RNA–Protein interactions for RNA: ENST00000481708.1

SMC6-208, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 3,897 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-208ENST00000481708 SULT1A3P0DMM9 295 aa2.32□□□□□ -2.04
SMC6-208ENST00000481708 SULT1A4P0DMN0 295 aa2.32□□□□□ -2.04
SMC6-208ENST00000481708 HIST1H1TP22492 207 aaPredicted RBP2.32□□□□□ -2.04
SMC6-208ENST00000481708 SLCO1A2P46721 670 aa2.32□□□□□ -2.04
SMC6-208ENST00000481708 SLC25A1P53007 311 aa2.32□□□□□ -2.04
SMC6-208ENST00000481708 LOXL1Q08397 574 aaPredicted RBP2.32□□□□□ -2.04
SMC6-208ENST00000481708 DAZ2Q13117 558 aaKnown RBP2.32□□□□□ -2.04
SMC6-208ENST00000481708 IGFBP7Q16270 282 aa2.32□□□□□ -2.04
SMC6-208ENST00000481708 TMEM179BQ7Z7N9 219 aa2.32□□□□□ -2.04
SMC6-208ENST00000481708 DAZ4Q86SG3 579 aaKnown RBP2.32□□□□□ -2.04
SMC6-208ENST00000481708 OR2M4Q96R27 311 aa2.32□□□□□ -2.04
SMC6-208ENST00000481708 DAZ1Q9NQZ3 744 aaKnown RBP2.32□□□□□ -2.04
SMC6-208ENST00000481708 DAZ3Q9NR90 486 aaKnown RBP2.32□□□□□ -2.04
SMC6-208ENST00000481708 TLN2Q9Y4G6 2542 aa2.32□□□□□ -2.04
SMC6-208ENST00000481708 ATRQ13535 2644 aa2.32□□□□□ -2.04
SMC6-208ENST00000481708 IGHV5-51A0A0C4DH38 117 aa2.32□□□□□ -2.04
SMC6-208ENST00000481708 IGKV1-12A0A0C4DH73 117 aa2.32□□□□□ -2.04
SMC6-208ENST00000481708 UPK1BO75841 260 aa2.32□□□□□ -2.04
SMC6-208ENST00000481708 IGKV1D-12P01611 117 aa2.32□□□□□ -2.04
SMC6-208ENST00000481708 FABP3P05413 133 aa2.32□□□□□ -2.04
SMC6-208ENST00000481708 GIPP09681 153 aaPredicted RBP2.32□□□□□ -2.04
SMC6-208ENST00000481708 LINC00614P0C842 121 aa2.32□□□□□ -2.04
SMC6-208ENST00000481708 LHX2P50458 406 aa2.32□□□□□ -2.04
SMC6-208ENST00000481708 SYNJ2BPP57105 145 aa2.32□□□□□ -2.04
SMC6-208ENST00000481708 GNG5P63218 68 aa2.32□□□□□ -2.04
SMC6-208ENST00000481708 ZNF791Q3KP31 576 aaPredicted RBP2.32□□□□□ -2.04
SMC6-208ENST00000481708 ATP5L2Q7Z4Y8 100 aa2.32□□□□□ -2.04
SMC6-208ENST00000481708 ZNF664Q8N3J9 261 aa2.32□□□□□ -2.04
SMC6-208ENST00000481708 C10orf82Q8WW14 230 aa2.32□□□□□ -2.04
SMC6-208ENST00000481708 BORCS5Q969J3 196 aa2.32□□□□□ -2.04
SMC6-208ENST00000481708 C6orf62Q9GZU0 229 aaPredicted RBP2.32□□□□□ -2.04
SMC6-208ENST00000481708 COMMD9Q9P000 198 aa2.32□□□□□ -2.04
SMC6-208ENST00000481708 HEBP2Q9Y5Z4 205 aa2.32□□□□□ -2.04
SMC6-208ENST00000481708 NSD1Q96L73 2696 aaPredicted RBP2.32□□□□□ -2.04
SMC6-208ENST00000481708 DSCAMO60469 2012 aa2.32□□□□□ -2.04
SMC6-208ENST00000481708 IGHV3OR16-10A0A075B7F0 116 aa2.31□□□□□ -2.04
SMC6-208ENST00000481708 FAM172BPA6NC97 362 aa2.31□□□□□ -2.04
SMC6-208ENST00000481708 GALR3O60755 368 aaPredicted RBP2.31□□□□□ -2.04
SMC6-208ENST00000481708 SUPT3HO75486 399 aa2.31□□□□□ -2.04
SMC6-208ENST00000481708 IGKV3-11P04433 115 aa2.31□□□□□ -2.04
SMC6-208ENST00000481708 PGAM2P15259 253 aa2.31□□□□□ -2.04
SMC6-208ENST00000481708 COX7A1P24310 79 aa2.31□□□□□ -2.04
SMC6-208ENST00000481708 RAB25P57735 213 aa2.31□□□□□ -2.04
SMC6-208ENST00000481708 GRB2P62993 217 aaKnown RBP2.31□□□□□ -2.04
SMC6-208ENST00000481708 GINS1Q14691 196 aa2.31□□□□□ -2.04
SMC6-208ENST00000481708 POU6F1Q14863 301 aa2.31□□□□□ -2.04
SMC6-208ENST00000481708 FAM201AQ5SY85 155 aa2.31□□□□□ -2.04
SMC6-208ENST00000481708 TNFAIP8L2Q6P589 184 aaPredicted RBP2.31□□□□□ -2.04
SMC6-208ENST00000481708 MS4A8Q9BY19 250 aa2.31□□□□□ -2.04
SMC6-208ENST00000481708 DSCAML1Q8TD84 2053 aa2.31□□□□□ -2.04
SMC6-208ENST00000481708 NIPBLQ6KC79 2804 aaeCLIP2.31□□□□□ -2.041e-8■□□□□ 9.7
SMC6-208ENST00000481708 IGSF23A1L1A6 192 aa2.31□□□□□ -2.04
SMC6-208ENST00000481708 TMEM250H0YL14 139 aa2.31□□□□□ -2.04
SMC6-208ENST00000481708 LGALS9O00182 355 aa2.31□□□□□ -2.04
SMC6-208ENST00000481708 KPNA4O00629 521 aaPredicted RBP2.31□□□□□ -2.04
SMC6-208ENST00000481708 NOS1APO75052 506 aaPredicted RBP2.31□□□□□ -2.04
SMC6-208ENST00000481708 YIF1AO95070 293 aa2.31□□□□□ -2.04
SMC6-208ENST00000481708 RAB3BP20337 219 aa2.31□□□□□ -2.04
SMC6-208ENST00000481708 PSMD8P48556 350 aa2.31□□□□□ -2.04
SMC6-208ENST00000481708 CMC4P56277 68 aaPredicted RBP2.31□□□□□ -2.04
SMC6-208ENST00000481708 RAB2AP61019 212 aa2.31□□□□□ -2.04
SMC6-208ENST00000481708 ELF3P78545 371 aaPredicted RBP2.31□□□□□ -2.04
SMC6-208ENST00000481708 CLEC12BQ2HXU8 276 aa2.31□□□□□ -2.04
SMC6-208ENST00000481708 DEFB125Q8N687 156 aa2.31□□□□□ -2.04
SMC6-208ENST00000481708 NPBQ8NG41 125 aa2.31□□□□□ -2.04
SMC6-208ENST00000481708 OR2M3Q8NG83 312 aa2.31□□□□□ -2.04
SMC6-208ENST00000481708 ABHD3Q8WU67 409 aa2.31□□□□□ -2.04
SMC6-208ENST00000481708 SEH1LQ96EE3 360 aa2.31□□□□□ -2.04
SMC6-208ENST00000481708 OPTCQ9UBM4 332 aa2.31□□□□□ -2.04
SMC6-208ENST00000481708 SLC23A2Q9UGH3 650 aa2.31□□□□□ -2.04
SMC6-208ENST00000481708 WSB1Q9Y6I7 421 aa2.31□□□□□ -2.04
SMC6-208ENST00000481708 USP9YO00507 2555 aaPredicted RBP2.31□□□□□ -2.04
SMC6-208ENST00000481708 IGKV1-6A0A0C4DH72 117 aa2.31□□□□□ -2.04
SMC6-208ENST00000481708 SERPINA7P05543 415 aa2.31□□□□□ -2.04
SMC6-208ENST00000481708 OR56A5P0C7T3 313 aa2.31□□□□□ -2.04
SMC6-208ENST00000481708 CCR6P51684 374 aa2.31□□□□□ -2.04
SMC6-208ENST00000481708 BTN1A1Q13410 526 aa2.31□□□□□ -2.04
SMC6-208ENST00000481708 BEST4Q8NFU0 473 aa2.31□□□□□ -2.04
SMC6-208ENST00000481708 OR8J3Q8NGG0 315 aa2.31□□□□□ -2.04
SMC6-208ENST00000481708 OR5J2Q8NH18 312 aa2.31□□□□□ -2.04
SMC6-208ENST00000481708 RNASE6Q93091 150 aaKnown RBP2.31□□□□□ -2.04
SMC6-208ENST00000481708 REEP6Q96HR9 211 aa2.31□□□□□ -2.04
SMC6-208ENST00000481708 ENPP4Q9Y6X5 453 aa2.31□□□□□ -2.04
SMC6-208ENST00000481708 A0A0G2JMP0 313 aa2.3□□□□□ -2.04
SMC6-208ENST00000481708 PEX7O00628 323 aa2.3□□□□□ -2.04
SMC6-208ENST00000481708 HTR1AP08908 422 aa2.3□□□□□ -2.04
SMC6-208ENST00000481708 IDO1P14902 403 aa2.3□□□□□ -2.04
SMC6-208ENST00000481708 HLA-DRB3P79483 266 aa2.3□□□□□ -2.04
SMC6-208ENST00000481708 DEFA6Q01524 100 aa2.3□□□□□ -2.04
SMC6-208ENST00000481708 BIKQ13323 160 aa2.3□□□□□ -2.04
SMC6-208ENST00000481708 QPRTQ15274 297 aa2.3□□□□□ -2.04
SMC6-208ENST00000481708 DEFB113Q30KQ7 82 aa2.3□□□□□ -2.04
SMC6-208ENST00000481708 ZFP69Q49AA0 526 aa2.3□□□□□ -2.04
SMC6-208ENST00000481708 DEFB106AQ8N104 65 aa2.3□□□□□ -2.04
SMC6-208ENST00000481708 C12orf45Q8N5I9 185 aaPredicted RBP2.3□□□□□ -2.04
SMC6-208ENST00000481708 APCDD1LQ8NCL9 501 aa2.3□□□□□ -2.04
SMC6-208ENST00000481708 OR4M2Q8NGB6 313 aa2.3□□□□□ -2.04
SMC6-208ENST00000481708 NPRL2Q8WTW4 380 aa2.3□□□□□ -2.04
SMC6-208ENST00000481708 MAL2Q969L2 176 aa2.3□□□□□ -2.04
SMC6-208ENST00000481708 LYZL4Q96KX0 146 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms