RNA–Protein interactions for RNA: ENST00000477649.1

VMA21-203, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 3

Gene VMA21, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-203ENST00000477649 RUNX1Q01196 453 aa6.43□□□□□ -1.38
VMA21-203ENST00000477649 BSXQ3C1V8 233 aa6.43□□□□□ -1.38
VMA21-203ENST00000477649 UTF1Q5T230 341 aa6.43□□□□□ -1.38
VMA21-203ENST00000477649 LCE1DQ5T752 114 aa6.43□□□□□ -1.38
VMA21-203ENST00000477649 SP5Q6BEB4 398 aaPredicted RBP6.43□□□□□ -1.38
VMA21-203ENST00000477649 VKORC1L1Q8N0U8 176 aa6.43□□□□□ -1.38
VMA21-203ENST00000477649 OR4P4Q8NGL7 312 aa6.43□□□□□ -1.38
VMA21-203ENST00000477649 RNASEH2CQ8TDP1 164 aaKnown RBP6.43□□□□□ -1.38
VMA21-203ENST00000477649 SFT2D1Q8WV19 159 aa6.43□□□□□ -1.38
VMA21-203ENST00000477649 BBC3Q96PG8 261 aaPredicted RBP6.43□□□□□ -1.38
VMA21-203ENST00000477649 P2RX4Q99571 388 aa6.43□□□□□ -1.38
VMA21-203ENST00000477649 C19orf24Q9BVV8 132 aa6.43□□□□□ -1.38
VMA21-203ENST00000477649 NPCDR1Q9BY65 106 aa6.43□□□□□ -1.38
VMA21-203ENST00000477649 EIF5A2Q9GZV4 153 aaKnown RBP6.43□□□□□ -1.38
VMA21-203ENST00000477649 SLC35B3Q9H1N7 401 aa6.43□□□□□ -1.38
VMA21-203ENST00000477649 ZFAND3Q9H8U3 227 aa6.43□□□□□ -1.38
VMA21-203ENST00000477649 RPRMQ9NS64 109 aa6.43□□□□□ -1.38
VMA21-203ENST00000477649 ONECUT1Q9UBC0 465 aa6.43□□□□□ -1.38
VMA21-203ENST00000477649 POLR3KQ9Y2Y1 108 aaPredicted RBP6.43□□□□□ -1.38
VMA21-203ENST00000477649 TRAV3A0A0B4J244 114 aa6.42□□□□□ -1.38
VMA21-203ENST00000477649 IGHV1-3A0A0C4DH29 117 aa6.42□□□□□ -1.38
VMA21-203ENST00000477649 RBFOX3A6NFN3 312 aa6.42□□□□□ -1.38
VMA21-203ENST00000477649 C22orf46C9J442 243 aa6.42□□□□□ -1.38
VMA21-203ENST00000477649 ACTL6BO94805 426 aa6.42□□□□□ -1.38
VMA21-203ENST00000477649 CA2P00918 260 aa6.42□□□□□ -1.38
VMA21-203ENST00000477649 SFTA3P0C7M3 94 aa6.42□□□□□ -1.38
VMA21-203ENST00000477649 DEFA5Q01523 94 aa6.42□□□□□ -1.38
VMA21-203ENST00000477649 PAX2Q02962 417 aa6.42□□□□□ -1.38
VMA21-203ENST00000477649 HABP2Q14520 560 aaPredicted RBP6.42□□□□□ -1.38
VMA21-203ENST00000477649 ZNF506Q5JVG8 444 aa6.42□□□□□ -1.38
VMA21-203ENST00000477649 TPTE2P1Q5T6R2 138 aa6.42□□□□□ -1.38
VMA21-203ENST00000477649 ETFRF1Q6IPR1 90 aa6.42□□□□□ -1.38
VMA21-203ENST00000477649 SPSB3Q6PJ21 355 aa6.42□□□□□ -1.38
VMA21-203ENST00000477649 TEPPQ6URK8 271 aa6.42□□□□□ -1.38
VMA21-203ENST00000477649 TMEM144Q7Z5S9 345 aa6.42□□□□□ -1.38
VMA21-203ENST00000477649 MOB3BQ86TA1 216 aa6.42□□□□□ -1.38
VMA21-203ENST00000477649 LINC00528Q8N1L1 170 aa6.42□□□□□ -1.38
VMA21-203ENST00000477649 OR1L6Q8NGR2 347 aa6.42□□□□□ -1.38
VMA21-203ENST00000477649 NANPQ8TBE9 248 aa6.42□□□□□ -1.38
VMA21-203ENST00000477649 IGFBPL1Q8WX77 278 aa6.42□□□□□ -1.38
VMA21-203ENST00000477649 TXNDC17Q9BRA2 123 aa6.42□□□□□ -1.38
VMA21-203ENST00000477649 RSG1Q9BU20 258 aa6.42□□□□□ -1.38
VMA21-203ENST00000477649 MANBALQ9NQG1 85 aa6.42□□□□□ -1.38
VMA21-203ENST00000477649 SLC39A9Q9NUM3 307 aa6.42□□□□□ -1.38
VMA21-203ENST00000477649 TBL2Q9Y4P3 447 aaKnown RBP6.42□□□□□ -1.38
VMA21-203ENST00000477649 LSM4Q9Y4Z0 139 aaKnown RBP6.42□□□□□ -1.38
VMA21-203ENST00000477649 USF3Q68DE3 2245 aa6.42□□□□□ -1.38
VMA21-203ENST00000477649 ICE1Q9Y2F5 2266 aa6.42□□□□□ -1.38
VMA21-203ENST00000477649 MAST4O15021 2626 aa6.42□□□□□ -1.38
VMA21-203ENST00000477649 ARID1AO14497 2285 aa6.41□□□□□ -1.38
VMA21-203ENST00000477649 A0A1W2PPR1 153 aa6.41□□□□□ -1.38
VMA21-203ENST00000477649 ODF3BA8MYP8 253 aa6.41□□□□□ -1.38
VMA21-203ENST00000477649 SEC14L6B5MCN3 397 aa6.41□□□□□ -1.38
VMA21-203ENST00000477649 FAM157AC9JC47 383 aa6.41□□□□□ -1.38
VMA21-203ENST00000477649 C19orf84I3L1E1 186 aa6.41□□□□□ -1.38
VMA21-203ENST00000477649 RRHO14718 337 aa6.41□□□□□ -1.38
VMA21-203ENST00000477649 AGPAT2O15120 278 aa6.41□□□□□ -1.38
VMA21-203ENST00000477649 C1QL1O75973 258 aa6.41□□□□□ -1.38
VMA21-203ENST00000477649 MT-CO2P00403 227 aa6.41□□□□□ -1.38
VMA21-203ENST00000477649 IGLV2-23P01705 113 aa6.41□□□□□ -1.38
VMA21-203ENST00000477649 PAX1P15863 534 aa6.41□□□□□ -1.38
VMA21-203ENST00000477649 CDKN1AP38936 164 aa6.41□□□□□ -1.38
VMA21-203ENST00000477649 RPL29P47914 159 aaKnown RBP6.41□□□□□ -1.38
VMA21-203ENST00000477649 REG1BP48304 166 aa6.41□□□□□ -1.38
VMA21-203ENST00000477649 PSMB3P49720 205 aa6.41□□□□□ -1.38
VMA21-203ENST00000477649 FHITP49789 147 aa6.41□□□□□ -1.38
VMA21-203ENST00000477649 PRSS8Q16651 343 aa6.41□□□□□ -1.38
VMA21-203ENST00000477649 FFAR4Q5NUL3 377 aa6.41□□□□□ -1.38
VMA21-203ENST00000477649 PNKDQ8N490 385 aa6.41□□□□□ -1.38
VMA21-203ENST00000477649 Q8N7P7 452 aa6.41□□□□□ -1.38
VMA21-203ENST00000477649 ZNF114Q8NC26 417 aa6.41□□□□□ -1.38
VMA21-203ENST00000477649 OR10G9Q8NGN4 311 aa6.41□□□□□ -1.38
VMA21-203ENST00000477649 OR10G7Q8NGN6 311 aa6.41□□□□□ -1.38
VMA21-203ENST00000477649 CLDND2Q8NHS1 167 aa6.41□□□□□ -1.38
VMA21-203ENST00000477649 RCC1LQ96I51 464 aaKnown RBP6.41□□□□□ -1.38
VMA21-203ENST00000477649 SLC35E1Q96K37 410 aa6.41□□□□□ -1.38
VMA21-203ENST00000477649 PIMREGQ9BSJ6 248 aa6.41□□□□□ -1.38
VMA21-203ENST00000477649 SCRT1Q9BWW7 348 aa6.41□□□□□ -1.38
VMA21-203ENST00000477649 HINT2Q9BX68 163 aa6.41□□□□□ -1.38
VMA21-203ENST00000477649 NKX6-2Q9C056 277 aaPredicted RBP6.41□□□□□ -1.38
VMA21-203ENST00000477649 NARFLQ9H6Q4 476 aa6.41□□□□□ -1.38
VMA21-203ENST00000477649 LPAR2Q9HBW0 351 aa6.41□□□□□ -1.38
VMA21-203ENST00000477649 IGHV2-70DA0A0C4DH43 119 aa6.4□□□□□ -1.38
VMA21-203ENST00000477649 A0A1W2PPV4 95 aa6.4□□□□□ -1.38
VMA21-203ENST00000477649 SMCO3A2RU48 225 aa6.4□□□□□ -1.38
VMA21-203ENST00000477649 MAP1LC3B2A6NCE7 125 aa6.4□□□□□ -1.38
VMA21-203ENST00000477649 CRYGBP07316 175 aa6.4□□□□□ -1.38
VMA21-203ENST00000477649 SNRNP70P08621 437 aaKnown RBP6.4□□□□□ -1.38
VMA21-203ENST00000477649 RNASE2P10153 161 aaKnown RBP6.4□□□□□ -1.38
VMA21-203ENST00000477649 BCL2P10415 239 aa6.4□□□□□ -1.38
VMA21-203ENST00000477649 COX7A1P24310 79 aa6.4□□□□□ -1.38
VMA21-203ENST00000477649 RPL27AP46776 148 aaKnown RBP6.4□□□□□ -1.38
VMA21-203ENST00000477649 UBE2E1P51965 193 aa6.4□□□□□ -1.38
VMA21-203ENST00000477649 LGALS4P56470 323 aa6.4□□□□□ -1.38
VMA21-203ENST00000477649 ARF6P62330 175 aa6.4□□□□□ -1.38
VMA21-203ENST00000477649 CD69Q07108 199 aa6.4□□□□□ -1.38
VMA21-203ENST00000477649 SSX2Q16385 188 aa6.4□□□□□ -1.38
VMA21-203ENST00000477649 SPINK9Q5DT21 86 aa6.4□□□□□ -1.38
VMA21-203ENST00000477649 SOHLH1Q5JUK2 328 aa6.4□□□□□ -1.38
VMA21-203ENST00000477649 PVRIGQ6DKI7 326 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms