RNA–Protein interactions for RNA: ENST00000480638.1

CALD1-219, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 560 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-219ENST00000480638 HIVEP1P15822 2718 aa0.83□□□□□ -2.28
CALD1-219ENST00000480638 NBPF19A0A087WUL8 3843 aa0.82□□□□□ -2.28
CALD1-219ENST00000480638 ZZEF1O43149 2961 aa0.82□□□□□ -2.28
CALD1-219ENST00000480638 STAB2Q8WWQ8 2551 aa0.82□□□□□ -2.28
CALD1-219ENST00000480638 GREB1Q4ZG55 1949 aa0.82□□□□□ -2.28
CALD1-219ENST00000480638 TMEM269A0A1B0GVZ9 245 aa0.82□□□□□ -2.28
CALD1-219ENST00000480638 TMEM213A2RRL7 107 aa0.82□□□□□ -2.28
CALD1-219ENST00000480638 MEIS3P1A6NDR6 274 aa0.82□□□□□ -2.28
CALD1-219ENST00000480638 IQCF5A8MTL0 148 aa0.82□□□□□ -2.28
CALD1-219ENST00000480638 IBA57-AS1B1ANH7 110 aa0.82□□□□□ -2.28
CALD1-219ENST00000480638 TRGC1P0CF51 173 aa0.82□□□□□ -2.28
CALD1-219ENST00000480638 CD151P48509 253 aa0.82□□□□□ -2.28
CALD1-219ENST00000480638 DMTNQ08495 405 aa0.82□□□□□ -2.28
CALD1-219ENST00000480638 DEFB115Q30KQ5 88 aa0.82□□□□□ -2.28
CALD1-219ENST00000480638 C9orf64Q5T6V5 341 aa0.82□□□□□ -2.28
CALD1-219ENST00000480638 DNM1P34Q6PK57 102 aa0.82□□□□□ -2.28
CALD1-219ENST00000480638 DYNAPQ8N1N2 210 aa0.82□□□□□ -2.28
CALD1-219ENST00000480638 OTUD6BQ8N6M0 293 aa0.82□□□□□ -2.28
CALD1-219ENST00000480638 PACRGQ96M98 296 aaPredicted RBP0.82□□□□□ -2.28
CALD1-219ENST00000480638 BBS2Q9BXC9 721 aa0.82□□□□□ -2.28
CALD1-219ENST00000480638 C22orf24Q9Y442 160 aa0.82□□□□□ -2.28
CALD1-219ENST00000480638 DCHS1Q96JQ0 3298 aa0.82□□□□□ -2.28
CALD1-219ENST00000480638 BRWD1Q9NSI6 2320 aa0.82□□□□□ -2.28
CALD1-219ENST00000480638 FLT4P35916 1363 aa0.82□□□□□ -2.28
CALD1-219ENST00000480638 EP300Q09472 2414 aaPredicted RBP0.81□□□□□ -2.28
CALD1-219ENST00000480638 COL24A1Q17RW2 1714 aa0.81□□□□□ -2.28
CALD1-219ENST00000480638 COL12A1Q99715 3063 aa0.81□□□□□ -2.28
CALD1-219ENST00000480638 MAP1AP78559 2803 aaPredicted RBP0.81□□□□□ -2.28
CALD1-219ENST00000480638 MYO15AQ9UKN7 3530 aa0.81□□□□□ -2.28
CALD1-219ENST00000480638 HSBP1L1C9JCN9 74 aa0.81□□□□□ -2.28
CALD1-219ENST00000480638 COX7A2LO14548 114 aa0.81□□□□□ -2.28
CALD1-219ENST00000480638 SCN2BO60939 215 aa0.81□□□□□ -2.28
CALD1-219ENST00000480638 APOMO95445 188 aa0.81□□□□□ -2.28
CALD1-219ENST00000480638 PPBPP02775 128 aa0.81□□□□□ -2.28
CALD1-219ENST00000480638 RPL30P62888 115 aaKnown RBP0.81□□□□□ -2.28
CALD1-219ENST00000480638 ASB13Q8WXK3 278 aa0.81□□□□□ -2.28
CALD1-219ENST00000480638 GNPNAT1Q96EK6 184 aaPredicted RBP0.81□□□□□ -2.28
CALD1-219ENST00000480638 ANKRD36BP1Q96IX9 119 aa0.81□□□□□ -2.28
CALD1-219ENST00000480638 ATP6V1G3Q96LB4 118 aa0.81□□□□□ -2.28
CALD1-219ENST00000480638 SPACA1Q9HBV2 294 aa0.81□□□□□ -2.28
CALD1-219ENST00000480638 CC2D2AQ9P2K1 1620 aa0.81□□□□□ -2.28
CALD1-219ENST00000480638 MGAM2Q2M2H8 2515 aa0.81□□□□□ -2.28
CALD1-219ENST00000480638 PIK3R4Q99570 1358 aa0.81□□□□□ -2.28
CALD1-219ENST00000480638 OTOGQ6ZRI0 2925 aa0.81□□□□□ -2.28
CALD1-219ENST00000480638 DSTQ03001 7570 aaKnown RBP0.8□□□□□ -2.28
CALD1-219ENST00000480638 FRYLO94915 3013 aa0.8□□□□□ -2.28
CALD1-219ENST00000480638 SMARCA4P51532 1647 aa0.8□□□□□ -2.28
CALD1-219ENST00000480638 CENPEQ02224 2701 aa0.8□□□□□ -2.28
CALD1-219ENST00000480638 ATP8B1O43520 1251 aa0.8□□□□□ -2.28
CALD1-219ENST00000480638 HCRTO43612 131 aa0.8□□□□□ -2.28
CALD1-219ENST00000480638 NAA40Q86UY6 237 aa0.8□□□□□ -2.28
CALD1-219ENST00000480638 SYCE1Q8N0S2 351 aa0.8□□□□□ -2.28
CALD1-219ENST00000480638 ACOT12Q8WYK0 555 aa0.8□□□□□ -2.28
CALD1-219ENST00000480638 TESCQ96BS2 214 aa0.8□□□□□ -2.28
CALD1-219ENST00000480638 EURLQ9NYK6 297 aa0.8□□□□□ -2.28
CALD1-219ENST00000480638 CD300AQ9UGN4 299 aa0.8□□□□□ -2.28
CALD1-219ENST00000480638 GMEB1Q9Y692 573 aa0.8□□□□□ -2.28
CALD1-219ENST00000480638 SONP18583 2426 aaKnown RBP0.8□□□□□ -2.28
CALD1-219ENST00000480638 MUC5BQ9HC84 5762 aaPredicted RBP0.8□□□□□ -2.28
CALD1-219ENST00000480638 DMXL2Q8TDJ6 3036 aa0.8□□□□□ -2.28
CALD1-219ENST00000480638 SSPOA2VEC9 5147 aa0.8□□□□□ -2.28
CALD1-219ENST00000480638 WDFY3Q8IZQ1 3526 aa0.8□□□□□ -2.28
CALD1-219ENST00000480638 DMXL1Q9Y485 3027 aa0.79□□□□□ -2.28
CALD1-219ENST00000480638 IGKV1-9A0A0C4DH69 117 aa0.79□□□□□ -2.28
CALD1-219ENST00000480638 TRPC5OSA6NMA1 111 aa0.79□□□□□ -2.28
CALD1-219ENST00000480638 PET100P0DJ07 73 aa0.79□□□□□ -2.28
CALD1-219ENST00000480638 UMODL1-AS1Q8N2C9 162 aa0.79□□□□□ -2.28
CALD1-219ENST00000480638 OR8B3Q8NGG8 313 aa0.79□□□□□ -2.28
CALD1-219ENST00000480638 LLPHQ9BRT6 129 aaKnown RBP0.79□□□□□ -2.28
CALD1-219ENST00000480638 XAGE1AQ9HD64 81 aa0.79□□□□□ -2.28
CALD1-219ENST00000480638 HRASLSQ9HDD0 168 aa0.79□□□□□ -2.28
CALD1-219ENST00000480638 RNF213Q63HN8 5207 aa0.79□□□□□ -2.28
CALD1-219ENST00000480638 PTPRZ1P23471 2315 aaPredicted RBP0.78□□□□□ -2.28
CALD1-219ENST00000480638 PIK3C2AO00443 1686 aa0.78□□□□□ -2.28
CALD1-219ENST00000480638 LAMB4A4D0S4 1761 aa0.78□□□□□ -2.28
CALD1-219ENST00000480638 TINCRA0A1B0GVN0 87 aa0.78□□□□□ -2.28
CALD1-219ENST00000480638 ERICH2A1L162 156 aa0.78□□□□□ -2.28
CALD1-219ENST00000480638 TRAPPC2LH3BP13 241 aa0.78□□□□□ -2.28
CALD1-219ENST00000480638 KMT2DO14686 5537 aa0.78□□□□□ -2.28
CALD1-219ENST00000480638 NSA2O95478 260 aaKnown RBP0.78□□□□□ -2.28
CALD1-219ENST00000480638 HIST1H1CP16403 213 aaKnown RBP0.78□□□□□ -2.28
CALD1-219ENST00000480638 MSNP26038 577 aaKnown RBP0.78□□□□□ -2.28
CALD1-219ENST00000480638 CD40LGP29965 261 aa0.78□□□□□ -2.28
CALD1-219ENST00000480638 FAM27BQ5VT28 67 aa0.78□□□□□ -2.28
CALD1-219ENST00000480638 SDHAF4Q5VUM1 108 aa0.78□□□□□ -2.28
CALD1-219ENST00000480638 PDPK2PQ6A1A2 396 aa0.78□□□□□ -2.28
CALD1-219ENST00000480638 CLEC6AQ6EIG7 209 aa0.78□□□□□ -2.28
CALD1-219ENST00000480638 SBSNQ6UWP8 590 aa0.78□□□□□ -2.28
CALD1-219ENST00000480638 FAM19A5Q7Z5A7 132 aaPredicted RBP0.78□□□□□ -2.28
CALD1-219ENST00000480638 CD302Q8IX05 232 aa0.78□□□□□ -2.28
CALD1-219ENST00000480638 REG4Q9BYZ8 158 aa0.78□□□□□ -2.28
CALD1-219ENST00000480638 UPF3BQ9BZI7 483 aaKnown RBP0.78□□□□□ -2.28
CALD1-219ENST00000480638 DERL2Q9GZP9 239 aa0.78□□□□□ -2.28
CALD1-219ENST00000480638 PRELID1Q9Y255 219 aa0.78□□□□□ -2.28
CALD1-219ENST00000480638 TIMM22Q9Y584 194 aa0.78□□□□□ -2.28
CALD1-219ENST00000480638 LHFPL6Q9Y693 200 aa0.78□□□□□ -2.28
CALD1-219ENST00000480638 FREM2Q5SZK8 3169 aa0.78□□□□□ -2.28
CALD1-219ENST00000480638 DNAH14Q0VDD8 3507 aa0.78□□□□□ -2.28
CALD1-219ENST00000480638 MDN1Q9NU22 5596 aa0.78□□□□□ -2.29
CALD1-219ENST00000480638 PSMB6P28072 239 aa0.77□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms