RNA–Protein interactions for RNA: ENST00000481385.6

PHF3-204, Transcript of PHD finger protein 3, humanhuman

TSL 2

Gene PHF3, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-204ENST00000481385 TNFRSF1AP19438 455 aa11.46□□□□□ -0.57
PHF3-204ENST00000481385 B2MP61769 119 aa11.46□□□□□ -0.57
PHF3-204ENST00000481385 TMEM200BQ69YZ2 307 aa11.46□□□□□ -0.57
PHF3-204ENST00000481385 CDPF1Q6NVV7 123 aa11.46□□□□□ -0.57
PHF3-204ENST00000481385 SPACA3Q8IXA5 215 aa11.46□□□□□ -0.57
PHF3-204ENST00000481385 STPG3Q8N7X2 389 aa11.46□□□□□ -0.57
PHF3-204ENST00000481385 WFIKKN1Q96NZ8 548 aa11.46□□□□□ -0.57
PHF3-204ENST00000481385 SAA1P0DJI8 122 aaPredicted RBP11.46□□□□□ -0.58
PHF3-204ENST00000481385 ADTRPQ96IZ2 230 aa11.46□□□□□ -0.58
PHF3-204ENST00000481385 SSUH2Q9Y2M2 353 aa11.46□□□□□ -0.58
PHF3-204ENST00000481385 CSMD1Q96PZ7 3565 aa11.46□□□□□ -0.58
PHF3-204ENST00000481385 SVEP1Q4LDE5 3571 aa11.46□□□□□ -0.58
PHF3-204ENST00000481385 TRBV20OR9-2A0A075B6H5 130 aa11.45□□□□□ -0.58
PHF3-204ENST00000481385 IGKV1OR2-108A0A075B7D4 117 aa11.45□□□□□ -0.58
PHF3-204ENST00000481385 TMEM178BH3BS89 294 aa11.45□□□□□ -0.58
PHF3-204ENST00000481385 J3QR06 171 aa11.45□□□□□ -0.58
PHF3-204ENST00000481385 UPK2O00526 184 aa11.45□□□□□ -0.58
PHF3-204ENST00000481385 HRASP01112 189 aa11.45□□□□□ -0.58
PHF3-204ENST00000481385 GALR1P47211 349 aa11.45□□□□□ -0.58
PHF3-204ENST00000481385 FOXC1Q12948 553 aa11.45□□□□□ -0.58
PHF3-204ENST00000481385 EFNB3Q15768 340 aa11.45□□□□□ -0.58
PHF3-204ENST00000481385 TBR1Q16650 682 aa11.45□□□□□ -0.58
PHF3-204ENST00000481385 MLANAQ16655 118 aa11.45□□□□□ -0.58
PHF3-204ENST00000481385 ZNF833PQ6ZTB9 187 aa11.45□□□□□ -0.58
PHF3-204ENST00000481385 OR10W1Q8NGF6 305 aa11.45□□□□□ -0.58
PHF3-204ENST00000481385 GPR61Q9BZJ8 451 aa11.45□□□□□ -0.58
PHF3-204ENST00000481385 GSN-AS1Q9NRJ2 163 aa11.45□□□□□ -0.58
PHF3-204ENST00000481385 CTSZQ9UBR2 303 aa11.45□□□□□ -0.58
PHF3-204ENST00000481385 ZNF835Q9Y2P0 537 aa11.45□□□□□ -0.58
PHF3-204ENST00000481385 YTHDF2Q9Y5A9 579 aaKnown RBP11.45□□□□□ -0.58
PHF3-204ENST00000481385 TEX50A0A1B0GTY4 177 aa11.45□□□□□ -0.58
PHF3-204ENST00000481385 NKX6-3A6NJ46 265 aa11.45□□□□□ -0.58
PHF3-204ENST00000481385 H7BYZ3 331 aa11.45□□□□□ -0.58
PHF3-204ENST00000481385 TMEM249Q2WGJ8 235 aa11.45□□□□□ -0.58
PHF3-204ENST00000481385 TEPPQ6URK8 271 aa11.45□□□□□ -0.58
PHF3-204ENST00000481385 LINC01551Q86U37 167 aa11.45□□□□□ -0.58
PHF3-204ENST00000481385 PYGO2Q9BRQ0 406 aa11.45□□□□□ -0.58
PHF3-204ENST00000481385 TCEAL7Q9BRU2 100 aa11.45□□□□□ -0.58
PHF3-204ENST00000481385 E7EUB6 86 aa11.45□□□□□ -0.58
PHF3-204ENST00000481385 PRCDQ00LT1 54 aa11.45□□□□□ -0.58
PHF3-204ENST00000481385 PYY3Q5JQD4 70 aa11.45□□□□□ -0.58
PHF3-204ENST00000481385 DMRTC2Q8IXT2 367 aaPredicted RBP11.45□□□□□ -0.58
PHF3-204ENST00000481385 HIST3H2BBQ8N257 126 aa11.45□□□□□ -0.58
PHF3-204ENST00000481385 OR4X1Q8NH49 305 aa11.45□□□□□ -0.58
PHF3-204ENST00000481385 PCGF1Q9BSM1 259 aa11.45□□□□□ -0.58
PHF3-204ENST00000481385 ENY2Q9NPA8 101 aa11.45□□□□□ -0.58
PHF3-204ENST00000481385 LINC00587B1AMM8 73 aa11.44□□□□□ -0.58
PHF3-204ENST00000481385 C1QTNF9P0C862 333 aa11.44□□□□□ -0.58
PHF3-204ENST00000481385 CHRNA7P36544 502 aa11.44□□□□□ -0.58
PHF3-204ENST00000481385 OR10A7Q8NGE5 316 aa11.44□□□□□ -0.58
PHF3-204ENST00000481385 H1FXQ92522 213 aaKnown RBP11.44□□□□□ -0.58
PHF3-204ENST00000481385 ZNF714Q96N38 554 aa11.44□□□□□ -0.58
PHF3-204ENST00000481385 PRNDQ9UKY0 176 aa11.44□□□□□ -0.58
PHF3-204ENST00000481385 PPIAL4EA0A075B759 164 aa11.44□□□□□ -0.58
PHF3-204ENST00000481385 SCO2A0A1W2PP80 73 aa11.44□□□□□ -0.58
PHF3-204ENST00000481385 SHISA9B4DS77 424 aa11.44□□□□□ -0.58
PHF3-204ENST00000481385 PPIAL4DF5H284 164 aa11.44□□□□□ -0.58
PHF3-204ENST00000481385 TNFRSF13BO14836 293 aaPredicted RBP11.44□□□□□ -0.58
PHF3-204ENST00000481385 PPIAL4FP0DN26 164 aa11.44□□□□□ -0.58
PHF3-204ENST00000481385 GATA2P23769 480 aaPredicted RBP11.44□□□□□ -0.58
PHF3-204ENST00000481385 RTL8BQ17RB0 113 aa11.44□□□□□ -0.58
PHF3-204ENST00000481385 PLEKHA3Q9HB20 300 aa11.44□□□□□ -0.58
PHF3-204ENST00000481385 KCNIP2Q9NS61 270 aa11.44□□□□□ -0.58
PHF3-204ENST00000481385 PPIAL4AQ9Y536 164 aa11.44□□□□□ -0.58
PHF3-204ENST00000481385 A0A1W2PPQ1 181 aa11.43□□□□□ -0.58
PHF3-204ENST00000481385 E7EQL1 145 aa11.43□□□□□ -0.58
PHF3-204ENST00000481385 H0YJW9 148 aa11.43□□□□□ -0.58
PHF3-204ENST00000481385 PDE6DO43924 150 aa11.43□□□□□ -0.58
PHF3-204ENST00000481385 FABP1P07148 127 aa11.43□□□□□ -0.58
PHF3-204ENST00000481385 LINC00869P0C866 280 aa11.43□□□□□ -0.58
PHF3-204ENST00000481385 CHRNB4P30926 498 aa11.43□□□□□ -0.58
PHF3-204ENST00000481385 PRR20EP86478 221 aa11.43□□□□□ -0.58
PHF3-204ENST00000481385 PRR20CP86479 221 aa11.43□□□□□ -0.58
PHF3-204ENST00000481385 PRR20DP86480 221 aa11.43□□□□□ -0.58
PHF3-204ENST00000481385 PRR20BP86481 221 aa11.43□□□□□ -0.58
PHF3-204ENST00000481385 PRR20AP86496 221 aa11.43□□□□□ -0.58
PHF3-204ENST00000481385 PRSS8Q16651 343 aa11.43□□□□□ -0.58
PHF3-204ENST00000481385 GAL3ST2Q9H3Q3 398 aa11.43□□□□□ -0.58
PHF3-204ENST00000481385 TMEM106BQ9NUM4 274 aa11.43□□□□□ -0.58
PHF3-204ENST00000481385 MIOXQ9UGB7 285 aa11.43□□□□□ -0.58
PHF3-204ENST00000481385 PTPRQQ9UMZ3 2332 aa11.43□□□□□ -0.58
PHF3-204ENST00000481385 CXorf1O96002 111 aa11.43□□□□□ -0.58
PHF3-204ENST00000481385 FAM87AP0C7U9 286 aa11.43□□□□□ -0.58
PHF3-204ENST00000481385 RNASE6Q93091 150 aaKnown RBP11.43□□□□□ -0.58
PHF3-204ENST00000481385 LRFN3Q9BTN0 628 aa11.43□□□□□ -0.58
PHF3-204ENST00000481385 SRD5A3Q9H8P0 318 aa11.43□□□□□ -0.58
PHF3-204ENST00000481385 ZNF257Q9Y2Q1 563 aa11.43□□□□□ -0.58
PHF3-204ENST00000481385 NDUFS6O75380 124 aaKnown RBP11.42□□□□□ -0.58
PHF3-204ENST00000481385 ACTL6BO94805 426 aa11.42□□□□□ -0.58
PHF3-204ENST00000481385 VENTXO95231 258 aa11.42□□□□□ -0.58
PHF3-204ENST00000481385 S100A12P80511 92 aa11.42□□□□□ -0.58
PHF3-204ENST00000481385 MEF2CQ06413 473 aaPredicted RBP11.42□□□□□ -0.58
PHF3-204ENST00000481385 MIR17HGQ75NE6 70 aa11.42□□□□□ -0.58
PHF3-204ENST00000481385 SCNM1Q9BWG6 230 aa11.42□□□□□ -0.58
PHF3-204ENST00000481385 GAR1Q9NY12 217 aaKnown RBP11.42□□□□□ -0.58
PHF3-204ENST00000481385 HNF1AP20823 631 aa11.42□□□□□ -0.58
PHF3-204ENST00000481385 GCHFRP30047 84 aa11.42□□□□□ -0.58
PHF3-204ENST00000481385 RPL29P47914 159 aaKnown RBP11.42□□□□□ -0.58
PHF3-204ENST00000481385 DLX1P56177 255 aa11.42□□□□□ -0.58
PHF3-204ENST00000481385 FAM3BP58499 235 aaPredicted RBP11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 148.2 ms