RNA–Protein interactions for RNA: ENST00000481800.1

COL9A3-212, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 4

Gene COL9A3, Length 548 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-212ENST00000481800 RGS5O15539 181 aa13.39□□□□□ -0.27
COL9A3-212ENST00000481800 CLEC3BP05452 202 aa13.39□□□□□ -0.27
COL9A3-212ENST00000481800 ALDH3B2P48448 385 aa13.39□□□□□ -0.27
COL9A3-212ENST00000481800 CADM3Q8N126 398 aa13.39□□□□□ -0.27
COL9A3-212ENST00000481800 OR52I2Q8NH67 350 aa13.39□□□□□ -0.27
COL9A3-212ENST00000481800 LSM10Q969L4 123 aaKnown RBP13.39□□□□□ -0.27
COL9A3-212ENST00000481800 FAM212BQ9NTI7 297 aaPredicted RBP13.39□□□□□ -0.27
COL9A3-212ENST00000481800 FKBP11Q9NYL4 201 aa13.39□□□□□ -0.27
COL9A3-212ENST00000481800 MFSD2BA6NFX1 497 aa13.38□□□□□ -0.27
COL9A3-212ENST00000481800 C2orf70A6NJV1 201 aa13.38□□□□□ -0.27
COL9A3-212ENST00000481800 TPPPO94811 219 aa13.38□□□□□ -0.27
COL9A3-212ENST00000481800 FOLR2P14207 255 aa13.38□□□□□ -0.27
COL9A3-212ENST00000481800 PGAM2P15259 253 aa13.38□□□□□ -0.27
COL9A3-212ENST00000481800 MECP2P51608 486 aaKnown RBP13.38□□□□□ -0.27
COL9A3-212ENST00000481800 CD300EQ496F6 205 aaPredicted RBP13.38□□□□□ -0.27
COL9A3-212ENST00000481800 SLC25A24Q6NUK1 477 aa13.38□□□□□ -0.27
COL9A3-212ENST00000481800 GDPD1Q8N9F7 314 aa13.38□□□□□ -0.27
COL9A3-212ENST00000481800 RCHY1Q96PM5 261 aa13.38□□□□□ -0.27
COL9A3-212ENST00000481800 TUBA4BQ9H853 241 aa13.38□□□□□ -0.27
COL9A3-212ENST00000481800 NDUFA4L2Q9NRX3 87 aa13.38□□□□□ -0.27
COL9A3-212ENST00000481800 IZUMO1RA6ND01 250 aa13.37□□□□□ -0.27
COL9A3-212ENST00000481800 A8MZ25 164 aa13.37□□□□□ -0.27
COL9A3-212ENST00000481800 CD3DP04234 171 aa13.37□□□□□ -0.27
COL9A3-212ENST00000481800 SERPINE2P07093 398 aa13.37□□□□□ -0.27
COL9A3-212ENST00000481800 PTBP1P26599 531 aaKnown RBP eCLIP13.37□□□□□ -0.27
COL9A3-212ENST00000481800 WT1-ASQ06250 92 aa13.37□□□□□ -0.27
COL9A3-212ENST00000481800 ADAMTSL5Q6ZMM2 481 aa13.37□□□□□ -0.27
COL9A3-212ENST00000481800 H2BFWTQ7Z2G1 175 aa13.37□□□□□ -0.27
COL9A3-212ENST00000481800 CLVS1Q8IUQ0 354 aaPredicted RBP13.37□□□□□ -0.27
COL9A3-212ENST00000481800 ARRDC1Q8N5I2 433 aa13.37□□□□□ -0.27
COL9A3-212ENST00000481800 OR5B3Q8NH48 314 aa13.37□□□□□ -0.27
COL9A3-212ENST00000481800 TMEM56Q96MV1 263 aa13.37□□□□□ -0.27
COL9A3-212ENST00000481800 C19orf73Q9NVV2 129 aa13.37□□□□□ -0.27
COL9A3-212ENST00000481800 TECRQ9NZ01 308 aaKnown RBP13.37□□□□□ -0.27
COL9A3-212ENST00000481800 MTFP1Q9UDX5 166 aa13.37□□□□□ -0.27
COL9A3-212ENST00000481800 SORL1Q92673 2214 aa13.37□□□□□ -0.27
COL9A3-212ENST00000481800 TBPP20226 339 aa13.36□□□□□ -0.27
COL9A3-212ENST00000481800 GPR183P32249 361 aa13.36□□□□□ -0.27
COL9A3-212ENST00000481800 SPCS2Q15005 226 aa13.36□□□□□ -0.27
COL9A3-212ENST00000481800 DEFB114Q30KQ6 69 aa13.36□□□□□ -0.27
COL9A3-212ENST00000481800 PLET1Q6UQ28 207 aa13.36□□□□□ -0.27
COL9A3-212ENST00000481800 OR4A16Q8NH70 328 aa13.36□□□□□ -0.27
COL9A3-212ENST00000481800 ZNF502Q8TBZ5 544 aa13.36□□□□□ -0.27
COL9A3-212ENST00000481800 VN1R17PQ8TDU5 208 aa13.36□□□□□ -0.27
COL9A3-212ENST00000481800 ZNF486Q96H40 463 aaPredicted RBP13.36□□□□□ -0.27
COL9A3-212ENST00000481800 ABHD1Q96SE0 405 aa13.36□□□□□ -0.27
COL9A3-212ENST00000481800 ZC4H2Q9NQZ6 224 aa13.36□□□□□ -0.27
COL9A3-212ENST00000481800 COL7A1Q02388 2944 aa13.35□□□□□ -0.27
COL9A3-212ENST00000481800 CBLN1P23435 193 aa13.35□□□□□ -0.27
COL9A3-212ENST00000481800 CD81P60033 236 aa13.35□□□□□ -0.27
COL9A3-212ENST00000481800 GUCA2BQ16661 112 aa13.35□□□□□ -0.27
COL9A3-212ENST00000481800 LAX1Q8IWV1 398 aa13.35□□□□□ -0.27
COL9A3-212ENST00000481800 OR1L6Q8NGR2 347 aa13.35□□□□□ -0.27
COL9A3-212ENST00000481800 RAB2BQ8WUD1 216 aa13.35□□□□□ -0.27
COL9A3-212ENST00000481800 THAP7Q9BT49 309 aaPredicted RBP13.35□□□□□ -0.27
COL9A3-212ENST00000481800 PALMDQ9NP74 551 aa13.35□□□□□ -0.27
COL9A3-212ENST00000481800 SLC2A8Q9NY64 477 aa13.35□□□□□ -0.27
COL9A3-212ENST00000481800 F11RQ9Y624 299 aaKnown RBP13.35□□□□□ -0.27
COL9A3-212ENST00000481800 C15orf61A6NNL5 157 aa13.34□□□□□ -0.27
COL9A3-212ENST00000481800 TAS2R19P59542 299 aa13.34□□□□□ -0.27
COL9A3-212ENST00000481800 RND3P61587 244 aa13.34□□□□□ -0.27
COL9A3-212ENST00000481800 MRPS10P82664 201 aaKnown RBP13.34□□□□□ -0.27
COL9A3-212ENST00000481800 TMEM229BQ8NBD8 167 aa13.34□□□□□ -0.27
COL9A3-212ENST00000481800 MRGPRFQ96AM1 343 aa13.34□□□□□ -0.27
COL9A3-212ENST00000481800 SEC22AQ96IW7 307 aa13.34□□□□□ -0.27
COL9A3-212ENST00000481800 MIXL1Q9H2W2 232 aa13.34□□□□□ -0.27
COL9A3-212ENST00000481800 TMEM14BQ9NUH8 114 aa13.34□□□□□ -0.27
COL9A3-212ENST00000481800 A8MWP6 167 aa13.33□□□□□ -0.28
COL9A3-212ENST00000481800 GABARAPH6UMI1 98 aa13.33□□□□□ -0.28
COL9A3-212ENST00000481800 CTDSP2O14595 271 aa13.33□□□□□ -0.28
COL9A3-212ENST00000481800 NOL3O60936 208 aaKnown RBP13.33□□□□□ -0.28
COL9A3-212ENST00000481800 RAB3DO95716 219 aa13.33□□□□□ -0.28
COL9A3-212ENST00000481800 PI3P19957 117 aa13.33□□□□□ -0.28
COL9A3-212ENST00000481800 EDN2P20800 178 aa13.33□□□□□ -0.28
COL9A3-212ENST00000481800 PPP5CP53041 499 aa13.33□□□□□ -0.28
COL9A3-212ENST00000481800 PIGPP57054 158 aa13.33□□□□□ -0.28
COL9A3-212ENST00000481800 SCGB2B2Q4G0G5 96 aa13.33□□□□□ -0.28
COL9A3-212ENST00000481800 ZNF57Q68EA5 555 aaPredicted RBP13.33□□□□□ -0.28
COL9A3-212ENST00000481800 STEAP1BQ6NZ63 245 aa13.33□□□□□ -0.28
COL9A3-212ENST00000481800 LHFPL1Q86WI0 220 aa13.33□□□□□ -0.28
COL9A3-212ENST00000481800 ZFAND1Q8TCF1 268 aa13.33□□□□□ -0.28
COL9A3-212ENST00000481800 CACNG8Q8WXS5 425 aa13.33□□□□□ -0.28
COL9A3-212ENST00000481800 NEURL2Q9BR09 285 aa13.33□□□□□ -0.28
COL9A3-212ENST00000481800 COPZ2Q9P299 210 aa13.33□□□□□ -0.28
COL9A3-212ENST00000481800 UFC1Q9Y3C8 167 aa13.33□□□□□ -0.28
COL9A3-212ENST00000481800 IGHV3-21A0A0B4J1V1 117 aa13.32□□□□□ -0.28
COL9A3-212ENST00000481800 IGHV3-35A0A0C4DH35 117 aa13.32□□□□□ -0.28
COL9A3-212ENST00000481800 TMEM213A2RRL7 107 aa13.32□□□□□ -0.28
COL9A3-212ENST00000481800 OR2T8A6NH00 312 aa13.32□□□□□ -0.28
COL9A3-212ENST00000481800 DBX1A6NMT0 343 aa13.32□□□□□ -0.28
COL9A3-212ENST00000481800 ZNF785A8K8V0 405 aa13.32□□□□□ -0.28
COL9A3-212ENST00000481800 TGOLN2O43493 480 aa13.32□□□□□ -0.28
COL9A3-212ENST00000481800 ATG12O94817 140 aa13.32□□□□□ -0.28
COL9A3-212ENST00000481800 IGKV1-39P01597 117 aa13.32□□□□□ -0.28
COL9A3-212ENST00000481800 IGKV1D-39P04432 117 aa13.32□□□□□ -0.28
COL9A3-212ENST00000481800 TMBIM6P55061 237 aa13.32□□□□□ -0.28
COL9A3-212ENST00000481800 SSBP1Q04837 148 aaKnown RBP13.32□□□□□ -0.28
COL9A3-212ENST00000481800 CCDC71LQ8N9Z2 235 aa13.32□□□□□ -0.28
COL9A3-212ENST00000481800 UXS1Q8NBZ7 420 aa13.32□□□□□ -0.28
COL9A3-212ENST00000481800 TERB2Q8NHR7 220 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms