RNA–Protein interactions for RNA: ENST00000483541.1

NSMCE4A-210, Transcript of NSE4 homolog A, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE4A, Length 694 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE4A-210ENST00000483541 WDR61Q9GZS3 305 aaKnown RBP1.3□□□□□ -2.2
NSMCE4A-210ENST00000483541 EFCAB1Q9HAE3 211 aa1.3□□□□□ -2.2
NSMCE4A-210ENST00000483541 CMTM6Q9NX76 183 aa1.3□□□□□ -2.2
NSMCE4A-210ENST00000483541 IL36BQ9NZH7 164 aa1.3□□□□□ -2.2
NSMCE4A-210ENST00000483541 TIMM22Q9Y584 194 aa1.3□□□□□ -2.2
NSMCE4A-210ENST00000483541 BRWD1Q9NSI6 2320 aa1.3□□□□□ -2.2
NSMCE4A-210ENST00000483541 CCDC88AQ3V6T2 1871 aa1.3□□□□□ -2.2
NSMCE4A-210ENST00000483541 TRAV7A0A075B6U4 112 aa1.29□□□□□ -2.2
NSMCE4A-210ENST00000483541 A0A1B0GVG6 124 aa1.29□□□□□ -2.2
NSMCE4A-210ENST00000483541 HMSDA8MTL9 139 aa1.29□□□□□ -2.2
NSMCE4A-210ENST00000483541 TFPTP0C1Z6 253 aa1.29□□□□□ -2.2
NSMCE4A-210ENST00000483541 SULT1A3P0DMM9 295 aa1.29□□□□□ -2.2
NSMCE4A-210ENST00000483541 SULT1A4P0DMN0 295 aa1.29□□□□□ -2.2
NSMCE4A-210ENST00000483541 HLA-DMBP28068 263 aa1.29□□□□□ -2.2
NSMCE4A-210ENST00000483541 KRTAP12-1P59990 96 aa1.29□□□□□ -2.2
NSMCE4A-210ENST00000483541 SNRPD2P62316 118 aaKnown RBP1.29□□□□□ -2.2
NSMCE4A-210ENST00000483541 SLC38A11Q08AI6 406 aa1.29□□□□□ -2.2
NSMCE4A-210ENST00000483541 GUK1Q16774 197 aa1.29□□□□□ -2.2
NSMCE4A-210ENST00000483541 LPCAT3Q6P1A2 487 aa1.29□□□□□ -2.2
NSMCE4A-210ENST00000483541 TMEM86AQ8N2M4 240 aa1.29□□□□□ -2.2
NSMCE4A-210ENST00000483541 ZNF676Q8N7Q3 588 aa1.29□□□□□ -2.2
NSMCE4A-210ENST00000483541 OR8B12Q8NGG6 310 aa1.29□□□□□ -2.2
NSMCE4A-210ENST00000483541 MCFD2Q8NI22 146 aa1.29□□□□□ -2.2
NSMCE4A-210ENST00000483541 KLK6Q92876 244 aa1.29□□□□□ -2.2
NSMCE4A-210ENST00000483541 ERMAPQ96PL5 475 aaPredicted RBP1.29□□□□□ -2.2
NSMCE4A-210ENST00000483541 CMSS1Q9BQ75 279 aaKnown RBP1.29□□□□□ -2.2
NSMCE4A-210ENST00000483541 ULBP3Q9BZM4 244 aa1.29□□□□□ -2.2
NSMCE4A-210ENST00000483541 CTNNBIP1Q9NSA3 81 aaPredicted RBP1.29□□□□□ -2.2
NSMCE4A-210ENST00000483541 SLC22A13Q9Y226 551 aa1.29□□□□□ -2.2
NSMCE4A-210ENST00000483541 PKIGQ9Y2B9 76 aa1.29□□□□□ -2.2
NSMCE4A-210ENST00000483541 NCOA1Q15788 1441 aa1.29□□□□□ -2.2
NSMCE4A-210ENST00000483541 COL5A3P25940 1745 aaPredicted RBP1.29□□□□□ -2.2
NSMCE4A-210ENST00000483541 MYH11P35749 1972 aa1.28□□□□□ -2.2
NSMCE4A-210ENST00000483541 IRGMA1A4Y4 181 aa1.28□□□□□ -2.2
NSMCE4A-210ENST00000483541 SIGLEC16A6NMB1 481 aa1.28□□□□□ -2.2
NSMCE4A-210ENST00000483541 KPNA3O00505 521 aaPredicted RBP1.28□□□□□ -2.2
NSMCE4A-210ENST00000483541 SLC22A1O15245 554 aa1.28□□□□□ -2.2
NSMCE4A-210ENST00000483541 PGLYRP1O75594 196 aaPredicted RBP1.28□□□□□ -2.2
NSMCE4A-210ENST00000483541 IGHV3-7P01780 117 aa1.28□□□□□ -2.2
NSMCE4A-210ENST00000483541 HLA-DRB1P01911 266 aa1.28□□□□□ -2.2
NSMCE4A-210ENST00000483541 C1QAP02745 245 aa1.28□□□□□ -2.2
NSMCE4A-210ENST00000483541 TCRBP04435 133 aa1.28□□□□□ -2.2
NSMCE4A-210ENST00000483541 HIST1H1TP22492 207 aaPredicted RBP1.28□□□□□ -2.2
NSMCE4A-210ENST00000483541 NFYAP23511 347 aaPredicted RBP1.28□□□□□ -2.2
NSMCE4A-210ENST00000483541 HIST1H2BOP23527 126 aa1.28□□□□□ -2.2
NSMCE4A-210ENST00000483541 HIST1H2BBP33778 126 aa1.28□□□□□ -2.2
NSMCE4A-210ENST00000483541 RPL5P46777 297 aaKnown RBP1.28□□□□□ -2.2
NSMCE4A-210ENST00000483541 HIST1H2BDP58876 126 aa1.28□□□□□ -2.2
NSMCE4A-210ENST00000483541 LSM6P62312 80 aaKnown RBP1.28□□□□□ -2.2
NSMCE4A-210ENST00000483541 HIST1H2BCP62807 126 aa1.28□□□□□ -2.2
NSMCE4A-210ENST00000483541 FADDQ13158 208 aa1.28□□□□□ -2.2
NSMCE4A-210ENST00000483541 SRSF6Q13247 344 aaKnown RBP1.28□□□□□ -2.2
NSMCE4A-210ENST00000483541 SPA17Q15506 151 aa1.28□□□□□ -2.2
NSMCE4A-210ENST00000483541 NDUFA5Q16718 116 aa1.28□□□□□ -2.2
NSMCE4A-210ENST00000483541 HIST2H2BEQ16778 126 aa1.28□□□□□ -2.2
NSMCE4A-210ENST00000483541 ACOT6Q3I5F7 207 aaPredicted RBP1.28□□□□□ -2.2
NSMCE4A-210ENST00000483541 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.28□□□□□ -2.2
NSMCE4A-210ENST00000483541 RPP25LQ8N5L8 163 aaKnown RBP1.28□□□□□ -2.2
NSMCE4A-210ENST00000483541 ANKRD29Q8N6D5 301 aa1.28□□□□□ -2.2
NSMCE4A-210ENST00000483541 OR5B17Q8NGF7 314 aa1.28□□□□□ -2.2
NSMCE4A-210ENST00000483541 HIST1H2BHQ93079 126 aa1.28□□□□□ -2.2
NSMCE4A-210ENST00000483541 CHMP6Q96FZ7 201 aa1.28□□□□□ -2.2
NSMCE4A-210ENST00000483541 C8orf76Q96K31 380 aa1.28□□□□□ -2.2
NSMCE4A-210ENST00000483541 PPP1R2P1Q96PQ5 205 aa1.28□□□□□ -2.2
NSMCE4A-210ENST00000483541 HIST1H2BNQ99877 126 aa1.28□□□□□ -2.2
NSMCE4A-210ENST00000483541 HIST1H2BMQ99879 126 aa1.28□□□□□ -2.2
NSMCE4A-210ENST00000483541 CHST6Q9GZX3 395 aa1.28□□□□□ -2.2
NSMCE4A-210ENST00000483541 C8orf4Q9NR00 106 aa1.28□□□□□ -2.2
NSMCE4A-210ENST00000483541 GLTPQ9NZD2 209 aa1.28□□□□□ -2.2
NSMCE4A-210ENST00000483541 WRNQ14191 1432 aaPredicted RBP eCLIP1.27□□□□□ -2.21
NSMCE4A-210ENST00000483541 MTUS2Q5JR59 1369 aa1.27□□□□□ -2.21
NSMCE4A-210ENST00000483541 MEIKINA0A087WXM9 373 aa1.27□□□□□ -2.21
NSMCE4A-210ENST00000483541 IGHV1-18A0A0C4DH31 117 aa1.27□□□□□ -2.21
NSMCE4A-210ENST00000483541 FABP5P3A8MUU1 101 aa1.27□□□□□ -2.21
NSMCE4A-210ENST00000483541 CRYZL1O95825 349 aa1.27□□□□□ -2.21
NSMCE4A-210ENST00000483541 PRM2P04554 102 aa1.27□□□□□ -2.21
NSMCE4A-210ENST00000483541 SERPINA7P05543 415 aa1.27□□□□□ -2.21
NSMCE4A-210ENST00000483541 DEFA4P12838 97 aa1.27□□□□□ -2.21
NSMCE4A-210ENST00000483541 EIF2B2P49770 351 aaKnown RBP1.27□□□□□ -2.21
NSMCE4A-210ENST00000483541 RANP62826 216 aaKnown RBP1.27□□□□□ -2.21
NSMCE4A-210ENST00000483541 HBA1P69905 142 aa1.27□□□□□ -2.21
NSMCE4A-210ENST00000483541 CCL20P78556 96 aa1.27□□□□□ -2.21
NSMCE4A-210ENST00000483541 MRPS15P82914 257 aaKnown RBP1.27□□□□□ -2.21
NSMCE4A-210ENST00000483541 RPL18Q07020 188 aaKnown RBP1.27□□□□□ -2.21
NSMCE4A-210ENST00000483541 EDDM3AQ14507 147 aa1.27□□□□□ -2.21
NSMCE4A-210ENST00000483541 KCNJ8Q15842 424 aa1.27□□□□□ -2.21
NSMCE4A-210ENST00000483541 TPRXLQ17RH7 258 aa1.27□□□□□ -2.21
NSMCE4A-210ENST00000483541 ZNF791Q3KP31 576 aaPredicted RBP1.27□□□□□ -2.21
NSMCE4A-210ENST00000483541 IBA57Q5T440 356 aaKnown RBP1.27□□□□□ -2.21
NSMCE4A-210ENST00000483541 AADACL3Q5VUY0 350 aa1.27□□□□□ -2.21
NSMCE4A-210ENST00000483541 RPL22L1Q6P5R6 122 aaKnown RBP1.27□□□□□ -2.21
NSMCE4A-210ENST00000483541 DYNAPQ8N1N2 210 aa1.27□□□□□ -2.21
NSMCE4A-210ENST00000483541 C10orf126Q8N4M7 172 aa1.27□□□□□ -2.21
NSMCE4A-210ENST00000483541 BORCS7Q96B45 105 aa1.27□□□□□ -2.21
NSMCE4A-210ENST00000483541 TRIM4Q9C037 500 aa1.27□□□□□ -2.21
NSMCE4A-210ENST00000483541 OR8D2Q9GZM6 311 aa1.27□□□□□ -2.21
NSMCE4A-210ENST00000483541 VCX3BQ9H321 246 aa1.27□□□□□ -2.21
NSMCE4A-210ENST00000483541 CST9LQ9H4G1 147 aa1.27□□□□□ -2.21
NSMCE4A-210ENST00000483541 CISHQ9NSE2 258 aa1.27□□□□□ -2.21
NSMCE4A-210ENST00000483541 FBXL12Q9NXK8 326 aa1.27□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms