RNA–Protein interactions for RNA: ENST00000483764.5

MRPL28-210, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,512 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-210ENST00000483764 HLA-DRB5Q30154 266 aa13.9□□□□□ -0.18
MRPL28-210ENST00000483764 AWAT1Q58HT5 328 aa13.9□□□□□ -0.18
MRPL28-210ENST00000483764 NCR3LG1Q68D85 454 aa13.9□□□□□ -0.18
MRPL28-210ENST00000483764 RBMS3Q6XE24 437 aaKnown RBP13.9□□□□□ -0.18
MRPL28-210ENST00000483764 SLC35E3Q7Z769 313 aa13.9□□□□□ -0.18
MRPL28-210ENST00000483764 OR4S2Q8NH73 311 aa13.9□□□□□ -0.18
MRPL28-210ENST00000483764 TMEM186Q96B77 213 aa13.9□□□□□ -0.18
MRPL28-210ENST00000483764 R3HDM4Q96D70 268 aa13.9□□□□□ -0.18
MRPL28-210ENST00000483764 TBX15Q96SF7 602 aa13.9□□□□□ -0.18
MRPL28-210ENST00000483764 M0R036 132 aa13.9□□□□□ -0.19
MRPL28-210ENST00000483764 SRP19P09132 144 aaKnown RBP13.9□□□□□ -0.19
MRPL28-210ENST00000483764 NQO2P16083 231 aa13.9□□□□□ -0.19
MRPL28-210ENST00000483764 IL3RAP26951 378 aa13.9□□□□□ -0.19
MRPL28-210ENST00000483764 THBS3P49746 956 aa13.9□□□□□ -0.19
MRPL28-210ENST00000483764 ZNF137PP52743 207 aa13.9□□□□□ -0.19
MRPL28-210ENST00000483764 LINC00205P59089 165 aa13.9□□□□□ -0.19
MRPL28-210ENST00000483764 RUNX1Q01196 453 aa13.9□□□□□ -0.19
MRPL28-210ENST00000483764 PNRC1Q12796 327 aaPredicted RBP13.9□□□□□ -0.19
MRPL28-210ENST00000483764 KLRD1Q13241 179 aa13.9□□□□□ -0.19
MRPL28-210ENST00000483764 ZNF833PQ6ZTB9 187 aa13.9□□□□□ -0.19
MRPL28-210ENST00000483764 OR4P4Q8NGL7 312 aa13.9□□□□□ -0.19
MRPL28-210ENST00000483764 ST6GALNAC6Q969X2 333 aa13.9□□□□□ -0.19
MRPL28-210ENST00000483764 OR4C12Q96R67 309 aa13.9□□□□□ -0.19
MRPL28-210ENST00000483764 BIN3Q9NQY0 253 aa13.9□□□□□ -0.19
MRPL28-210ENST00000483764 HIF1ANQ9NWT6 349 aa13.9□□□□□ -0.19
MRPL28-210ENST00000483764 PRELID1Q9Y255 219 aa13.9□□□□□ -0.19
MRPL28-210ENST00000483764 LOC102723971A0A1B0GUV8 181 aa13.89□□□□□ -0.19
MRPL28-210ENST00000483764 CXorf65A6NEN9 183 aa13.89□□□□□ -0.19
MRPL28-210ENST00000483764 LINC00473A8K010 186 aa13.89□□□□□ -0.19
MRPL28-210ENST00000483764 COLCA2A8K830 154 aa13.89□□□□□ -0.19
MRPL28-210ENST00000483764 BUB1B-PAK6H3BSN5 160 aa13.89□□□□□ -0.19
MRPL28-210ENST00000483764 ARG1P05089 322 aa13.89□□□□□ -0.19
MRPL28-210ENST00000483764 HOXB4P17483 251 aaPredicted RBP13.89□□□□□ -0.19
MRPL28-210ENST00000483764 GATA3P23771 443 aa13.89□□□□□ -0.19
MRPL28-210ENST00000483764 MAS1LP35410 378 aa13.89□□□□□ -0.19
MRPL28-210ENST00000483764 ATP5IP56385 69 aaPredicted RBP13.89□□□□□ -0.19
MRPL28-210ENST00000483764 RAB5BP61020 215 aa13.89□□□□□ -0.19
MRPL28-210ENST00000483764 IZUMO4Q1ZYL8 232 aa13.89□□□□□ -0.19
MRPL28-210ENST00000483764 TMEM249Q2WGJ8 235 aa13.89□□□□□ -0.19
MRPL28-210ENST00000483764 SMUG1Q53HV7 270 aa13.89□□□□□ -0.19
MRPL28-210ENST00000483764 FAM71F2Q6NXP2 309 aa13.89□□□□□ -0.19
MRPL28-210ENST00000483764 HAPLN4Q86UW8 402 aa13.89□□□□□ -0.19
MRPL28-210ENST00000483764 ZNF709Q8N972 641 aa13.89□□□□□ -0.19
MRPL28-210ENST00000483764 KCNIP2Q9NS61 270 aa13.89□□□□□ -0.19
MRPL28-210ENST00000483764 AMMECR1Q9Y4X0 333 aaPredicted RBP13.89□□□□□ -0.19
MRPL28-210ENST00000483764 CEBPZOSA8MTT3 80 aa13.88□□□□□ -0.19
MRPL28-210ENST00000483764 ODF3BA8MYP8 253 aa13.88□□□□□ -0.19
MRPL28-210ENST00000483764 BRWD1-AS2P59051 145 aa13.88□□□□□ -0.19
MRPL28-210ENST00000483764 ICAM4Q14773 271 aa13.88□□□□□ -0.19
MRPL28-210ENST00000483764 ZNF429Q86V71 674 aa13.88□□□□□ -0.19
MRPL28-210ENST00000483764 OR4A16Q8NH70 328 aa13.88□□□□□ -0.19
MRPL28-210ENST00000483764 LHX4Q969G2 390 aa13.88□□□□□ -0.19
MRPL28-210ENST00000483764 NIPSNAP3BQ9BS92 247 aa13.88□□□□□ -0.19
MRPL28-210ENST00000483764 RPRMQ9NS64 109 aa13.88□□□□□ -0.19
MRPL28-210ENST00000483764 ABCA2Q9BZC7 2435 aa13.88□□□□□ -0.19
MRPL28-210ENST00000483764 MAST4O15021 2626 aa13.88□□□□□ -0.19
MRPL28-210ENST00000483764 RBMXL2O75526 392 aaKnown RBP13.87□□□□□ -0.19
MRPL28-210ENST00000483764 TGFAP01135 160 aa13.87□□□□□ -0.19
MRPL28-210ENST00000483764 CT45A6P0DMU7 189 aa13.87□□□□□ -0.19
MRPL28-210ENST00000483764 CT45A5P0DMU8 189 aa13.87□□□□□ -0.19
MRPL28-210ENST00000483764 CT45A7P0DMV0 189 aa13.87□□□□□ -0.19
MRPL28-210ENST00000483764 IGHV4-31P0DP07 118 aa13.87□□□□□ -0.19
MRPL28-210ENST00000483764 BCL2P10415 239 aa13.87□□□□□ -0.19
MRPL28-210ENST00000483764 HTR1DP28221 377 aa13.87□□□□□ -0.19
MRPL28-210ENST00000483764 RAB13P51153 203 aa13.87□□□□□ -0.19
MRPL28-210ENST00000483764 UBE2E1P51965 193 aa13.87□□□□□ -0.19
MRPL28-210ENST00000483764 ARL16Q0P5N6 197 aa13.87□□□□□ -0.19
MRPL28-210ENST00000483764 DIAPH2-AS1Q14236 149 aa13.87□□□□□ -0.19
MRPL28-210ENST00000483764 OR2B11Q5JQS5 317 aa13.87□□□□□ -0.19
MRPL28-210ENST00000483764 MALSU1Q96EH3 234 aa13.87□□□□□ -0.19
MRPL28-210ENST00000483764 C7orf69Q9H7B7 122 aa13.87□□□□□ -0.19
MRPL28-210ENST00000483764 VAX2Q9UIW0 290 aa13.87□□□□□ -0.19
MRPL28-210ENST00000483764 CSMD1Q96PZ7 3565 aa13.87□□□□□ -0.19
MRPL28-210ENST00000483764 PRRC2AP48634 2157 aaKnown RBP13.87□□□□□ -0.19
MRPL28-210ENST00000483764 A0A1W2PRD5 423 aa13.86□□□□□ -0.19
MRPL28-210ENST00000483764 A0A1W2PRF3 423 aa13.86□□□□□ -0.19
MRPL28-210ENST00000483764 A0A1W2PRM7 423 aa13.86□□□□□ -0.19
MRPL28-210ENST00000483764 C1orf196B1AJZ1 125 aa13.86□□□□□ -0.19
MRPL28-210ENST00000483764 LY6LH3BQJ8 138 aa13.86□□□□□ -0.19
MRPL28-210ENST00000483764 REG1BP48304 166 aa13.86□□□□□ -0.19
MRPL28-210ENST00000483764 POU2AF1Q16633 256 aa13.86□□□□□ -0.19
MRPL28-210ENST00000483764 TGIF2LXQ8IUE1 241 aa13.86□□□□□ -0.19
MRPL28-210ENST00000483764 ZNF383Q8NA42 475 aa13.86□□□□□ -0.19
MRPL28-210ENST00000483764 DDB2Q92466 427 aa13.86□□□□□ -0.19
MRPL28-210ENST00000483764 TVP23CQ96ET8 276 aa13.86□□□□□ -0.19
MRPL28-210ENST00000483764 RCC1LQ96I51 464 aaKnown RBP13.86□□□□□ -0.19
MRPL28-210ENST00000483764 MRPL20Q9BYC9 149 aaKnown RBP13.86□□□□□ -0.19
MRPL28-210ENST00000483764 DPM3Q9P2X0 92 aa13.86□□□□□ -0.19
MRPL28-210ENST00000483764 CTXND1A0A1B0GTU2 59 aa13.85□□□□□ -0.19
MRPL28-210ENST00000483764 UBE2L5PA0A1B0GUS4 154 aa13.85□□□□□ -0.19
MRPL28-210ENST00000483764 PMS2P5A8MQ11 134 aa13.85□□□□□ -0.19
MRPL28-210ENST00000483764 FCGR3BO75015 233 aa13.85□□□□□ -0.19
MRPL28-210ENST00000483764 HRASP01112 189 aa13.85□□□□□ -0.19
MRPL28-210ENST00000483764 IFNA4P05014 189 aa13.85□□□□□ -0.19
MRPL28-210ENST00000483764 SNRNP70P08621 437 aaKnown RBP13.85□□□□□ -0.19
MRPL28-210ENST00000483764 OR13C7P0DN81 318 aa13.85□□□□□ -0.19
MRPL28-210ENST00000483764 CCL20P78556 96 aa13.85□□□□□ -0.19
MRPL28-210ENST00000483764 RXFP4Q8TDU9 374 aa13.85□□□□□ -0.19
MRPL28-210ENST00000483764 RSG1Q9BU20 258 aa13.85□□□□□ -0.19
MRPL28-210ENST00000483764 ACTR3CQ9C0K3 210 aaPredicted RBP13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms