RNA–Protein interactions for RNA: ENST00000480102.1

PTCD3-213, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-213ENST00000480102 SOX15O60248 233 aa3.78□□□□□ -1.8
PTCD3-213ENST00000480102 PGLYRP1O75594 196 aaPredicted RBP3.78□□□□□ -1.8
PTCD3-213ENST00000480102 KBTBD11O94819 623 aa3.78□□□□□ -1.8
PTCD3-213ENST00000480102 CRYZL1O95825 349 aa3.78□□□□□ -1.8
PTCD3-213ENST00000480102 HSPB1P04792 205 aaKnown RBP3.78□□□□□ -1.8
PTCD3-213ENST00000480102 FCER2P06734 321 aa3.78□□□□□ -1.8
PTCD3-213ENST00000480102 OR9G9P0C7N8 305 aa3.78□□□□□ -1.8
PTCD3-213ENST00000480102 SAA1P0DJI8 122 aaPredicted RBP3.78□□□□□ -1.8
PTCD3-213ENST00000480102 HRH1P35367 487 aa3.78□□□□□ -1.8
PTCD3-213ENST00000480102 ATP5IP56385 69 aaPredicted RBP3.78□□□□□ -1.8
PTCD3-213ENST00000480102 AP3S2P59780 193 aa3.78□□□□□ -1.8
PTCD3-213ENST00000480102 HERV-K104P61576 105 aa3.78□□□□□ -1.8
PTCD3-213ENST00000480102 RPL30P62888 115 aaKnown RBP3.78□□□□□ -1.8
PTCD3-213ENST00000480102 ZNF616Q08AN1 781 aa3.78□□□□□ -1.8
PTCD3-213ENST00000480102 PLGLAQ15195 96 aa3.78□□□□□ -1.8
PTCD3-213ENST00000480102 CNPY1Q3B7I2 92 aa3.78□□□□□ -1.8
PTCD3-213ENST00000480102 CD300EQ496F6 205 aaPredicted RBP3.78□□□□□ -1.8
PTCD3-213ENST00000480102 RNASE10Q5GAN6 216 aaKnown RBP3.78□□□□□ -1.8
PTCD3-213ENST00000480102 C9orf152Q5JTZ5 239 aa3.78□□□□□ -1.8
PTCD3-213ENST00000480102 AADACL3Q5VUY0 350 aa3.78□□□□□ -1.8
PTCD3-213ENST00000480102 PVRIGQ6DKI7 326 aa3.78□□□□□ -1.8
PTCD3-213ENST00000480102 ZNF343Q6P1L6 599 aa3.78□□□□□ -1.8
PTCD3-213ENST00000480102 ZNF818PQ6ZRF7 136 aa3.78□□□□□ -1.8
PTCD3-213ENST00000480102 ZNF329Q86UD4 541 aa3.78□□□□□ -1.8
PTCD3-213ENST00000480102 CLVS1Q8IUQ0 354 aaPredicted RBP3.78□□□□□ -1.8
PTCD3-213ENST00000480102 FAM219AQ8IW50 185 aa3.78□□□□□ -1.8
PTCD3-213ENST00000480102 SPAG16Q8N0X2 631 aa3.78□□□□□ -1.8
PTCD3-213ENST00000480102 DRAXINQ8NBI3 349 aaPredicted RBP3.78□□□□□ -1.8
PTCD3-213ENST00000480102 ZNF114Q8NC26 417 aa3.78□□□□□ -1.8
PTCD3-213ENST00000480102 ADAD2Q8NCV1 583 aaKnown RBP3.78□□□□□ -1.8
PTCD3-213ENST00000480102 NTN5Q8WTR8 489 aaPredicted RBP3.78□□□□□ -1.8
PTCD3-213ENST00000480102 SRSF12Q8WXF0 261 aaKnown RBP3.78□□□□□ -1.8
PTCD3-213ENST00000480102 DPF1Q92782 380 aa3.78□□□□□ -1.8
PTCD3-213ENST00000480102 IL22RA2Q969J5 263 aa3.78□□□□□ -1.8
PTCD3-213ENST00000480102 GALNT14Q96FL9 552 aa3.78□□□□□ -1.8
PTCD3-213ENST00000480102 SCGB3A2Q96PL1 93 aa3.78□□□□□ -1.8
PTCD3-213ENST00000480102 PRRT1Q99946 306 aa3.78□□□□□ -1.8
PTCD3-213ENST00000480102 SLC5A7Q9GZV3 580 aa3.78□□□□□ -1.8
PTCD3-213ENST00000480102 NAA50Q9GZZ1 169 aaKnown RBP3.78□□□□□ -1.8
PTCD3-213ENST00000480102 MIXL1Q9H2W2 232 aa3.78□□□□□ -1.8
PTCD3-213ENST00000480102 TMEM14BQ9NUH8 114 aa3.78□□□□□ -1.8
PTCD3-213ENST00000480102 EHFQ9NZC4 300 aa3.78□□□□□ -1.8
PTCD3-213ENST00000480102 EXTL2Q9UBQ6 330 aa3.78□□□□□ -1.8
PTCD3-213ENST00000480102 PRNDQ9UKY0 176 aa3.78□□□□□ -1.8
PTCD3-213ENST00000480102 FBXO7Q9Y3I1 522 aa3.78□□□□□ -1.8
PTCD3-213ENST00000480102 DNAH9Q9NYC9 4486 aa3.78□□□□□ -1.8
PTCD3-213ENST00000480102 WNK1Q9H4A3 2382 aa3.77□□□□□ -1.81
PTCD3-213ENST00000480102 ANKRD20A5PA0PJZ0 165 aa3.77□□□□□ -1.81
PTCD3-213ENST00000480102 SMIM30A4D0T7 59 aa3.77□□□□□ -1.81
PTCD3-213ENST00000480102 A8MZ25 164 aa3.77□□□□□ -1.81
PTCD3-213ENST00000480102 TEX22C9J3V5 150 aa3.77□□□□□ -1.81
PTCD3-213ENST00000480102 LINC01619G3V211 115 aa3.77□□□□□ -1.81
PTCD3-213ENST00000480102 LGALS9O00182 355 aa3.77□□□□□ -1.81
PTCD3-213ENST00000480102 UPK2O00526 184 aa3.77□□□□□ -1.81
PTCD3-213ENST00000480102 MPPED1O15442 326 aa3.77□□□□□ -1.81
PTCD3-213ENST00000480102 HPGDSO60760 199 aa3.77□□□□□ -1.81
PTCD3-213ENST00000480102 FCGR3BO75015 233 aa3.77□□□□□ -1.81
PTCD3-213ENST00000480102 CDS2O95674 445 aa3.77□□□□□ -1.81
PTCD3-213ENST00000480102 IFNA6P05013 189 aa3.77□□□□□ -1.81
PTCD3-213ENST00000480102 CTSDP07339 412 aaPredicted RBP3.77□□□□□ -1.81
PTCD3-213ENST00000480102 P0C879 139 aa3.77□□□□□ -1.81
PTCD3-213ENST00000480102 CTRB1P17538 263 aa3.77□□□□□ -1.81
PTCD3-213ENST00000480102 HLA-GP17693 338 aa3.77□□□□□ -1.81
PTCD3-213ENST00000480102 CNTFRP26992 372 aa3.77□□□□□ -1.81
PTCD3-213ENST00000480102 FAUP35544 74 aaKnown RBP3.77□□□□□ -1.81
PTCD3-213ENST00000480102 TGFBR1P36897 503 aa3.77□□□□□ -1.81
PTCD3-213ENST00000480102 RFX2P48378 723 aa3.77□□□□□ -1.81
PTCD3-213ENST00000480102 ELLP55199 621 aaPredicted RBP3.77□□□□□ -1.81
PTCD3-213ENST00000480102 OR2B8PP59922 312 aa3.77□□□□□ -1.81
PTCD3-213ENST00000480102 ERVK-16P61578 105 aa3.77□□□□□ -1.81
PTCD3-213ENST00000480102 TSPAN5P62079 268 aa3.77□□□□□ -1.81
PTCD3-213ENST00000480102 LSM3P62310 102 aaKnown RBP3.77□□□□□ -1.81
PTCD3-213ENST00000480102 SPCS2Q15005 226 aa3.77□□□□□ -1.81
PTCD3-213ENST00000480102 ZNF585BQ52M93 769 aa3.77□□□□□ -1.81
PTCD3-213ENST00000480102 C9orf66Q5T8R8 295 aa3.77□□□□□ -1.81
PTCD3-213ENST00000480102 ASPHD1Q5U4P2 390 aa3.77□□□□□ -1.81
PTCD3-213ENST00000480102 CTRB2Q6GPI1 263 aa3.77□□□□□ -1.81
PTCD3-213ENST00000480102 OR4A47Q6IF82 309 aa3.77□□□□□ -1.81
PTCD3-213ENST00000480102 STEAP1BQ6NZ63 245 aa3.77□□□□□ -1.81
PTCD3-213ENST00000480102 GLDNQ6ZMI3 551 aaPredicted RBP3.77□□□□□ -1.81
PTCD3-213ENST00000480102 C5orf24Q7Z6I8 188 aa3.77□□□□□ -1.81
PTCD3-213ENST00000480102 LAX1Q8IWV1 398 aa3.77□□□□□ -1.81
PTCD3-213ENST00000480102 GDPD1Q8N9F7 314 aa3.77□□□□□ -1.81
PTCD3-213ENST00000480102 CCDC71LQ8N9Z2 235 aa3.77□□□□□ -1.81
PTCD3-213ENST00000480102 KLHL30-AS1Q8NEE0 82 aa3.77□□□□□ -1.81
PTCD3-213ENST00000480102 LFNGQ8NES3 379 aa3.77□□□□□ -1.81
PTCD3-213ENST00000480102 OR1N2Q8NGR9 330 aa3.77□□□□□ -1.81
PTCD3-213ENST00000480102 OR2K2Q8NGT1 345 aa3.77□□□□□ -1.81
PTCD3-213ENST00000480102 OR52E5Q8NH55 327 aa3.77□□□□□ -1.81
PTCD3-213ENST00000480102 VN1R17PQ8TDU5 208 aa3.77□□□□□ -1.81
PTCD3-213ENST00000480102 TCTEX1D2Q8WW35 142 aa3.77□□□□□ -1.81
PTCD3-213ENST00000480102 MAFIPQ8WZ33 124 aa3.77□□□□□ -1.81
PTCD3-213ENST00000480102 CXorf58Q96LI9 332 aa3.77□□□□□ -1.81
PTCD3-213ENST00000480102 FYTTD1Q96QD9 318 aaKnown RBP3.77□□□□□ -1.81
PTCD3-213ENST00000480102 ZNF2Q9BSG1 426 aaPredicted RBP3.77□□□□□ -1.81
PTCD3-213ENST00000480102 QTRT1Q9BXR0 403 aaKnown RBP3.77□□□□□ -1.81
PTCD3-213ENST00000480102 SLC25A32Q9H2D1 315 aa3.77□□□□□ -1.81
PTCD3-213ENST00000480102 KLK15Q9H2R5 256 aa3.77□□□□□ -1.81
PTCD3-213ENST00000480102 ZNF430Q9H8G1 570 aaPredicted RBP3.77□□□□□ -1.81
PTCD3-213ENST00000480102 PARP11Q9NR21 331 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms