RNA–Protein interactions for RNA: ENST00000485465.1

CHMP3-207, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 920 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-207ENST00000485465 IL15RAQ13261 267 aa13.83□□□□□ -0.2
CHMP3-207ENST00000485465 LFNGQ8NES3 379 aa13.83□□□□□ -0.2
CHMP3-207ENST00000485465 OR10W1Q8NGF6 305 aa13.83□□□□□ -0.2
CHMP3-207ENST00000485465 NOL4LQ96MY1 436 aaPredicted RBP13.83□□□□□ -0.2
CHMP3-207ENST00000485465 SRSF8Q9BRL6 282 aaKnown RBP13.83□□□□□ -0.2
CHMP3-207ENST00000485465 NMES1Q9C002 83 aa13.83□□□□□ -0.2
CHMP3-207ENST00000485465 SERTAD4Q9NUC0 356 aa13.83□□□□□ -0.2
CHMP3-207ENST00000485465 WSB1Q9Y6I7 421 aa13.83□□□□□ -0.2
CHMP3-207ENST00000485465 hCG_2014768A0A024R1R8 64 aa13.82□□□□□ -0.2
CHMP3-207ENST00000485465 TRAV41A0A0B4J266 112 aa13.82□□□□□ -0.2
CHMP3-207ENST00000485465 A0A1W2PN81 502 aa13.82□□□□□ -0.2
CHMP3-207ENST00000485465 CEBPZOSA8MTT3 80 aa13.82□□□□□ -0.2
CHMP3-207ENST00000485465 APELAP0DMC3 54 aa13.82□□□□□ -0.2
CHMP3-207ENST00000485465 HKR1P10072 659 aa13.82□□□□□ -0.2
CHMP3-207ENST00000485465 CHRNA7P36544 502 aa13.82□□□□□ -0.2
CHMP3-207ENST00000485465 CYCSP99999 105 aaKnown RBP13.82□□□□□ -0.2
CHMP3-207ENST00000485465 SRSF4Q08170 494 aaKnown RBP13.82□□□□□ -0.2
CHMP3-207ENST00000485465 TMEM267Q0VDI3 215 aaPredicted RBP13.82□□□□□ -0.2
CHMP3-207ENST00000485465 ECSCRQ19T08 205 aa13.82□□□□□ -0.2
CHMP3-207ENST00000485465 AKIRIN2Q53H80 203 aa13.82□□□□□ -0.2
CHMP3-207ENST00000485465 ASPHD1Q5U4P2 390 aa13.82□□□□□ -0.2
CHMP3-207ENST00000485465 UNQ5815/PRO19632Q6UWF5 114 aa13.82□□□□□ -0.2
CHMP3-207ENST00000485465 STPG2Q8N412 459 aa13.82□□□□□ -0.2
CHMP3-207ENST00000485465 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.82□□□□□ -0.2
CHMP3-207ENST00000485465 OR4F5Q8NH21 305 aa13.82□□□□□ -0.2
CHMP3-207ENST00000485465 WDR89Q96FK6 387 aaPredicted RBP13.82□□□□□ -0.2
CHMP3-207ENST00000485465 TMEM68Q96MH6 324 aa13.82□□□□□ -0.2
CHMP3-207ENST00000485465 RBKSQ9H477 322 aa13.82□□□□□ -0.2
CHMP3-207ENST00000485465 PLEKHA3Q9HB20 300 aa13.82□□□□□ -0.2
CHMP3-207ENST00000485465 IGLC7A0M8Q6 106 aa13.81□□□□□ -0.2
CHMP3-207ENST00000485465 G3V318 75 aa13.81□□□□□ -0.2
CHMP3-207ENST00000485465 MED6O75586 246 aa13.81□□□□□ -0.2
CHMP3-207ENST00000485465 SCGB1D2O95969 90 aa13.81□□□□□ -0.2
CHMP3-207ENST00000485465 MBPP02686 304 aaPredicted RBP13.81□□□□□ -0.2
CHMP3-207ENST00000485465 HOXA1P49639 335 aaPredicted RBP13.81□□□□□ -0.2
CHMP3-207ENST00000485465 WT1-ASQ06250 92 aa13.81□□□□□ -0.2
CHMP3-207ENST00000485465 C19orf54Q5BKX5 351 aa13.81□□□□□ -0.2
CHMP3-207ENST00000485465 HSD17B13Q7Z5P4 300 aaPredicted RBP13.81□□□□□ -0.2
CHMP3-207ENST00000485465 LINC01006Q8NI28 216 aa13.81□□□□□ -0.2
CHMP3-207ENST00000485465 ZNF436Q9C0F3 470 aaPredicted RBP13.81□□□□□ -0.2
CHMP3-207ENST00000485465 MAGT1Q9H0U3 335 aa13.81□□□□□ -0.2
CHMP3-207ENST00000485465 ENY2Q9NPA8 101 aa13.81□□□□□ -0.2
CHMP3-207ENST00000485465 NF1P21359 2839 aa13.81□□□□□ -0.2
CHMP3-207ENST00000485465 TNCP24821 2201 aa13.8□□□□□ -0.2
CHMP3-207ENST00000485465 INS-IGF2F8WCM5 200 aa13.8□□□□□ -0.2
CHMP3-207ENST00000485465 PLXNB1O43157 2135 aa13.8□□□□□ -0.2
CHMP3-207ENST00000485465 SYNGR2O43760 224 aa13.8□□□□□ -0.2
CHMP3-207ENST00000485465 OR13C7P0DN81 318 aa13.8□□□□□ -0.2
CHMP3-207ENST00000485465 AREGP15514 252 aa13.8□□□□□ -0.2
CHMP3-207ENST00000485465 POLR2GP62487 172 aaKnown RBP eCLIP13.8□□□□□ -0.2
CHMP3-207ENST00000485465 MRPL41Q8IXM3 137 aaKnown RBP13.8□□□□□ -0.2
CHMP3-207ENST00000485465 TTC9CQ8N5M4 171 aa13.8□□□□□ -0.2
CHMP3-207ENST00000485465 REG1AP05451 166 aa13.79□□□□□ -0.2
CHMP3-207ENST00000485465 PSMB6P28072 239 aa13.79□□□□□ -0.2
CHMP3-207ENST00000485465 PPIFP30405 207 aaKnown RBP13.79□□□□□ -0.2
CHMP3-207ENST00000485465 ERHP84090 104 aaKnown RBP13.79□□□□□ -0.2
CHMP3-207ENST00000485465 CFHR3Q02985 330 aa13.79□□□□□ -0.2
CHMP3-207ENST00000485465 OR2C3Q8N628 320 aa13.79□□□□□ -0.2
CHMP3-207ENST00000485465 OR5T1Q8NG75 326 aa13.79□□□□□ -0.2
CHMP3-207ENST00000485465 DTD1Q8TEA8 209 aa13.79□□□□□ -0.2
CHMP3-207ENST00000485465 CHAC2Q8WUX2 184 aa13.79□□□□□ -0.2
CHMP3-207ENST00000485465 GON7Q9BXV9 100 aa13.79□□□□□ -0.2
CHMP3-207ENST00000485465 WNT10AQ9GZT5 417 aa13.79□□□□□ -0.2
CHMP3-207ENST00000485465 TET2Q6N021 2002 aaPredicted RBP13.79□□□□□ -0.2
CHMP3-207ENST00000485465 CLPSL1A2RUU4 121 aa13.78□□□□□ -0.2
CHMP3-207ENST00000485465 NPIPB5A8MRT5 1133 aa13.78□□□□□ -0.2
CHMP3-207ENST00000485465 K7EPK0 472 aa13.78□□□□□ -0.2
CHMP3-207ENST00000485465 WRBO00258 174 aa13.78□□□□□ -0.2
CHMP3-207ENST00000485465 CRYGCP07315 174 aa13.78□□□□□ -0.2
CHMP3-207ENST00000485465 GIPP09681 153 aaPredicted RBP13.78□□□□□ -0.2
CHMP3-207ENST00000485465 RAB32Q13637 225 aa13.78□□□□□ -0.2
CHMP3-207ENST00000485465 C11orf87Q6NUJ2 197 aa13.78□□□□□ -0.2
CHMP3-207ENST00000485465 FAM110DQ8TAY7 271 aaPredicted RBP13.78□□□□□ -0.2
CHMP3-207ENST00000485465 ASB13Q8WXK3 278 aa13.78□□□□□ -0.2
CHMP3-207ENST00000485465 HIPK2Q9H2X6 1198 aa13.78□□□□□ -0.2
CHMP3-207ENST00000485465 HEYLQ9NQ87 328 aaPredicted RBP13.78□□□□□ -0.2
CHMP3-207ENST00000485465 ZFP57Q9NU63 452 aa13.78□□□□□ -0.2
CHMP3-207ENST00000485465 RCL1Q9Y2P8 373 aaKnown RBP13.78□□□□□ -0.2
CHMP3-207ENST00000485465 LSM5Q9Y4Y9 91 aaKnown RBP13.78□□□□□ -0.2
CHMP3-207ENST00000485465 PSMB11A5LHX3 300 aa13.77□□□□□ -0.21
CHMP3-207ENST00000485465 SSSCA1O60232 199 aa13.77□□□□□ -0.21
CHMP3-207ENST00000485465 IAPPP10997 89 aa13.77□□□□□ -0.21
CHMP3-207ENST00000485465 CTRB1P17538 263 aa13.77□□□□□ -0.21
CHMP3-207ENST00000485465 MDKP21741 143 aaPredicted RBP13.77□□□□□ -0.21
CHMP3-207ENST00000485465 BCAP31P51572 246 aa13.77□□□□□ -0.21
CHMP3-207ENST00000485465 S100A10P60903 97 aa13.77□□□□□ -0.21
CHMP3-207ENST00000485465 SLC35B1P78383 322 aa13.77□□□□□ -0.21
CHMP3-207ENST00000485465 KRTAP24-1Q3LI83 254 aa13.77□□□□□ -0.21
CHMP3-207ENST00000485465 CTRB2Q6GPI1 263 aa13.77□□□□□ -0.21
CHMP3-207ENST00000485465 CENPVQ7Z7K6 275 aaPredicted RBP13.77□□□□□ -0.21
CHMP3-207ENST00000485465 PPP1R1CQ8WVI7 109 aa13.77□□□□□ -0.21
CHMP3-207ENST00000485465 CIB3Q96Q77 187 aaPredicted RBP13.77□□□□□ -0.21
CHMP3-207ENST00000485465 RNF114Q9Y508 228 aa13.77□□□□□ -0.21
CHMP3-207ENST00000485465 A0A1B0GUS0 222 aa13.76□□□□□ -0.21
CHMP3-207ENST00000485465 SOX15O60248 233 aa13.76□□□□□ -0.21
CHMP3-207ENST00000485465 FBXO24O75426 580 aa13.76□□□□□ -0.21
CHMP3-207ENST00000485465 LY86O95711 162 aa13.76□□□□□ -0.21
CHMP3-207ENST00000485465 RAP2BP61225 183 aa13.76□□□□□ -0.21
CHMP3-207ENST00000485465 CD83Q01151 205 aa13.76□□□□□ -0.21
CHMP3-207ENST00000485465 FOXL1Q12952 345 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 140.9 ms