPHA2Q96T91 129 aa5.33□□□□□ -1.56
VPS50-218ENST00000485994 QTRT1Q9BXR0 403 aaKnown RBP5.33□□□□□ -1.56
VPS50-218ENST00000485994 KRTAP4-5Q9BYR2 181 aa5.33□□□□□ -1.56
VPS50-218ENST00000485994 COMMD5Q9GZQ3 224 aa5.33□□□□□ -1.56
VPS50-218ENST00000485994 HRASLSQ9HDD0 168 aa5.33□□□□□ -1.56
VPS50-218ENST00000485994 NDUFA4L2Q9NRX3 87 aa5.33□□□□□ -1.56
VPS50-218ENST00000485994 TMEM140Q9NV12 185 aa5.33□□□□□ -1.56
VPS50-218ENST00000485994 KLK11Q9UBX7 282 aa5.33□□□□□ -1.56
VPS50-218ENST00000485994 FBXL7Q9UJT9 491 aa5.33□□□□□ -1.56
VPS50-218ENST00000485994 DNAH7Q8WXX0 4024 aa5.33□□□□□ -1.56
VPS50-218ENST00000485994 HUWE1Q7Z6Z7 4374 aaKnown RBP5.33□□□□□ -1.56
VPS50-218ENST00000485994 CTDSP2O14595 271 aa5.32□□□□□ -1.56
VPS50-218ENST00000485994 OR2J3O76001 311 aa5.32□□□□□ -1.56
VPS50-218ENST00000485994 TRBV12-3P01733 135 aa5.32□□□□□ -1.56
VPS50-218ENST00000485994 PRH1P02810 166 aa5.32□□□□□ -1.56
VPS50-218ENST00000485994 CD3DP04234 171 aa5.32□□□□□ -1.56
VPS50-218ENST00000485994 FCER2P06734 321 aa5.32□□□□□ -1.56
VPS50-218ENST00000485994 APELAP0DMC3 54 aa5.32□□□□□ -1.56
VPS50-218ENST00000485994 DEFA4P12838 97 aa5.32□□□□□ -1.56
VPS50-218ENST00000485994 AREGP15514 252 aa5.32□□□□□ -1.56
VPS50-218ENST00000485994 ERVK-16P61578 105 aa5.32□□□□□ -1.56
VPS50-218ENST00000485994 EXOSC2Q13868 293 aaKnown RBP5.32□□□□□ -1.56
VPS50-218ENST00000485994 FAM106AQ4KMX7 169 aa5.32□□□□□ -1.56
VPS50-218ENST00000485994 SNX29P2Q8IUI4 249 aa5.32□□□□□ -1.56
VPS50-218ENST00000485994 LAX1Q8IWV1 398 aa5.32□□□□□ -1.56
VPS50-218ENST00000485994 Q8N402 240 aa5.32□□□□□ -1.56
VPS50-218ENST00000485994 DMBX1Q8NFW5 382 aa5.32□□□□□ -1.56
VPS50-218ENST00000485994 OR52I2Q8NH67 350 aa5.32□□□□□ -1.56
VPS50-218ENST00000485994 ZFAND1Q8TCF1 268 aa5.32□□□□□ -1.56
VPS50-218ENST00000485994 EEF1AKMT3Q96AZ1 226 aa5.32□□□□□ -1.56
VPS50-218ENST00000485994 TMEM56Q96MV1 263 aa5.32□□□□□ -1.56
VPS50-218ENST00000485994 WWC2-AS2Q96NR7 200 aa5.32□□□□□ -1.56
VPS50-218ENST00000485994 THAP7Q9BT49 309 aaPredicted RBP5.32□□□□□ -1.56
VPS50-218ENST00000485994 NXF2Q9GZY0 626 aaKnown RBP5.32□□□□□ -1.56
VPS50-218ENST00000485994 FXYD6Q9H0Q3 95 aa5.32□□□□□ -1.56
VPS50-218ENST00000485994 MRPL18Q9H0U6 180 aaKnown RBP5.32□□□□□ -1.56
VPS50-218ENST00000485994 MIXL1Q9H2W2 232 aa5.32□□□□□ -1.56
VPS50-218ENST00000485994 TMEM14BQ9NUH8 114 aa5.32□□□□□ -1.56
VPS50-218ENST00000485994 C19orf73Q9NVV2 129 aa5.32□□□□□ -1.56
VPS50-218ENST00000485994 TECRQ9NZ01 308 aaKnown RBP5.32□□□□□ -1.56
VPS50-218ENST00000485994 PRNDQ9UKY0 176 aa5.32□□□□□ -1.56
VPS50-218ENST00000485994 A6NHS1 94 aa5.31□□□□□ -1.56
VPS50-218ENST00000485994 ZNF785A8K8V0 405 aa5.31□□□□□ -1.56
VPS50-218ENST00000485994 A8MWP6 167 aa5.31□□□□□ -1.56
VPS50-218ENST00000485994 INS-IGF2F8WCM5 200 aa5.31□□□□□ -1.56
VPS50-218ENST00000485994 SNAPC5O75971 98 aa5.31□□□□□ -1.56
VPS50-218ENST00000485994 ATG12O94817 140 aa5.31□□□□□ -1.56
VPS50-218ENST00000485994 OR2C1O95371 312 aa5.31□□□□□ -1.56
VPS50-218ENST00000485994 LY86O95711 162 aa5.31□□□□□ -1.56
VPS50-218ENST00000485994 KRASP01116 189 aa5.31□□□□□ -1.56
VPS50-218ENST00000485994 IGKV1-39P01597 117 aa5.31□□□□□ -1.56
VPS50-218ENST00000485994 IGKV1D-39P04432 117 aa5.31□□□□□ -1.56
VPS50-218ENST00000485994 RLN1P04808 185 aa5.31□□□□□ -1.56
VPS50-218ENST00000485994 IFNA6P05013 189 aa5.31□□□□□ -1.56
VPS50-218ENST00000485994 CLEC3BP05452 202 aa5.31□□□□□ -1.56
VPS50-218ENST00000485994 C8orf88P0DMB2 117 aa5.31□□□□□ -1.56
VPS50-218ENST00000485994 ELLP55199 621 aaPredicted RBP5.31□□□□□ -1.56
VPS50-218ENST00000485994 TAS2R19P59542 299 aa5.31□□□□□ -1.56
VPS50-218ENST00000485994 WT1-ASQ06250 92 aa5.31□□□□□ -1.56
VPS50-218ENST00000485994 SURF2Q15527 256 aaPredicted RBP5.31□□□□□ -1.56
VPS50-218ENST00000485994 DEFB114Q30KQ6 69 aa5.31□□□□□ -1.56
VPS50-218ENST00000485994 RNASE10Q5GAN6 216 aaKnown RBP5.31□□□□□ -1.56
VPS50-218ENST00000485994 LCN12Q6JVE5 192 aa5.31□□□□□ -1.56
VPS50-218ENST00000485994 SPSB3Q6PJ21 355 aa5.31□□□□□ -1.56
VPS50-218ENST00000485994 ADAMTSL5Q6ZMM2 481 aa5.31□□□□□ -1.56
VPS50-218ENST00000485994 TBC1D26Q86UD7 250 aa5.31□□□□□ -1.56
VPS50-218ENST00000485994 SBSPONQ8IVN8 264 aa5.31□□□□□ -1.56
VPS50-218ENST00000485994 GDPD1Q8N9F7 314 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms