RNA–Protein interactions for RNA: ENST00000485091.5

CCDC78-214, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,734 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-214ENST00000485091 HKR1P10072 659 aa13.9□□□□□ -0.18
CCDC78-214ENST00000485091 HNF1AP20823 631 aa13.9□□□□□ -0.18
CCDC78-214ENST00000485091 RPL27AP46776 148 aaKnown RBP13.9□□□□□ -0.18
CCDC78-214ENST00000485091 PRCDQ00LT1 54 aa13.9□□□□□ -0.18
CCDC78-214ENST00000485091 OR2C3Q8N628 320 aa13.9□□□□□ -0.18
CCDC78-214ENST00000485091 NDUFA4L2Q9NRX3 87 aa13.9□□□□□ -0.18
CCDC78-214ENST00000485091 A6NDX4 124 aa13.89□□□□□ -0.19
CCDC78-214ENST00000485091 CGB1A6NKQ9 187 aa13.89□□□□□ -0.19
CCDC78-214ENST00000485091 GPR137BO60478 399 aa13.89□□□□□ -0.19
CCDC78-214ENST00000485091 TMEM267Q0VDI3 215 aaPredicted RBP13.89□□□□□ -0.19
CCDC78-214ENST00000485091 PDLIM3Q53GG5 364 aaPredicted RBP13.89□□□□□ -0.19
CCDC78-214ENST00000485091 ACOT7LQ6ZUV0 252 aa13.89□□□□□ -0.19
CCDC78-214ENST00000485091 OR8H1Q8NGG4 311 aa13.89□□□□□ -0.19
CCDC78-214ENST00000485091 SMIM8Q96KF7 97 aa13.89□□□□□ -0.19
CCDC78-214ENST00000485091 TMUB1Q9BVT8 246 aa13.89□□□□□ -0.19
CCDC78-214ENST00000485091 HIPK2Q9H2X6 1198 aa13.89□□□□□ -0.19
CCDC78-214ENST00000485091 IGSF23A1L1A6 192 aa13.88□□□□□ -0.19
CCDC78-214ENST00000485091 MAS1LP35410 378 aa13.88□□□□□ -0.19
CCDC78-214ENST00000485091 VDAC2P45880 294 aaPredicted RBP13.88□□□□□ -0.19
CCDC78-214ENST00000485091 IER3P46695 156 aa13.88□□□□□ -0.19
CCDC78-214ENST00000485091 COMPP49747 757 aaPredicted RBP13.88□□□□□ -0.19
CCDC78-214ENST00000485091 AANATQ16613 207 aa13.88□□□□□ -0.19
CCDC78-214ENST00000485091 Q6YL49 198 aa13.88□□□□□ -0.19
CCDC78-214ENST00000485091 SIGLECL1Q8N7X8 197 aa13.88□□□□□ -0.19
CCDC78-214ENST00000485091 CIB3Q96Q77 187 aaPredicted RBP13.88□□□□□ -0.19
CCDC78-214ENST00000485091 FAM103A1Q9BTL3 118 aaKnown RBP13.88□□□□□ -0.19
CCDC78-214ENST00000485091 LYRM2Q9NU23 88 aaPredicted RBP13.88□□□□□ -0.19
CCDC78-214ENST00000485091 CACFD1Q9UGQ2 172 aa13.88□□□□□ -0.19
CCDC78-214ENST00000485091 MOB4Q9Y3A3 225 aa13.88□□□□□ -0.19
CCDC78-214ENST00000485091 WSB1Q9Y6I7 421 aa13.88□□□□□ -0.19
CCDC78-214ENST00000485091 TEP1Q99973 2627 aaKnown RBP13.88□□□□□ -0.19
CCDC78-214ENST00000485091 A0A1B0GW64 132 aa13.87□□□□□ -0.19
CCDC78-214ENST00000485091 SSBP2P81877 361 aaPredicted RBP13.87□□□□□ -0.19
CCDC78-214ENST00000485091 NHLH2Q02577 135 aa13.87□□□□□ -0.19
CCDC78-214ENST00000485091 FXYD3Q14802 87 aa13.87□□□□□ -0.19
CCDC78-214ENST00000485091 TMUB2Q71RG4 321 aa13.87□□□□□ -0.19
CCDC78-214ENST00000485091 ABHD5Q8WTS1 349 aa13.87□□□□□ -0.19
CCDC78-214ENST00000485091 SRSF12Q8WXF0 261 aaKnown RBP13.87□□□□□ -0.19
CCDC78-214ENST00000485091 BSCL2Q96G97 398 aaPredicted RBP13.87□□□□□ -0.19
CCDC78-214ENST00000485091 AQP10Q96PS8 301 aa13.87□□□□□ -0.19
CCDC78-214ENST00000485091 ARL6Q9H0F7 186 aa13.87□□□□□ -0.19
CCDC78-214ENST00000485091 PITPNC1Q9UKF7 332 aa13.87□□□□□ -0.19
CCDC78-214ENST00000485091 ACANP16112 2415 aa13.87□□□□□ -0.19
CCDC78-214ENST00000485091 BTBD17A6NE02 478 aa13.87□□□□□ -0.19
CCDC78-214ENST00000485091 HOXA3O43365 443 aaPredicted RBP13.87□□□□□ -0.19
CCDC78-214ENST00000485091 TSC22D2O75157 780 aa13.87□□□□□ -0.19
CCDC78-214ENST00000485091 CST7O76096 145 aa13.87□□□□□ -0.19
CCDC78-214ENST00000485091 IFNA10P01566 189 aa13.87□□□□□ -0.19
CCDC78-214ENST00000485091 REG1AP05451 166 aa13.87□□□□□ -0.19
CCDC78-214ENST00000485091 METTL15P1P0C7V9 234 aa13.87□□□□□ -0.19
CCDC78-214ENST00000485091 CX3CL1P78423 397 aa13.87□□□□□ -0.19
CCDC78-214ENST00000485091 EWSR1Q01844 656 aaKnown RBP eCLIP13.87□□□□□ -0.19
CCDC78-214ENST00000485091 OR2F1Q13607 317 aa13.87□□□□□ -0.19
CCDC78-214ENST00000485091 TMEM252Q8N6L7 170 aa13.87□□□□□ -0.19
CCDC78-214ENST00000485091 C5orf56Q8N8D9 126 aa13.87□□□□□ -0.19
CCDC78-214ENST00000485091 OR4C12Q96R67 309 aa13.87□□□□□ -0.19
CCDC78-214ENST00000485091 SMIM3Q9BZL3 60 aa13.87□□□□□ -0.19
CCDC78-214ENST00000485091 GSX1Q9H4S2 264 aaPredicted RBP13.87□□□□□ -0.19
CCDC78-214ENST00000485091 TAS2R30P59541 319 aa13.86□□□□□ -0.19
CCDC78-214ENST00000485091 C9orf152Q5JTZ5 239 aa13.86□□□□□ -0.19
CCDC78-214ENST00000485091 TMEM217Q8N7C4 229 aa13.86□□□□□ -0.19
CCDC78-214ENST00000485091 SSMEM1Q8WWF3 244 aa13.86□□□□□ -0.19
CCDC78-214ENST00000485091 HSPB9Q9BQS6 159 aa13.86□□□□□ -0.19
CCDC78-214ENST00000485091 SLC25A31Q9H0C2 315 aa13.86□□□□□ -0.19
CCDC78-214ENST00000485091 STRAPQ9Y3F4 350 aaKnown RBP13.86□□□□□ -0.19
CCDC78-214ENST00000485091 TNCP24821 2201 aa13.85□□□□□ -0.19
CCDC78-214ENST00000485091 A0A1W2PN81 502 aa13.85□□□□□ -0.19
CCDC78-214ENST00000485091 OR13C7P0DN81 318 aa13.85□□□□□ -0.19
CCDC78-214ENST00000485091 CHRNA7P36544 502 aa13.85□□□□□ -0.19
CCDC78-214ENST00000485091 ZNF562Q6V9R5 426 aa13.85□□□□□ -0.19
CCDC78-214ENST00000485091 KCNRGQ8N5I3 272 aa13.85□□□□□ -0.19
CCDC78-214ENST00000485091 DUX5Q96PT3 197 aa13.85□□□□□ -0.19
CCDC78-214ENST00000485091 IGHV7-81A0A0B4J1V7 117 aa13.84□□□□□ -0.19
CCDC78-214ENST00000485091 A0A0D9SG52 128 aa13.84□□□□□ -0.19
CCDC78-214ENST00000485091 S100A11P31949 105 aa13.84□□□□□ -0.19
CCDC78-214ENST00000485091 ERHP84090 104 aaKnown RBP13.84□□□□□ -0.19
CCDC78-214ENST00000485091 NDPQ00604 133 aa13.84□□□□□ -0.19
CCDC78-214ENST00000485091 WT1-ASQ06250 92 aa13.84□□□□□ -0.19
CCDC78-214ENST00000485091 OR8G2PQ6IF36 304 aa13.84□□□□□ -0.19
CCDC78-214ENST00000485091 OR5R1Q8NH85 324 aa13.84□□□□□ -0.19
CCDC78-214ENST00000485091 ARPC1AQ92747 370 aa13.84□□□□□ -0.19
CCDC78-214ENST00000485091 PLXNB1O43157 2135 aa13.84□□□□□ -0.19
CCDC78-214ENST00000485091 TEX22C9J3V5 150 aa13.84□□□□□ -0.19
CCDC78-214ENST00000485091 FGF16O43320 207 aa13.84□□□□□ -0.19
CCDC78-214ENST00000485091 HLA-DRB1P01911 266 aa13.84□□□□□ -0.19
CCDC78-214ENST00000485091 AMY1AP04745 511 aa13.84□□□□□ -0.19
CCDC78-214ENST00000485091 AREGP15514 252 aa13.84□□□□□ -0.19
CCDC78-214ENST00000485091 ZNF345Q14585 488 aa13.84□□□□□ -0.19
CCDC78-214ENST00000485091 OPCMLQ14982 345 aa13.84□□□□□ -0.19
CCDC78-214ENST00000485091 STX12Q86Y82 276 aa13.84□□□□□ -0.19
CCDC78-214ENST00000485091 SLC24A4Q8NFF2 622 aa13.84□□□□□ -0.19
CCDC78-214ENST00000485091 PARP11Q9NR21 331 aa13.84□□□□□ -0.19
CCDC78-214ENST00000485091 TMEM160Q9NX00 188 aa13.84□□□□□ -0.19
CCDC78-214ENST00000485091 ANK3Q12955 4377 aaKnown RBP13.84□□□□□ -0.19
CCDC78-214ENST00000485091 KANTRA0A1W2PQU2 76 aa13.83□□□□□ -0.2
CCDC78-214ENST00000485091 C15orf62A8K5M9 175 aa13.83□□□□□ -0.2
CCDC78-214ENST00000485091 OR8U8P0C7N1 319 aa13.83□□□□□ -0.2
CCDC78-214ENST00000485091 FOSL1P15407 271 aa13.83□□□□□ -0.2
CCDC78-214ENST00000485091 SNCAP37840 140 aa13.83□□□□□ -0.2
CCDC78-214ENST00000485091 RPP30P78346 268 aaKnown RBP13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms