RNA–Protein interactions for RNA: ENST00000478702.5

GARNL3-215, Transcript of GTPase activating Rap/RanGAP domain like 3, human

TSL 4

Gene GARNL3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GARNL3-215	ENST00000478702	QTRT1	Q9BXR0	403 aa	Known RBP	12.05	□□□□□ -0.48
GARNL3-215	ENST00000478702	NXF2	Q9GZY0	626 aa	Known RBP	12.05	□□□□□ -0.48
GARNL3-215	ENST00000478702	RBM38	Q9H0Z9	239 aa	Known RBP	12.05	□□□□□ -0.48
GARNL3-215	ENST00000478702	HYDIN	Q4G0P3	5121 aa		12.05	□□□□□ -0.48
GARNL3-215	ENST00000478702	RBM14-RBM4	A0A0A0MSL8	147 aa	Known RBP	12.04	□□□□□ -0.48
GARNL3-215	ENST00000478702	BMPR1B	O00238	502 aa		12.04	□□□□□ -0.48
GARNL3-215	ENST00000478702	RAB3D	O95716	219 aa		12.04	□□□□□ -0.48
GARNL3-215	ENST00000478702	DHFR	P00374	187 aa		12.04	□□□□□ -0.48
GARNL3-215	ENST00000478702	KRAS	P01116	189 aa		12.04	□□□□□ -0.48
GARNL3-215	ENST00000478702	REG1A	P05451	166 aa		12.04	□□□□□ -0.48
GARNL3-215	ENST00000478702	FRMD6-AS1	P0C7T7	363 aa		12.04	□□□□□ -0.48
GARNL3-215	ENST00000478702	LYL1	P12980	280 aa		12.04	□□□□□ -0.48
GARNL3-215	ENST00000478702	PGAM2	P15259	253 aa		12.04	□□□□□ -0.48
GARNL3-215	ENST00000478702	G6PC	P35575	357 aa		12.04	□□□□□ -0.48
GARNL3-215	ENST00000478702	FAM209B	Q5JX69	171 aa		12.04	□□□□□ -0.48
GARNL3-215	ENST00000478702	STEAP1B	Q6NZ63	245 aa		12.04	□□□□□ -0.48
GARNL3-215	ENST00000478702	MCFD2	Q8NI22	146 aa		12.04	□□□□□ -0.48
GARNL3-215	ENST00000478702	IGLV11-55	A0A075B6I3	123 aa		12.03	□□□□□ -0.48
GARNL3-215	ENST00000478702	IGKV1-39	P01597	117 aa		12.03	□□□□□ -0.48
GARNL3-215	ENST00000478702	IGKV1D-39	P04432	117 aa		12.03	□□□□□ -0.48
GARNL3-215	ENST00000478702	SPN	P16150	400 aa		12.03	□□□□□ -0.48
GARNL3-215	ENST00000478702	HIST1H1B	P16401	226 aa	Known RBP	12.03	□□□□□ -0.48
GARNL3-215	ENST00000478702	PI3	P19957	117 aa		12.03	□□□□□ -0.48
GARNL3-215	ENST00000478702	MEF2D	Q14814	521 aa		12.03	□□□□□ -0.48
GARNL3-215	ENST00000478702	RPEL1	Q2QD12	228 aa		12.03	□□□□□ -0.48
GARNL3-215	ENST00000478702	OR6Q1	Q8NGQ2	317 aa		12.03	□□□□□ -0.48
GARNL3-215	ENST00000478702	CITED4	Q96RK1	184 aa		12.03	□□□□□ -0.48
GARNL3-215	ENST00000478702	ELOVL1	Q9BW60	279 aa		12.03	□□□□□ -0.48
GARNL3-215	ENST00000478702	FBXL7	Q9UJT9	491 aa		12.03	□□□□□ -0.48
GARNL3-215	ENST00000478702	CCDC160	A6NGH7	325 aa		12.02	□□□□□ -0.49
GARNL3-215	ENST00000478702	C15orf61	A6NNL5	157 aa		12.02	□□□□□ -0.49
GARNL3-215	ENST00000478702		H0Y980	276 aa		12.02	□□□□□ -0.49
GARNL3-215	ENST00000478702	GSTZ1	O43708	216 aa	Predicted RBP	12.02	□□□□□ -0.49
GARNL3-215	ENST00000478702	PIGP	P57054	158 aa		12.02	□□□□□ -0.49
GARNL3-215	ENST00000478702	SYNJ2BP	P57105	145 aa		12.02	□□□□□ -0.49
GARNL3-215	ENST00000478702	SCGB2B2	Q4G0G5	96 aa		12.02	□□□□□ -0.49
GARNL3-215	ENST00000478702	ZFAND6	Q6FIF0	208 aa		12.02	□□□□□ -0.49
GARNL3-215	ENST00000478702	FAAP20	Q6NZ36	180 aa		12.02	□□□□□ -0.49
GARNL3-215	ENST00000478702	HSD17B13	Q7Z5P4	300 aa	Predicted RBP	12.02	□□□□□ -0.49
GARNL3-215	ENST00000478702	OR9G4	Q8NGQ1	327 aa		12.02	□□□□□ -0.49
GARNL3-215	ENST00000478702	OR1L8	Q8NGR8	309 aa		12.02	□□□□□ -0.49
GARNL3-215	ENST00000478702	OR13C8	Q8NGS7	320 aa		12.02	□□□□□ -0.49
GARNL3-215	ENST00000478702	TERB2	Q8NHR7	220 aa		12.02	□□□□□ -0.49
GARNL3-215	ENST00000478702	MRGPRF	Q96AM1	343 aa		12.02	□□□□□ -0.49
GARNL3-215	ENST00000478702	SEC22A	Q96IW7	307 aa		12.02	□□□□□ -0.49
GARNL3-215	ENST00000478702	CCDC140	Q96MF4	163 aa		12.02	□□□□□ -0.49
GARNL3-215	ENST00000478702	OR4C12	Q96R67	309 aa		12.02	□□□□□ -0.49
GARNL3-215	ENST00000478702	TSC22D3	Q99576	134 aa		12.02	□□□□□ -0.49
GARNL3-215	ENST00000478702	NDUFA4L2	Q9NRX3	87 aa		12.02	□□□□□ -0.49
GARNL3-215	ENST00000478702	RSL24D1	Q9UHA3	163 aa	Known RBP	12.02	□□□□□ -0.49
GARNL3-215	ENST00000478702	PRND	Q9UKY0	176 aa		12.02	□□□□□ -0.49
GARNL3-215	ENST00000478702	NSG2	Q9Y328	171 aa		12.02	□□□□□ -0.49
GARNL3-215	ENST00000478702	TEX50	A0A1B0GTY4	177 aa		12.01	□□□□□ -0.49
GARNL3-215	ENST00000478702	SNAPC5	O75971	98 aa		12.01	□□□□□ -0.49
GARNL3-215	ENST00000478702	NDUFB8	O95169	186 aa		12.01	□□□□□ -0.49
GARNL3-215	ENST00000478702	IGLV1-51	P01701	117 aa		12.01	□□□□□ -0.49
GARNL3-215	ENST00000478702	AKAIN1	P0CW23	69 aa		12.01	□□□□□ -0.49
GARNL3-215	ENST00000478702	TRAPPC2	P0DI81	140 aa		12.01	□□□□□ -0.49
GARNL3-215	ENST00000478702	TRAPPC2B	P0DI82	140 aa		12.01	□□□□□ -0.49
GARNL3-215	ENST00000478702	GP9	P14770	177 aa		12.01	□□□□□ -0.49
GARNL3-215	ENST00000478702	TNFSF8	P32971	234 aa		12.01	□□□□□ -0.49
GARNL3-215	ENST00000478702	WT1-AS	Q06250	92 aa		12.01	□□□□□ -0.49
GARNL3-215	ENST00000478702	HAPLN4	Q86UW8	402 aa		12.01	□□□□□ -0.49
GARNL3-215	ENST00000478702	GDPD1	Q8N9F7	314 aa		12.01	□□□□□ -0.49
GARNL3-215	ENST00000478702	OR10W1	Q8NGF6	305 aa		12.01	□□□□□ -0.49
GARNL3-215	ENST00000478702	OR4C16	Q8NGL9	310 aa		12.01	□□□□□ -0.49
GARNL3-215	ENST00000478702	OR5B3	Q8NH48	314 aa		12.01	□□□□□ -0.49
GARNL3-215	ENST00000478702	LSM10	Q969L4	123 aa	Known RBP	12.01	□□□□□ -0.49
GARNL3-215	ENST00000478702	SOST	Q9BQB4	213 aa		12.01	□□□□□ -0.49
GARNL3-215	ENST00000478702	PALMD	Q9NP74	551 aa		12.01	□□□□□ -0.49
GARNL3-215	ENST00000478702	TMEM14B	Q9NUH8	114 aa		12.01	□□□□□ -0.49
GARNL3-215	ENST00000478702	OR51B2	Q9Y5P1	312 aa		12.01	□□□□□ -0.49
GARNL3-215	ENST00000478702	DMRT1	Q9Y5R6	373 aa		12.01	□□□□□ -0.49
GARNL3-215	ENST00000478702	MFSD2B	A6NFX1	497 aa		12	□□□□□ -0.49
GARNL3-215	ENST00000478702	DBX1	A6NMT0	343 aa		12	□□□□□ -0.49
GARNL3-215	ENST00000478702	PPP5D1	E7EU14	171 aa		12	□□□□□ -0.49
GARNL3-215	ENST00000478702	ZNF701	M0R085	212 aa	Predicted RBP	12	□□□□□ -0.49
GARNL3-215	ENST00000478702	CTSD	P07339	412 aa	Predicted RBP	12	□□□□□ -0.49
GARNL3-215	ENST00000478702	DEFA4	P12838	97 aa		12	□□□□□ -0.49
GARNL3-215	ENST00000478702	IL34	Q6ZMJ4	242 aa		12	□□□□□ -0.49
GARNL3-215	ENST00000478702	CCDC71L	Q8N9Z2	235 aa		12	□□□□□ -0.49
GARNL3-215	ENST00000478702	ZFAND1	Q8TCF1	268 aa		12	□□□□□ -0.49
GARNL3-215	ENST00000478702	MARCH1	Q8TCQ1	289 aa		12	□□□□□ -0.49
GARNL3-215	ENST00000478702	EEF1AKMT3	Q96AZ1	226 aa		12	□□□□□ -0.49
GARNL3-215	ENST00000478702	TP53RK	Q96S44	253 aa		12	□□□□□ -0.49
GARNL3-215	ENST00000478702	TM2D3	Q9BRN9	247 aa		12	□□□□□ -0.49
GARNL3-215	ENST00000478702	ZMAT4	Q9H898	229 aa		12	□□□□□ -0.49
GARNL3-215	ENST00000478702	EDA2R	Q9HAV5	297 aa		12	□□□□□ -0.49
GARNL3-215	ENST00000478702	ANKRD20A5P	A0PJZ0	165 aa		11.99	□□□□□ -0.49
GARNL3-215	ENST00000478702	DISC1	C4P0D8	188 aa		11.99	□□□□□ -0.49
GARNL3-215	ENST00000478702	SERPINE2	P07093	398 aa		11.99	□□□□□ -0.49
GARNL3-215	ENST00000478702	OR13C7	P0DN81	318 aa		11.99	□□□□□ -0.49
GARNL3-215	ENST00000478702	SURF2	Q15527	256 aa	Predicted RBP	11.99	□□□□□ -0.49
GARNL3-215	ENST00000478702	H2BFWT	Q7Z2G1	175 aa		11.99	□□□□□ -0.49
GARNL3-215	ENST00000478702	HINT2	Q9BX68	163 aa		11.99	□□□□□ -0.49
GARNL3-215	ENST00000478702	SLC2A8	Q9NY64	477 aa		11.99	□□□□□ -0.49
GARNL3-215	ENST00000478702	FKBP11	Q9NYL4	201 aa		11.99	□□□□□ -0.49
GARNL3-215	ENST00000478702	COPZ2	Q9P299	210 aa		11.99	□□□□□ -0.49
GARNL3-215	ENST00000478702		S4R3C0	116 aa		11.99	□□□□□ -0.49
GARNL3-215	ENST00000478702	C3orf85	A0A1B0GTC6	90 aa		11.98	□□□□□ -0.49

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