RNA–Protein interactions for RNA: ENST00000484441.1

CCDC66-219, Transcript of coiled-coil domain containing 66, humanhuman

TSL 1 (best)

Gene CCDC66, Length 302 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-219ENST00000484441 ZNF292O60281 2723 aa0.07□□□□□ -2.4
CCDC66-219ENST00000484441 TOX3O15405 576 aaPredicted RBP0.07□□□□□ -2.4
CCDC66-219ENST00000484441 ORM1P02763 201 aa0.07□□□□□ -2.4
CCDC66-219ENST00000484441 KRT7P08729 469 aa0.07□□□□□ -2.4
CCDC66-219ENST00000484441 METTL15P1P0C7V9 234 aa0.07□□□□□ -2.4
CCDC66-219ENST00000484441 SSX8Q7RTT4 187 aa0.07□□□□□ -2.4
CCDC66-219ENST00000484441 OR1M1Q8NGA1 313 aa0.07□□□□□ -2.4
CCDC66-219ENST00000484441 HAVCR2Q8TDQ0 301 aa0.07□□□□□ -2.4
CCDC66-219ENST00000484441 PACRGQ96M98 296 aaPredicted RBP0.07□□□□□ -2.4
CCDC66-219ENST00000484441 TIPINQ9BVW5 301 aa0.07□□□□□ -2.4
CCDC66-219ENST00000484441 BBS2Q9BXC9 721 aa0.07□□□□□ -2.4
CCDC66-219ENST00000484441 RSL24D1Q9UHA3 163 aaKnown RBP0.07□□□□□ -2.4
CCDC66-219ENST00000484441 ZFP30Q9Y2G7 519 aa0.07□□□□□ -2.4
CCDC66-219ENST00000484441 TGP01266 2768 aa0.07□□□□□ -2.4
CCDC66-219ENST00000484441 BPTFQ12830 3046 aa0.07□□□□□ -2.4
CCDC66-219ENST00000484441 ANAPC1Q9H1A4 1944 aa0.07□□□□□ -2.4
CCDC66-219ENST00000484441 UTP20O75691 2785 aaKnown RBP0.06□□□□□ -2.4
CCDC66-219ENST00000484441 ZANQ9Y493 2812 aa0.06□□□□□ -2.4
CCDC66-219ENST00000484441 CEP295Q9C0D2 2601 aa0.06□□□□□ -2.4
CCDC66-219ENST00000484441 FTCDNL1E5RQL4 147 aa0.06□□□□□ -2.4
CCDC66-219ENST00000484441 F8VZ95 297 aa0.06□□□□□ -2.4
CCDC66-219ENST00000484441 SULT1A3P0DMM9 295 aa0.06□□□□□ -2.4
CCDC66-219ENST00000484441 SULT1A4P0DMN0 295 aa0.06□□□□□ -2.4
CCDC66-219ENST00000484441 POLR2GP62487 172 aaKnown RBP eCLIP0.06□□□□□ -2.4
CCDC66-219ENST00000484441 TNFAIP8L3Q5GJ75 292 aa0.06□□□□□ -2.4
CCDC66-219ENST00000484441 C19orf60Q96EN9 201 aa0.06□□□□□ -2.4
CCDC66-219ENST00000484441 SMR3AQ99954 134 aa0.06□□□□□ -2.4
CCDC66-219ENST00000484441 OR52A5Q9H2C5 316 aa0.06□□□□□ -2.4
CCDC66-219ENST00000484441 MS4A6AQ9H2W1 248 aa0.06□□□□□ -2.4
CCDC66-219ENST00000484441 COQ4Q9Y3A0 265 aa0.06□□□□□ -2.4
CCDC66-219ENST00000484441 TENM2Q9NT68 2774 aa0.06□□□□□ -2.4
CCDC66-219ENST00000484441 CFAP46Q8IYW2 2715 aa0.06□□□□□ -2.4
CCDC66-219ENST00000484441 SYNE1Q8NF91 8797 aaKnown RBP0.06□□□□□ -2.4
CCDC66-219ENST00000484441 UBR5O95071 2799 aaPredicted RBP0.06□□□□□ -2.4
CCDC66-219ENST00000484441 TENM4Q6N022 2769 aa0.06□□□□□ -2.4
CCDC66-219ENST00000484441 MED12Q93074 2177 aa0.05□□□□□ -2.4
CCDC66-219ENST00000484441 SPG11Q96JI7 2443 aa0.05□□□□□ -2.4
CCDC66-219ENST00000484441 EML6Q6ZMW3 1958 aa0.05□□□□□ -2.4
CCDC66-219ENST00000484441 SLC22A1O15245 554 aa0.05□□□□□ -2.4
CCDC66-219ENST00000484441 COCHO43405 550 aa0.05□□□□□ -2.4
CCDC66-219ENST00000484441 DDTP30046 118 aa0.05□□□□□ -2.4
CCDC66-219ENST00000484441 HAAOP46952 286 aa0.05□□□□□ -2.4
CCDC66-219ENST00000484441 UBE2IP63279 158 aaKnown RBP0.05□□□□□ -2.4
CCDC66-219ENST00000484441 KRTAP20-1Q3LI63 56 aa0.05□□□□□ -2.4
CCDC66-219ENST00000484441 DNM1P34Q6PK57 102 aa0.05□□□□□ -2.4
CCDC66-219ENST00000484441 CRLF3Q8IUI8 442 aa0.05□□□□□ -2.4
CCDC66-219ENST00000484441 OR2T27Q8NH04 317 aa0.05□□□□□ -2.4
CCDC66-219ENST00000484441 C10orf95Q9H7T3 257 aa0.05□□□□□ -2.4
CCDC66-219ENST00000484441 GPR84Q9NQS5 396 aa0.05□□□□□ -2.4
CCDC66-219ENST00000484441 CACNA1EQ15878 2313 aa0.05□□□□□ -2.4
CCDC66-219ENST00000484441 C2CD3Q4AC94 2353 aa0.05□□□□□ -2.4
CCDC66-219ENST00000484441 COL7A1Q02388 2944 aa0.05□□□□□ -2.4
CCDC66-219ENST00000484441 OTOGQ6ZRI0 2925 aa0.05□□□□□ -2.4
CCDC66-219ENST00000484441 TLN2Q9Y4G6 2542 aa0.05□□□□□ -2.4
CCDC66-219ENST00000484441 PCNX1Q96RV3 2341 aa0.04□□□□□ -2.4
CCDC66-219ENST00000484441 ZNF879B4DU55 563 aa0.04□□□□□ -2.4
CCDC66-219ENST00000484441 CLPSP04118 112 aa0.04□□□□□ -2.4
CCDC66-219ENST00000484441 NFYAP23511 347 aaPredicted RBP0.04□□□□□ -2.4
CCDC66-219ENST00000484441 CSN1S1P47710 185 aa0.04□□□□□ -2.4
CCDC66-219ENST00000484441 CLDN12P56749 244 aa0.04□□□□□ -2.4
CCDC66-219ENST00000484441 SPERTQ8NA61 448 aa0.04□□□□□ -2.4
CCDC66-219ENST00000484441 ANKRD7Q92527 254 aa0.04□□□□□ -2.4
CCDC66-219ENST00000484441 AK3Q9UIJ7 227 aa0.04□□□□□ -2.4
CCDC66-219ENST00000484441 DSPP15924 2871 aaKnown RBP0.04□□□□□ -2.4
CCDC66-219ENST00000484441 LRP2P98164 4655 aa0.04□□□□□ -2.4
CCDC66-219ENST00000484441 NF1P21359 2839 aa0.04□□□□□ -2.4
CCDC66-219ENST00000484441 SNRNP200O75643 2136 aaKnown RBP0.04□□□□□ -2.4
CCDC66-219ENST00000484441 FLNBO75369 2602 aaKnown RBP0.03□□□□□ -2.4
CCDC66-219ENST00000484441 ITPR1Q14643 2758 aa0.03□□□□□ -2.4
CCDC66-219ENST00000484441 TMEM213A2RRL7 107 aa0.03□□□□□ -2.4
CCDC66-219ENST00000484441 ATP6V1G2O95670 118 aa0.03□□□□□ -2.4
CCDC66-219ENST00000484441 HLA-DMBP28068 263 aa0.03□□□□□ -2.4
CCDC66-219ENST00000484441 CXCR4P61073 352 aa0.03□□□□□ -2.4
CCDC66-219ENST00000484441 TNFAIP6P98066 277 aaPredicted RBP0.03□□□□□ -2.4
CCDC66-219ENST00000484441 FAM19A5Q7Z5A7 132 aaPredicted RBP0.03□□□□□ -2.4
CCDC66-219ENST00000484441 BOD1L2Q8IYS8 172 aa0.03□□□□□ -2.4
CCDC66-219ENST00000484441 TBC1D19Q8N5T2 526 aa0.03□□□□□ -2.4
CCDC66-219ENST00000484441 UBL4BQ8N7F7 174 aa0.03□□□□□ -2.4
CCDC66-219ENST00000484441 CNOT1A5YKK6 2376 aaKnown RBP0.03□□□□□ -2.41
CCDC66-219ENST00000484441 GVINP1Q7Z2Y8 2422 aa0.03□□□□□ -2.41
CCDC66-219ENST00000484441 KMT2AQ03164 3969 aa0.03□□□□□ -2.41
CCDC66-219ENST00000484441 STARD9Q9P2P6 4700 aa0.02□□□□□ -2.41
CCDC66-219ENST00000484441 SRRM2Q9UQ35 2752 aaKnown RBP0.02□□□□□ -2.41
CCDC66-219ENST00000484441 PRRC2CQ9Y520 2896 aaKnown RBP0.02□□□□□ -2.41
CCDC66-219ENST00000484441 LST1O00453 97 aa0.02□□□□□ -2.41
CCDC66-219ENST00000484441 C1QAP02745 245 aa0.02□□□□□ -2.41
CCDC66-219ENST00000484441 RD3LP0DJH9 198 aa0.02□□□□□ -2.41
CCDC66-219ENST00000484441 ZNF80P51504 273 aaPredicted RBP0.02□□□□□ -2.41
CCDC66-219ENST00000484441 AADACL4Q5VUY2 407 aa0.02□□□□□ -2.41
CCDC66-219ENST00000484441 C1orf158Q8N1D5 194 aa0.02□□□□□ -2.41
CCDC66-219ENST00000484441 ERMAPQ96PL5 475 aaPredicted RBP0.02□□□□□ -2.41
CCDC66-219ENST00000484441 ANAPC10Q9UM13 185 aa0.02□□□□□ -2.41
CCDC66-219ENST00000484441 ITPR2Q14571 2701 aa0.01□□□□□ -2.41
CCDC66-219ENST00000484441 PIEZO2Q9H5I5 2752 aa0.01□□□□□ -2.41
CCDC66-219ENST00000484441 WNK1Q9H4A3 2382 aa0.01□□□□□ -2.41
CCDC66-219ENST00000484441 ZDBF2Q9HCK1 2354 aa0.01□□□□□ -2.41
CCDC66-219ENST00000484441 K7ERQ8 282 aa0.01□□□□□ -2.41
CCDC66-219ENST00000484441 IGHV3-7P01780 117 aa0.01□□□□□ -2.41
CCDC66-219ENST00000484441 KRTAP2-3P0C7H8 128 aa0.01□□□□□ -2.41
CCDC66-219ENST00000484441 DMTNQ08495 405 aa0.01□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms